rabbit-slide-kou-scipy-japan-2019 2019.4.23.0

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data/.rabbit

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+--size=800,450 apache-arrow.rab

data/README.rd

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+= Apache Arrow - A cross-language development platform for in-memory data
+
+Apache Arrow is the future for data processing systems. This talk
+describes how to solve data sharing overhead in data processing system
+such as Spark and PySpark. This talk also describes how to accelerate
+computation against your large data by Apache Arrow.
+
+== License
+
+=== Slide
+
+CC BY-SA 4.0
+
+Use the followings for notation of the author:
+
+  * Kouhei Sutou
+
+==== ClearCode Inc. logo
+
+CC BY-SA 4.0
+
+Author: ClearCode Inc.
+
+It is used in page header and some pages in the slide.
+
+==== Performance figure
+
+Apache License 2.0
+
+Author: The Apache Software Foundation
+
+== For author
+
+=== Show
+
+  rake
+
+=== Publish
+
+  rake publish
+
+== For viewers
+
+=== Install
+
+  gem install rabbit-slide-kou-scipy-japan-2019
+
+=== Show
+
+  rabbit rabbit-slide-kou-scipy-japan-2019.gem
+

data/Rakefile

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+require "rabbit/task/slide"
+
+# Edit ./config.yaml to customize meta data
+
+spec = nil
+Rabbit::Task::Slide.new do |task|
+  spec = task.spec
+  # spec.files += Dir.glob("doc/**/*.*")
+  # spec.files -= Dir.glob("private/**/*.*")
+  spec.add_runtime_dependency("rabbit-theme-clear-code")
+end
+
+desc "Tag #{spec.version}"
+task :tag do
+  sh("git", "tag", "-a", spec.version.to_s, "-m", "Publish #{spec.version}")
+  sh("git", "push", "--tags")
+end

