osc-machete 2.0.0.pre1 → 2.0.0.pre2
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/lib/osc/machete/job.rb +1 -1
- data/lib/osc/machete/torque_helper.rb +14 -5
- data/lib/osc/machete/version.rb +1 -1
- data/test/test_torque_helper_live.rb +1 -1
- metadata +2 -2
checksums.yaml
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
---
|
|
2
2
|
SHA1:
|
|
3
|
-
metadata.gz:
|
|
4
|
-
data.tar.gz:
|
|
3
|
+
metadata.gz: 00b1524199570027e478eda1a0cc138cfe19c176
|
|
4
|
+
data.tar.gz: 33984c5911b6d573ccb152def90b129bc4d1573c
|
|
5
5
|
SHA512:
|
|
6
|
-
metadata.gz:
|
|
7
|
-
data.tar.gz:
|
|
6
|
+
metadata.gz: bb042baf00cc3d323db113d28d8cc7d0530ecebcbce25b4be7157161199698ac28ee079237050e72fae3285ac2000a3e14882096a504b68f8602cd9a63878d05
|
|
7
|
+
data.tar.gz: b2147e8540d40e2befc8b9dd5201ae7178d70fcca2bad6cb234c97a86d1155c33199913af7a4417905e7c2111ab46686900da61b75bb04313b7a985aec503f01
|
data/lib/osc/machete/job.rb
CHANGED
|
@@ -56,7 +56,7 @@ require 'pathname'
|
|
|
56
56
|
# @return [String, nil] path of the job script, or nil if not set
|
|
57
57
|
#
|
|
58
58
|
class OSC::Machete::Job
|
|
59
|
-
attr_reader :pbsid, :script_path, :account_string
|
|
59
|
+
attr_reader :pbsid, :script_path, :account_string, :host
|
|
60
60
|
|
|
61
61
|
class << self
|
|
62
62
|
# set this to change the billable account that is used by default
|
|
@@ -8,11 +8,13 @@ require 'pbs'
|
|
|
8
8
|
# == FIXME: This contains no state whatsoever. It should probably be changed into a module.
|
|
9
9
|
class OSC::Machete::TorqueHelper
|
|
10
10
|
# FIXME: Use ood_cluster gem
|
|
11
|
-
|
|
11
|
+
LIB = ENV['TORQUE_LIB'] || '/opt/torque/lib64'
|
|
12
|
+
BIN = ENV['TORQUE_BIN'] || '/opt/torque/bin'
|
|
12
13
|
HOSTS = {
|
|
13
14
|
'oakley' => 'oak-batch.osc.edu',
|
|
14
15
|
'ruby' => 'ruby-batch.osc.edu',
|
|
15
|
-
'quick' => 'quick-batch.osc.edu'
|
|
16
|
+
'quick' => 'quick-batch.osc.edu',
|
|
17
|
+
'owens' => 'owens-batch.ten.osc.edu'
|
|
16
18
|
}
|
|
17
19
|
|
|
18
20
|
# Alias to initialize a new object.
|
|
@@ -64,7 +66,8 @@ class OSC::Machete::TorqueHelper
|
|
|
64
66
|
# isn't properly handled and the job gets limited to 4GB
|
|
65
67
|
pbs = PBS::Batch.new(
|
|
66
68
|
host: HOSTS.fetch( host || host_from_script_pbs_header(script) ),
|
|
67
|
-
|
|
69
|
+
lib: LIB,
|
|
70
|
+
bin: BIN
|
|
68
71
|
)
|
|
69
72
|
|
|
70
73
|
headers = { depend: qsub_dependencies_header(depends_on) }
|
|
@@ -116,7 +119,8 @@ class OSC::Machete::TorqueHelper
|
|
|
116
119
|
id = pbsid.to_s
|
|
117
120
|
pbs = PBS::Batch.new(
|
|
118
121
|
host: HOSTS.fetch( host || host_from_pbsid(id) ),
|
|
119
|
-
|
|
122
|
+
lib: LIB,
|
|
123
|
+
bin: BIN
|
|
120
124
|
)
|
|
121
125
|
|
|
122
126
|
status = pbs.get_job(id, filters: [:job_state])
|
|
@@ -134,7 +138,8 @@ class OSC::Machete::TorqueHelper
|
|
|
134
138
|
id = pbsid.to_s
|
|
135
139
|
pbs = PBS::Batch.new(
|
|
136
140
|
host: HOSTS.fetch( host || host_from_pbsid(id) ),
|
|
137
|
-
|
|
141
|
+
lib: LIB,
|
|
142
|
+
bin: BIN
|
|
138
143
|
)
|
|
139
144
|
|
|
140
145
|
pbs.delete_job(id)
|
|
@@ -152,6 +157,8 @@ class OSC::Machete::TorqueHelper
|
|
|
152
157
|
"ruby"
|
|
153
158
|
elsif (File.open(script) { |f| f.read =~ /#PBS -q @quick-batch/ })
|
|
154
159
|
"quick"
|
|
160
|
+
elsif (File.open(script) { |f| f.read =~ /#PBS -q @owens-batch/ })
|
|
161
|
+
"owens"
|
|
155
162
|
else
|
|
156
163
|
"oakley" # DEFAULT
|
|
157
164
|
end
|
|
@@ -165,6 +172,8 @@ class OSC::Machete::TorqueHelper
|
|
|
165
172
|
"ruby"
|
|
166
173
|
elsif (pbsid =~ /quick/ )
|
|
167
174
|
"quick"
|
|
175
|
+
elsif (pbsid =~ /owens/ )
|
|
176
|
+
"owens"
|
|
168
177
|
else
|
|
169
178
|
"oakley" # DEFAULT
|
|
170
179
|
end
|
data/lib/osc/machete/version.rb
CHANGED
|
@@ -30,7 +30,7 @@ class TestTorqueHelperLive < Minitest::Test
|
|
|
30
30
|
# This raises an issue mentioning that it is not being submitted on the
|
|
31
31
|
# correct host, comment out the raise to skip the live tests.
|
|
32
32
|
# Maybe this would be better accomplished with a separate rake task.
|
|
33
|
-
@submit_host = "
|
|
33
|
+
@submit_host = "webdev02.hpc.osc.edu"
|
|
34
34
|
|
|
35
35
|
@job_state_queued = OSC::Machete::Status.queued
|
|
36
36
|
@job_state_completed = OSC::Machete::Status.passed
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: osc-machete
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 2.0.0.
|
|
4
|
+
version: 2.0.0.pre2
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Eric Franz
|
|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date: 2016-08-
|
|
11
|
+
date: 2016-08-30 00:00:00.000000000 Z
|
|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: bundler
|