pca 0.3.0 → 0.4.0
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- checksums.yaml +4 -4
- data/lib/pca.rb +7 -3
- metadata +2 -2
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA1:
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|
3
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-
metadata.gz:
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|
4
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-
data.tar.gz:
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|
3
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+
metadata.gz: af5f92faa60fc75cde12821070ae5e3958f0b59f
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|
4
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+
data.tar.gz: 57df9c3ed011995f288053cfa710171409481900
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5
5
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SHA512:
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|
6
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-
metadata.gz:
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|
7
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-
data.tar.gz:
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|
6
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+
metadata.gz: 60e5c1bdfd67811bbff65c188667cee17c5c43541ce4607f67ad1c077c801b72af9eb46e54621cd9c2018c4caeb77e25e8c94431b906ae019d1d6047ca2f5532
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|
7
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+
data.tar.gz: 8edf2ff43d3a3704005163ca041f05c8e5eec6c5e3bd15a27512ddad12551c1dcc2aa157f9923523037c2f1a9286d3d2c844479b1e363baed52a0d6c082ad74b
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data/lib/pca.rb
CHANGED
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@@ -54,10 +54,14 @@ class PCA
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|
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54
54
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def _fit x
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|
55
55
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covariance_matrix = (x.transpose * x) / x.size1
|
|
56
56
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u, v, s = covariance_matrix.SV_decomp
|
|
57
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-
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57
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+
|
|
58
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+
ev = s**2 / x.size1
|
|
59
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+
evr = ev / ev.sum
|
|
60
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+
|
|
61
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+
@explained_variance = slice_n ev
|
|
62
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+
@explained_variance_ratio = slice_n evr
|
|
58
63
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@singular_values = slice_n s
|
|
59
|
-
@
|
|
60
|
-
@explained_variance_ratio = @explained_variance / @explained_variance.sum
|
|
64
|
+
@components = slice_n(u).transpose
|
|
61
65
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end
|
|
62
66
|
|
|
63
67
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def _transform x
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metadata
CHANGED
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@@ -1,14 +1,14 @@
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1
1
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--- !ruby/object:Gem::Specification
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|
2
2
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name: pca
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|
3
3
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version: !ruby/object:Gem::Version
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|
4
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-
version: 0.
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|
4
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+
version: 0.4.0
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|
5
5
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platform: ruby
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|
6
6
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authors:
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|
7
7
|
- Geoff Buesing
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|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
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|
11
|
-
date: 2015-04-
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|
11
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+
date: 2015-04-18 00:00:00.000000000 Z
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|
12
12
|
dependencies:
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|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
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name: rb-gsl
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