quality-measure-engine 3.0.0.beta.1 → 3.0.0.beta.2

Sign up to get free protection for your applications and to get access to all the features.
checksums.yaml CHANGED
@@ -1,15 +1,7 @@
1
1
  ---
2
- !binary "U0hBMQ==":
3
- metadata.gz: !binary |-
4
- ODgyZTA5NDU0MGQ0NjZlOTc2YWYwZTYyYmE3OWZlZTUzNDNmYTYzOA==
5
- data.tar.gz: !binary |-
6
- ZjIwZDA5NTdkZWNjODBkYTMxNWY3YjA3ZWE3OWI3NTkwZTMwOTQxMQ==
7
- !binary "U0hBNTEy":
8
- metadata.gz: !binary |-
9
- NTkxNTdlMWJiMzJjNDY0MjQxYjc0MjFjMGQyYTc4ZGZlZGU5ODhmNzIyMWI5
10
- YWUxZDM0ODc5YzE0ZmI3OWRlMTg3ZWM5MWE5NDkyZGNkOTQ3YzI5ZWViNWUx
11
- NzgzNWI0ZGQwZDE3MTk1MTU2N2ZjZjRhMGViMjY4MzIwNTFlZDM=
12
- data.tar.gz: !binary |-
13
- ZDMwZTJkYTlkMWRmZWM1ZTc2YzZlNjM1ZTdlYTU0YzNlYTlmZThiNzhlN2Zh
14
- NTA3NmVjNTk0ZjkyNjZkODZlYTZkYTVhZjYxZGQxMDUzNjMyMTZiZDdiNDRi
15
- NWFhMjg1NmY1NzEzMzQ3NDAyOTA2MmVkMDhmYjU5ZjllMzQwZTI=
2
+ SHA1:
3
+ metadata.gz: beaf9a738f7e5f96a38c9a957f67f8f217488d3b
4
+ data.tar.gz: 521284050bb03474124e0f9b7dce44d80ef624cd
5
+ SHA512:
6
+ metadata.gz: f7e4d5734807a301d90ede1db6bb6b5792b54bbb552bf4db1787ee4abb6cd838337dd111f3c10265fa2b631fc3e278c479ecfcd05b6bcc301bab75e973cfbc1f
7
+ data.tar.gz: 3d5b2930490049194049608781fc2c865034ebfd62ba9c7ca3568590a05a30d1db1cbf79a62a15ef72decb9e539bfe4de703fa69d460411a22739e8b388fe793
data/.travis.yml CHANGED
@@ -1,6 +1,8 @@
1
1
  language: ruby
2
2
  rvm:
3
3
  - 1.9.3
4
+ - 2.0.0
5
+ - 2.1.1
4
6
  script: bundle exec rake test
5
7
  services:
6
8
  - mongodb
@@ -13,4 +15,4 @@ notifications:
13
15
  branches:
14
16
  only:
15
17
  - master
16
- - develop
18
+ - mongoid_refactor
data/Gemfile.lock CHANGED
@@ -1,7 +1,7 @@
1
1
  PATH
2
2
  remote: .
3
3
  specs:
4
- quality-measure-engine (3.0.0.beta.1)
4
+ quality-measure-engine (3.0.0.beta.2)
5
5
  delayed_job_mongoid (~> 2.0.0)
6
6
  mongoid (~> 3.1.4)
7
7
  moped (~> 1.5.1)
@@ -62,14 +62,14 @@ GEM
62
62
  treetop (~> 1.4.8)
63
63
  method_source (0.8.2)
64
64
  mime-types (1.24)
65
- mini_portile (0.5.1)
65
+ mini_portile (0.5.2)
66
66
  minitest (4.7.5)
67
- mongoid (3.1.5)
67
+ mongoid (3.1.6)
68
68
  activemodel (~> 3.2)
69
69
  moped (~> 1.4)
70
70
  origin (~> 1.0)
71
71
  tzinfo (~> 0.3.29)
72
- moped (1.5.1)
72
+ moped (1.5.2)
73
73
  multi_json (1.8.2)
74
74
  nokogiri (1.6.0)
75
75
  mini_portile (~> 0.5.0)
@@ -187,10 +187,10 @@ module QME
187
187
  # that the record belongs to, such as numerator, etc.
188
188
  def map_records_into_measure_groups
189
189
  measure = Builder.new(get_db(), @measure_def, @parameter_values)
190
- get_db().command(:mapReduce => 'records',
190
+ get_db().command(:mapreduce => 'records',
191
191
  :map => measure.map_function,
192
192
  :reduce => "function(key, values){return values;}",
193
- :out => {:reduce => 'patient_cache'},
193
+ :out => {:reduce => 'patient_cache', :sharded => true},
194
194
  :finalize => measure.finalize_function,
195
195
  :query => {:test_id => @parameter_values['test_id']})
196
196
  QME::ManualExclusion.apply_manual_exclusions(@measure_id,@sub_id)