data/apache-arrow.rab

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+= Apache Arrow
+
+: subtitle
+   A cross-language development platform\nfor in-memory data
+: author
+   Kouhei Sutou
+: institution
+   ClearCode Inc.
+: content-source
+   SciPy Japan 2019
+: date
+   2019-04-23
+: start-time
+   2019-04-23T14:30:00+09:00
+: end-time
+   2019-04-23T14:55:00+09:00
+: theme
+   .
+
+= Me
+
+Ruby committer since 2004\n
+(('note:2004年からRubyコミッター'))
+
+= Why do I talk at SciPy?\n(('note:なぜSciPyで話しているのか？'))
+
+To introduce\n
+((*Apache Arrow*))\n
+(('note:((*Apache Arrow*))を紹介するため'))
+
+= Apache Arrow
+
+  # blockquote
+  # title = https://arrow.apache.org/
+
+  A cross-language development platform for in-memory data\n
+  (('note:インメモリーデータ向け多言語対応開発プラットフォーム'))
+
+= Cross-language\n(('note:多言語対応'))
+
+  * C, C++, C#, Go, Java,
+  * JavaScript, MATLAB, ((*Python*)),
+  * R, ((*Ruby*)) and Rust
+
+= Development platform\n(('note:開発プラットフォーム'))
+
+Apache Arrow ...
+
+  * specifies standards and\n
+    (('note:標準化'))
+  * provides implementations\n
+    (('note:実装'))
+
+to advance cooperation by many people\n
+(('note:多くの人が協力できるように'))
+
+= For in-memory data\n(('note:インメモリーデータ'))
+
+Apache Arrow focuses on ↓ ((*for now*))\n
+(('note:Apache Arrowは((*今のところ*))は↓に注力'))
+
+  * sharing columnar/tensor data\n
+    (('note:カラムナーデータ・テンソルデータの共有'))
+  * analyzing columnar data\n
+    (('note:カラムナーデータの分析'))
+  * RPC for columnar data\n
+    (('note:カラムナーデータのRPC'))
+
+= Apache Arrow and Python\n(('note:Apache ArrowとPython'))
+
+  * As pickle replacement\n
+    (('note:pickleの代替'))
+    * PySpark does\n
+      (('note:PySparkはすでにやっている'))
+  * As dataframe library\n
+    (('note:データフレームライブラリー'))
+    * pandas and Vaes use Apache Arrow a bit\n
+      (('note:pandasとVaesはApache Arrowを少し使っている'))
+
+= Apache Arrow and me\n(('note:Apache Arrowと私'))
+
+    # image
+    # src = images/apache-arrow-and-me.svg
+    # align = right
+    # vertical-align = bottom
+    # relative-width = 65
+    # relative-margin-right = 20
+    # relative-padding-bottom = -15
+
+  * A release manager(('note:（リリースマネージャー）'))
+    * 0.11.0 and 0.13.0 (('note:(the latest release/最新リリース)'))
+  * An active developer(('note:（アクティブな開発者）'))
+
+(('tag:margin-top * 10'))
+
+= Feature (1)\n(('note:機能（1）'))
+
+Effective serialization\n
+(('note:効率的なシリアライズ'))
+
+= Why effective?\n(('note:なぜ効率的なのか'))
+
+  * Don't parse data\n
+    (('note:データをパースしないから'))
+  * Use data directly\n
+    (('note:データをそのまま使うから'))
+
+= Data format: Number\n(('note:データフォーマット：数値'))
+
+  Contiguous data (Same as C array)
+  連続データ（Cの配列と同じ）
+
+  32bit integer: [1, 2, 3]
+  0x01 0x00 0x00 0x00 0x02 0x00 0x00 0x00 0x03 ...
+
+= Compare to JSON\n(('note:JSONと比較'))
+
+  　　　　"[1, 2, 3]"
+              ↓
+  "1" → 1 (String → Number)
+  "2" → 2 (String → Number)
+  "3" → 3 (String → Number)
+
+= Merit of direct data use\n(('note:データを直接使うことのメリット'))
+
+  * Zero copy cost\n
+    (('note:コピーコストをなくせる'))
+    * Copy is costly for large data\n
+      (('note:大きなデータではコピーはコストが高い'))
+  * (Nearly) zero parse cost\n
+    (('note:（ほぼ）パースコストをなくせる'))
+    * Only need to parse metadata\n
+      (('note:メタデータをパースするだけでよい'))
+
+= Performance\n(('note:性能'))
+
+  # image
+  # src = images/serialize-list.png
+  # relative_height = 77
+
+(('note:((<Fast Python Serialization with Ray and Apache Arrow|URL:https://arrow.apache.org/blog/2017/10/15/fast-python-serialization-with-ray-and-arrow/>))'))
+
+(('note:Apache License 2.0: (c) 2016-2019 The Apache Software Foundation'))
+
+= Zero copy and large data\n(('note:ゼロコピーと大きなデータ'))
+
+  * pandas can't process large data\n
+    (('note:pandasは大きなデータを扱えない'))
+    * Because it needs to allocate memory\n
+      (('note:メモリーを確保する必要があるから'))
+  * Apache Arrow supports memory mapping\n
+    (('note:Apache Arrowはメモリーマッピング対応'))
+    * Can use data in file directly without copy\n
+      (('note:ファイル内のデータをコピーせずに使える'))
+
+= Effective string representation\n(('note:効率的な文字列表現'))
+
+  * pandas: Array of strings\n
+    (('note:pandas：文字列の配列'))
+    * Use discontiguous memory\n
+      (('note:非連続なメモリーを使う'))
+  * Apache Arrow: Data and array of lengths\n
+    (('note:Apache Arrow：データと長さの配列'))
+    * Use contiguous memory: Fast\n
+      (('note:連続したメモリーを使う：速い'))
+
