rbbt-sources 3.0.3 → 3.0.4

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
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-  data.tar.gz: 837d1281d60d46d97690eaefb36dcfa1e5636636
+  metadata.gz: 8db9d47e44f4e4ab79e5568922226aabf9f8f96c
+  data.tar.gz: 97e7b44d98556d925bc569aae4c4972dcf99cc95
 SHA512:
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data/lib/rbbt/sources/kegg.rb

@@ -110,11 +110,11 @@ if defined? Entity
           self 
         when format == "KEGG Gene ID"
           ensembl = from_kegg.clean_annotations
-          Gene.setup(Translation.job(:tsv_translate, "", :organism => organism, :genes => ensembl, :format => new_format).run.chunked_values_at(ensembl), new_format, organism).tap{|o| o.extend AnnotatedArray if AnnotatedArray === self }
+          Gene.setup(Translation.job(:tsv_translate, "", :organism => organism, :genes => ensembl, :format => new_format).exec.chunked_values_at(ensembl), new_format, organism).tap{|o| o.extend AnnotatedArray if AnnotatedArray === self }
         when new_format == "KEGG Gene ID"
           to_kegg
         else
-          Gene.setup(Translation.job(:tsv_translate, "", :organism => organism, :genes => self, :format => new_format).run.chunked_values_at(self), new_format, organism).tap{|o| o.extend AnnotatedArray if AnnotatedArray === self }
+          Gene.setup(Translation.job(:tsv_translate, "", :organism => organism, :genes => self, :format => new_format).exec.chunked_values_at(self), new_format, organism).tap{|o| o.extend AnnotatedArray if AnnotatedArray === self }
         end
       end
 

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: rbbt-sources
 version: !ruby/object:Gem::Version
-  version: 3.0.3
+  version: 3.0.4
 platform: ruby
 authors:
 - Miguel Vazquez
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2014-04-14 00:00:00.000000000 Z
+date: 2014-05-27 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rbbt-util