@@ -201,10 +201,10 @@ module QME
201
201
  # will state the measure groups that the record belongs to, such as numerator, etc.
202
202
  def map_record_into_measure_groups(patient_id)
203
203
  measure = Builder.new(get_db(), @measure_def, @parameter_values)
204
- get_db().command(:mapReduce => 'records',
204
+ get_db().command(:mapreduce => 'records',
205
205
  :map => measure.map_function,
206
206
  :reduce => "function(key, values){return values;}",
207
- :out => {:reduce => 'patient_cache'},
207
+ :out => {:reduce => 'patient_cache', :sharded => true},
208
208
  :finalize => measure.finalize_function,
209
209
  :query => {:medical_record_number => patient_id, :test_id => @parameter_values["test_id"]})
210
210
  QME::ManualExclusion.apply_manual_exclusions(@measure_id,@sub_id)
@@ -216,7 +216,7 @@ module QME
216
216
  # result is returned directly.
217
217
  def get_patient_result(patient_id)
218
218
  measure = Builder.new(get_db(), @measure_def, @parameter_values)
219
- result = get_db().command(:mapReduce => 'records',
219
+ result = get_db().command(:mapreduce => 'records',
220
220
  :map => measure.map_function,
221
221
  :reduce => "function(key, values){return values;}",
222
222
  :out => {:inline => true},
@@ -171,9 +171,8 @@ module QME
171
171
  match['value.gender'] = {'$in' => filters['genders']}
172
172
  end
173
173
  if (filters['providers'] && filters['providers'].size > 0)
174
-
175
- providers = filters['providers'].map { |pv| {'providers' => Moped::BSON::ObjectId(pv) } }
176
- match['value.provider_performances.provider_id']= {'$in' => providers}
174
+ providers = filters['providers'].map { |pv| Moped::BSON::ObjectId(pv) }
175
+ match['value.provider_performances.provider_id'] = {'$in' => providers}
177
176
  end
178
177
  if (filters['languages'] && filters['languages'].size > 0)
179
178
  match["value.languages"] = {'$in' => filters['languages']}
data/lib/qme/version.rb CHANGED
@@ -1,3 +1,3 @@
1
1
  module QME
2
- VERSION = "3.0.0.beta.1"
2
+ VERSION = "3.0.0.beta.2"
3
3
  end
metadata CHANGED
@@ -1,7 +1,7 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: quality-measure-engine
3
3
  version: !ruby/object:Gem::Version
4
- version: 3.0.0.beta.1
4
+ version: 3.0.0.beta.2
5
5
  platform: ruby
6
6
  authors:
7
7
  - Marc Hadley
@@ -12,132 +12,132 @@ authors:
12
12
  autorequire:
13
13
  bindir: bin
14
14
  cert_chain: []
15
- date: 2013-12-11 00:00:00.000000000 Z
15
+ date: 2014-02-28 00:00:00.000000000 Z
16
16
  dependencies:
17
17
  - !ruby/object:Gem::Dependency
18
18
  name: moped
19
19
  requirement: !ruby/object:Gem::Requirement
20
20
  requirements:
21
- - - ~>
21
+ - - "~>"
22
22
  - !ruby/object:Gem::Version
23
23
  version: 1.5.1
24
24
  type: :runtime
25
25
  prerelease: false
26
26
  version_requirements: !ruby/object:Gem::Requirement
27
27
  requirements:
28
- - - ~>
28
+ - - "~>"
29
29
  - !ruby/object:Gem::Version
30
30
  version: 1.5.1
31
31
  - !ruby/object:Gem::Dependency
32
32
  name: mongoid
33
33
  requirement: !ruby/object:Gem::Requirement
34
34
  requirements:
35
- - - ~>
35
+ - - "~>"
36
36
  - !ruby/object:Gem::Version
37
37
  version: 3.1.4
38
38
  type: :runtime
39
39
  prerelease: false
40
40
  version_requirements: !ruby/object:Gem::Requirement
41
41
  requirements:
42
- - - ~>
42
+ - - "~>"
43
43
  - !ruby/object:Gem::Version
44
44
  version: 3.1.4
45
45
  - !ruby/object:Gem::Dependency
46
46
  name: rubyzip
47
47
  requirement: !ruby/object:Gem::Requirement
48
48
  requirements:
49
- - - ~>
49
+ - - "~>"
50
50
  - !ruby/object:Gem::Version
51
51
  version: 0.9.9
52
52
  type: :runtime
53
53
  prerelease: false
54
54
  version_requirements: !ruby/object:Gem::Requirement
55
55
  requirements:
56
- - - ~>
56
+ - - "~>"
57
57
  - !ruby/object:Gem::Version