+= Data format: String\n(('note:データフォーマット：文字列'))
+
+  Data bytes + length array
+
+  UTT-8 string: ["Hello", "", "!"]
+  Data bytes: "Hello!"
+  Length array: [0, 5, 5, 6]
+  i-th length: lengths[i+1] - lengths[i]
+  i-th data： data[lengths[i]:lengths[i+1]]
+
+= Feature(?) (2)\n(('note:機能（？）（2）'))
+
+Specify data format\n
+(('note:データフォーマットを仕様化'))
+
+= Why do Arrow specify?\n(('note:なぜArrowは仕様化するのか'))
+
+Effective\n
+data exchange\n
+(('note:効率的なデータ交換のため'))
+
+= Effective data exchange\n(('note:効率的なデータ交換'))
+
+  * Use common format widely\n
+    (('note:みんなが同じフォーマットを使うこと'))
+    * No format conversion reduces resource usage\n
+      (('note:フォーマットを変換しなくてよいならリソース使用量を減らせる'))
+  * Use low {,de}serialize cost format\n
+    (('note:シリアライズコストが低いフォーマットを使うこと'))
+    * Fast
+
+= Who uses Arrow format?\n(('note:Arrowフォーマットをだれが使っているか'))
+
+  * ((<RAPIDS|URL:https://rapids.ai/>)): For NVIDIA GPU
+  * ((<Fletcher|URL:https://github.com/johanpel/fletcher>)), ((<InAccel|URL:https://docs.inaccel.com/latest/manager/examples/#logistic-regression-with-apache-arrow>)): For FPGA
+  * ((<Spark|URL:https://spark.apache.org/>)): For interprocess data exchange\n
+    (('note:Spark：プロセス間のデータ交換のために'))
+
+= CPU and GPU
+
+  * Can't share data on memory\n
+    (('note:メモリー上のデータを共有できない'))
+  * Need to copy between CPU and GPU\n
+    (('note:CPUとGPU間でコピーする必要がある'))
+    * Effective data exchange improves performance\n
+      (('note:データ交換を効率化することで高速化'))
+
+= CPU and FPGA
+
+  * Can't share data on memory\n
+    (('note:メモリー上のデータを共有できない'))
+  * Need to copy between CPU and FPGA\n
+    (('note:CPUとFPGA間でコピーする必要がある'))
+    * Effective data exchange improves performance\n
+      (('note:データ交換を効率化することで高速化'))
+
+= Spark
+
+  * Process large data\n
+    (('note:大きなデータを処理'))
+  * Need to pass data to worker processes\n
+    (('note:ワーカープロセスにデータを渡す必要がある'))
+    * Effective data exchange improves performance\n
+      (('note:データ交換を効率化することで高速化'))
+
+= PySpark
+
+  * Worker by Python\n
+    (('note:ワーカーはPython'))
+    * Use pikcle to exchange data\n
+      (('note:データ交換にpickleを使用'))
+  * Spark supports Arrow for data exchange\n
+    (('note:Arrowを使ったデータ交換をサポート'))
+    * Disabled by default\n
+      (('note:デフォルトでは無効'))
+
+= PySpark with Arrow
+
+  In [2]: %time pdf = df.toPandas()
+  CPU times: user 17.4 s, sys: 792 ms, total: 18.1 s
+  Wall time: 20.7 s
+
+  In [3]: spark.conf.set("spark.sql.execution.arrow.enabled", "true")
+
+  In [4]: %time pdf = df.toPandas()
+  CPU times: user 40 ms, sys: 32 ms, total: 72 ms
+  Wall time: 737 ms
+
+(('note:((< Speeding up PySpark with Apache Arrow|URL:https://arrow.apache.org/blog/2017/07/26/spark-arrow/>))'))
+
+= Feature (3)\n(('note:機能（3）'))
+
+Optimized\n
+data processing\n
+modules\n
+(('note:最適化されたデータ処理モジュール'))
+
+= Optimized data processing\n(('note:最適化されたデータ処理モジュール'))
+
+  * Apache Arrow targets large data\n
+    (('note:Apache Arrowは大きなデータを対象にしている'))
+    * Performance is important\n
+      (('note:性能は重要'))
+  * How to get high performance...?\n
+    (('note:どうすれば速くできる。。。？'))
+
+= High performance (1)\n(('note:高速化（1）'))
+
+Data locality\n
+(('note:データを局所化'))
+
+= Data locality\n(('note:データを局所化'))
+
+  * Minimize cache misses\n
+    (('note:キャッシュミスを減らす'))
+  * Storage is very slow\n
+    (('note:ストレージはすごく遅い'))
+  * Memory is slow\n
+    (('note:メモリーは遅い'))
+  * CPU cache is fast\n
+    (('note:CPUキャッシュは速い'))
+
+= High performance (2)\n(('note:高速化（2）'))
+
+SIMD\n
+(('note:Single Instruction Multi Data'))\n
+(('note:一気に複数のデータを処理する方法'))
+
+= SIMD
+
+  * Data must be contiguous and aligned\n
+    (('note:データは連続していてアラインされていないといけない'))
+    * Arrow format is SIMD ready\n
+      (('note:ArrowフォーマットはSIMDを使える'))
+  * No condition branch\n
+    (('note:条件分岐がないこと'))
+    * Use bitmap instead of "missing" for null\n
+      (('note:nullを表現するために「欠損値」ではなく別途ビットマップを使う'))\n
+      (('note:((<"Is it time to stop using sentinel values for null / NA values?"|URL:http://wesmckinney.com/blog/bitmaps-vs-sentinel-values/>))'))
+
+= No condition branch\n(('note:条件分岐なし'))
+
+  # img
+  # src = images/simd-null.svg
+  # relative_height = 100
+
+== Slide property
+
+: enable-title-on-image
+   false
+
+= FYI: null\n(('note:参考情報：null'))
+
+  * All data types support null in Arrow\n
+    (('note:Arrowはすべての型でnullをサポート'))
+  * Some types only support null in NumPy\n
