rbbt-sources 3.1.37 → 3.1.38
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/sources/organism.rb +13 -0
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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---
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2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: f0b45df8e4ef43f18147f001595817df05dddc6ef3b43dcea3b7c17a1d379163
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4
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data.tar.gz: 3b1ac66222ca9dd9d0342f97917cc3d969fc566b2c068a319101ec6fe7133f58
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5
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SHA512:
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-
metadata.gz:
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7
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-
data.tar.gz:
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6
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metadata.gz: b75e51b2338a0b3c55545ba788db502156126327ed920f86e448fbe239c2bb2f5a053b1009dd8e42bd7e6f425614e504c83a8ea894b070a07e9275fb1e5ea399
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7
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data.tar.gz: 35b7852629a3dc69df65d8e3c226c4995051a2dd7e0a4435f485c947014e88ee9a97455f7270de902d0058db0a4d55315731e29ce2195cb0b79ceef390d92676
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@@ -91,6 +91,19 @@ module Organism
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91
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end
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end
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94
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+
def self.organism_for_build(build)
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95
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case build.to_s
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96
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when 'hg18'
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97
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"Hsa/may2008"
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98
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when 'hg19', 'b37'
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99
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"Hsa/feb2014"
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when 'hg38'
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101
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"Hsa/may2017"
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102
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else
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103
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raise RbbtException, "Unknown organism build #{build}"
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104
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end
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105
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end
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+
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94
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def self.liftOver(positions, source, target)
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95
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source_hg = hg_build(source)
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: rbbt-sources
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version: !ruby/object:Gem::Version
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4
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-
version: 3.1.
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4
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+
version: 3.1.38
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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11
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-
date: 2019-05-
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11
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+
date: 2019-05-22 00:00:00.000000000 Z
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dependencies:
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13
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- !ruby/object:Gem::Dependency
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name: rbbt-util
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