rbbt-dm 1.1.44 → 1.1.45
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/rbbt/matrix.rb +20 -0
- metadata +2 -2
checksums.yaml
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@@ -1,7 +1,7 @@
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---
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 3d0fe8cd4d9acfbef39eab9bb2cc6537dc4846b8
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data.tar.gz: 0f373711bbd5c67c072012570b67301336082df3
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 03f79f5464f66d147ca1e86fa30a86d911dc84e6a2766e13c7a04be1141405e9f46e545e76f04283a765b168c79b37ecde140bee096c9ce85604ada8cd5176db
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data.tar.gz: 5e3aea0ec0e1c5683ac177e830883c4987dedd524353e14124148edc3c87181374a20a09c7b41c37c1bdb68e89efe0708fb532d3bc90f1403b4eb61bec8c87f4
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data/lib/rbbt/matrix.rb
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@@ -176,6 +176,26 @@ class RbbtMatrix
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matrix
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end
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def to_name(identifiers = nil)
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require 'rbbt/tsv/change_id'
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name = data_file =~ /:>/ ? File.basename(data_file) : data_file
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file = Persist.persist(data_file, :tsv, :prefix => "Name", :check => [data_file], :dir => RbbtMatrix.matrix_dir.values, :no_load => true) do
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data = data_file.tsv(:cast => :to_f)
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identifiers = [identifiers, @identifiers, data.identifiers, Organism.identifiers(organism)].flatten.compact.uniq
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data.change_key("Associated Gene Name", :identifiers => identifiers.reverse) do |v|
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Misc.mean(v.compact)
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end
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end
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subsets = self.subsets
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matrix = RbbtMatrix.new file, labels, value_type, "Associated Gene Name", organism
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matrix.subsets = subsets
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matrix
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end
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def to_barcode_ruby(factor = 2)
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name = data_file =~ /:>/ ? File.basename(data_file) : data_file
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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--- !ruby/object:Gem::Specification
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name: rbbt-dm
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version: !ruby/object:Gem::Version
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version: 1.1.
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version: 1.1.45
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platform: ruby
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authors:
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- Miguel Vazquez
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autorequire:
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bindir: bin
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cert_chain: []
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date:
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date: 2019-03-24 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rbbt-util
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