+    (('note:NumPyは一部の型でnullをサポート'))\n
+    (('note:((<欠損値の制約 - PythonとApache Arrow|URL:https://speakerdeck.com/sinhrks/pythontoapache-arrow-eaf72479-ce30-4161-8c73-15b555cc56c7?slide=11>))'))
+
+= High performance (3)\n(('note:高速化（3）'))
+
+Thread
+
+= Thread
+
+  * Use multi-cores in single process\n
+    (('note:シングルプロセスで複数コアを使う'))
+  * Minimize resource conflict\n
+    (('note:リソースの競合をなくすこと'))
+    * Locking to avoid conflict reduces performance\n
+      (('note:競合を避けるためにロックすると性能劣化'))
+  * Approaches(('note:（アプローチ）'))
+    * Read only or copy (shared nothing)\n
+      (('note:リードオンリーにするかコピー（なにも共有しない）'))
+
+= Apache Arrow and thread\n(('note:Apache Arrowとスレッド'))
+
+  * Data is read only\n
+    (('note:データはリードオンリー'))
+    * Share data in threads without lock overhead\n
+      (('note:ロックのオーバーヘッドなしでスレッド間でデータを共有'))
+  * Avoid both locking and copying\n
+    (('note:ロックもコピーも避ける'))
+    * They reduce performance\n
+      (('note:どちらも性能劣化するから'))
+
+= High performance (4)\n(('note:高速化（4）'))
+
+Compute kernels\n
+(('note:計算カーネル'))
+
+= Compute kernels\n(('note:計算カーネル'))
+
+  * SIMD ready primitive operations\n
+    (('note:SIMDを使ったプリミティブな演算'))
+  * Projection, Filter, Aggregation, ...\n
+    (('note:射影とかフィルターとか集計とかとか'))
+    * compare, take, mean, ...\n
+      (('note:比較とか行選択とか平均とか'))
+
+= High performance (5)\n(('note:高速化（5）'))
+
+Subgraph compiler\n
+(('note:サブグラフコンパイラー'))
+
+= Subgraph compiler: Gandiva\n(('note:サブグラフコンパイラー：Gandiva'))
+
+  * Compile operator graphs at run-time\n
+    (('note:実行時に演算グラフをコンパイル'))
+    * Operator graph: combined multiple operations\n
+      (('note:演算グラフ：演算のまとまり'))
+    * (({table.a + table.b < table.c && ...}))
+  * Usable for query engine backend\n
+    (('note:クエリーエンジンのバックエンドとして使える'))
+
+= High performance (6)\n(('note:高速化（6）'))
+
+Query engine\n
+(('note:クエリーエンジン'))
+
+= Query engine\n(('note:クエリーエンジン'))
+
+  * For single node\n
+    (('note:シングルノード向け'))
+  * Dataflow-style operator execution\n
+    (('note:データが流れるように演算を実行'))
+    * scan → project → filter → aggregate → ...\n
+      (('note:データ取得→射影→フィルター→集計→…'))
+
+(('note:((<Apache Arrow Query Engine for C++|URL:https://docs.google.com/document/d/10RoUZmiMQRi_J1FcPeVAUAMJ6d_ZuiEbaM2Y33sNPu4/edit#>))'))
+
+= Query engine from Python\n(('note:Pythonからクエリーエンジンを使う'))
+
+  * With pandas(('note:（pandasと使う）'))
+    * Large data → execute → (({to_pandas()}))\n
+      (('note:大きなデータ→実行→(({to_pandas()}))'))
+  * With Dask(('note:（Daskと使う）'))
+    * Dask will be able to use this as backend\n
+      (('note:Daskのバックエンドで使えるかも？'))
+
+= High performance (7)\n(('note:高速化（7）'))
+
+Datasets\n
+(('note:データセット'))
+
+= Datasets\n(('note:データセット'))
+
+  * Scan data from storage/database\n
+    (('note:ストレージ・データベースからデータ取得'))
+    * File systems: local, HDFS, ...
+    * Formats: CSV, Parquet, ...
+    * Databases: MySQL, PostgreSQL, ...
+
+(('note:((<Apache Arrow C++ Datasets|URL:https://docs.google.com/document/d/1bVhzifD38qDypnSjtf8exvpP3sSB5x_Kw9m-n66FB2c/edit#heading=h.22aikbvt54fv>))'))
+
+= Fast datasets\n(('note:高速なデータセット'))
+
+  * Predicate pushdown\n
+    (('note:条件のプッシュダウン'))
+    * Scan only needed data\n
+    (('note:必要なデータのみ取得'))
+  * Parallel scan\n
+    (('note:並列取得'))
+
+= Feature (4)\n(('note:機能（4）'))
+
+RPC
+
+= RPC: Arrow Flight
+
+  * Fast RPC framework for Arrow\n
+    (('note:Arrow用の高速なRPC'))
+  * Based on gRPC with low-level extensions\n
+    (('note:gRPCベースでいくつか低レベルの拡張をしている'))
+
+(('note:((<Apache 0.11.0 Release|URL:https://arrow.apache.org/blog/2018/10/09/0.11.0-release/>))'))
+
+= Wrap up\n(('note:まとめ'))
+
+  * Arrow is useful for SciPy community\n
+    (('note:SciPyコミュニティーにArrowは有用'))
+    * in not only Python but also other languages\n
+      (('note:Pythonだけでなく他の言語でも有用'))
+  * Join Apache Arrow development!\n
+    (('note:Apache Arrowの開発に参加しよう！'))
+    * Ask me how to start\n
+      (('note:なにから始めればよいかは私に相談してね'))
+
+= Next step\n(('note:次の一歩'))
+
+  * ((<Mailing list|URL:https://lists.apache.org/list.html?dev@arrow.apache.org>)): dev@arrow.apache.org
+  * Chat in Japanese:
+    * ((<URL:https://gitter.im/apache-arrow-ja/community>))
+  * Apache Arrow Tokyo Meetup 2019 (('note:this summer?'))
+    * See also: ((<Apache Arrow Tokyo Meetup 2018|URL:https://speee.connpass.com/event/103514>))