58
58
  version: 0.9.9
59
59
  - !ruby/object:Gem::Dependency
60
60
  name: delayed_job_mongoid
61
61
  requirement: !ruby/object:Gem::Requirement
62
62
  requirements:
63
- - - ~>
63
+ - - "~>"
64
64
  - !ruby/object:Gem::Version
65
65
  version: 2.0.0
66
66
  type: :runtime
67
67
  prerelease: false
68
68
  version_requirements: !ruby/object:Gem::Requirement
69
69
  requirements:
70
- - - ~>
70
+ - - "~>"
71
71
  - !ruby/object:Gem::Version
72
72
  version: 2.0.0
73
73
  - !ruby/object:Gem::Dependency
74
74
  name: nokogiri
75
75
  requirement: !ruby/object:Gem::Requirement
76
76
  requirements:
77
- - - ~>
77
+ - - "~>"
78
78
  - !ruby/object:Gem::Version
79
79
  version: 1.6.0
80
80
  type: :runtime
81
81
  prerelease: false
82
82
  version_requirements: !ruby/object:Gem::Requirement
83
83
  requirements:
84
- - - ~>
84
+ - - "~>"
85
85
  - !ruby/object:Gem::Version
86
86
  version: 1.6.0
87
87
  - !ruby/object:Gem::Dependency
88
88
  name: rubyXL
89
89
  requirement: !ruby/object:Gem::Requirement
90
90
  requirements:
91
- - - ~>
91
+ - - "~>"
92
92
  - !ruby/object:Gem::Version
93
93
  version: 1.2.10
94
94
  type: :runtime
95
95
  prerelease: false
96
96
  version_requirements: !ruby/object:Gem::Requirement
97
97
  requirements:
98
- - - ~>
98
+ - - "~>"
99
99
  - !ruby/object:Gem::Version
100
100
  version: 1.2.10
101
101
  - !ruby/object:Gem::Dependency
102
102
  name: minitest
103
103
  requirement: !ruby/object:Gem::Requirement
104
104
  requirements:
105
- - - ~>
105
+ - - "~>"
106
106
  - !ruby/object:Gem::Version
107
107
  version: 4.1.0
108
108
  type: :development
109
109
  prerelease: false
110
110
  version_requirements: !ruby/object:Gem::Requirement
111
111
  requirements:
112
- - - ~>
112
+ - - "~>"
113
113
  - !ruby/object:Gem::Version
114
114
  version: 4.1.0
115
115
  - !ruby/object:Gem::Dependency
116
116
  name: simplecov
117
117
  requirement: !ruby/object:Gem::Requirement
118
118
  requirements:
119
- - - ~>
119
+ - - "~>"
120
120
  - !ruby/object:Gem::Version
121
121
  version: 0.7.1
122
122
  type: :development
123
123
  prerelease: false
124
124
  version_requirements: !ruby/object:Gem::Requirement
125
125
  requirements:
126
- - - ~>
126
+ - - "~>"
127
127
  - !ruby/object:Gem::Version
128
128
  version: 0.7.1
129
129
  - !ruby/object:Gem::Dependency
130
130
  name: rails
131
131
  requirement: !ruby/object:Gem::Requirement
132
132
  requirements:
133
- - - ~>
133
+ - - "~>"
134
134
  - !ruby/object:Gem::Version
135
135
  version: 3.2.8
136
136
  type: :development
137
137
  prerelease: false
138
138
  version_requirements: !ruby/object:Gem::Requirement
139
139
  requirements:
140
- - - ~>
140
+ - - "~>"
141
141
  - !ruby/object:Gem::Version
142
142
  version: 3.2.8
143
143
  description: A library for running clinical quality measures
@@ -147,8 +147,8 @@ executables: []
147
147
  extensions: []
148
148
  extra_rdoc_files: []
149
149
  files:
150
- - .gitignore
151
- - .travis.yml
150
+ - ".gitignore"
151
+ - ".travis.yml"
152
152
  - Gemfile
153
153
  - Gemfile.lock
154
154
  - LICENSE.txt
@@ -202,17 +202,17 @@ require_paths:
202
202
  - lib
203
203
  required_ruby_version: !ruby/object:Gem::Requirement
204
204
  requirements:
205
- - - ! '>='
205
+ - - ">="
206
206
  - !ruby/object:Gem::Version
207
207
  version: '0'
208
208
  required_rubygems_version: !ruby/object:Gem::Requirement
209
209
  requirements:
210
- - - ! '>'
210
+ - - ">"
211
211
  - !ruby/object:Gem::Version
212
212
  version: 1.3.1
213
213
  requirements: []
214
214
  rubyforge_project:
215
- rubygems_version: 2.0.7
215
+ rubygems_version: 2.2.2
216
216
  signing_key:
217
217
  specification_version: 4
218
218
  summary: This library can run JavaScript based clinical quality measures on a repository