data/config.yaml

@@ -0,0 +1,23 @@
+---
+id: scipy-japan-2019
+base_name: apache-arrow
+tags:
+- rabbit
+- apachearrow
+- scipyjapan
+presentation_date: 2019-04-23
+version: 2019.4.23.0
+licenses:
+- CC-BY-SA-4.0
+slideshare_id: 
+speaker_deck_id: 
+ustream_id: 
+vimeo_id: 
+youtube_id: 
+author:
+  markup_language: :rd
+  name: Kouhei Sutou
+  email: kou@clear-code.com
+  rubygems_user: kou
+  slideshare_user: kou
+  speaker_deck_user: 

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data/theme.rb

@@ -0,0 +1 @@
+include_theme("clear-code")

metadata

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+--- !ruby/object:Gem::Specification
+name: rabbit-slide-kou-scipy-japan-2019
+version: !ruby/object:Gem::Version
+  version: 2019.4.23.0
+platform: ruby
+authors:
+- Kouhei Sutou
+autorequire: 
+bindir: bin
+cert_chain: []
+date: 2019-04-22 00:00:00.000000000 Z
+dependencies:
+- !ruby/object:Gem::Dependency
+  name: rabbit
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: 2.0.2
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: 2.0.2
+- !ruby/object:Gem::Dependency
+  name: rabbit-theme-clear-code
+  requirement: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+  type: :runtime
+  prerelease: false
+  version_requirements: !ruby/object:Gem::Requirement
+    requirements:
+    - - ">="
+      - !ruby/object:Gem::Version
+        version: '0'
+description: |-
+  Apache Arrow is the future for data processing systems. This talk
+  describes how to solve data sharing overhead in data processing system
+  such as Spark and PySpark. This talk also describes how to accelerate
+  computation against your large data by Apache Arrow.
+email:
+- kou@clear-code.com
+executables: []
+extensions: []
+extra_rdoc_files: []
+files:
+- ".rabbit"
+- README.rd
+- Rakefile
+- apache-arrow.rab
+- config.yaml
+- images/apache-arrow-and-me.svg
+- images/commits-0.11.0-0.12.0.png
+- images/commits-0.12.0-0.13.0.png
+- images/contributors.png
+- images/serialize-list.png
+- images/simd-null.svg
+- pdf/scipy-japan-2019-apache-arrow.pdf
+- plot-0.png
+- plot-1.png
+- plot-2.png
+- plot-3.png
+- theme.rb
+homepage: https://slide.rabbit-shocker.org/authors/kou/scipy-japan-2019/
+licenses:
+- CC-BY-SA-4.0
+metadata: {}
+post_install_message: 
+rdoc_options: []
+require_paths:
+- lib
+required_ruby_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+required_rubygems_version: !ruby/object:Gem::Requirement
+  requirements:
+  - - ">="
+    - !ruby/object:Gem::Version
+      version: '0'
+requirements: []
+rubyforge_project: 
+rubygems_version: 2.7.6.2
+signing_key: 
+specification_version: 4
+summary: Apache Arrow - A cross-language development platform for in-memory data
+test_files: []