opencpu 0.7.8 → 0.8.0

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@@ -1,3 +1,9 @@
1
+ # 0.8.0
2
+
3
+ * BREAKING CHANGE: verify ssl of opencpu server by default again.
4
+ * Added configuration option verify_ssl so you can disable it.
5
+ * Added format: :urlencoded for sending R-code and file parameters.
6
+
1
7
  # 0.7.8
2
8
 
3
9
  * Fixed gem by forcing json again (will add format option in 0.8)
data/README.md CHANGED
@@ -27,6 +27,7 @@ Or install it yourself as:
27
27
  OpenCPU.configure do |config|
28
28
  config.endpoint_url = 'https://public.opencpu.org/ocpu'
29
29
  config.timeout = 30 # Timeout in seconds
30
+ config.verify_ssl = true # set to false for opencpu server with self-signed certificates.
30
31
  end
31
32
  ```
32
33
 
@@ -36,6 +37,16 @@ end
36
37
  client = OpenCPU.client
37
38
  ```
38
39
 
40
+ ### Formats
41
+
42
+ By default we send data using the json format. This format is efficient and safe, but only supports strings and numeric parameters (see [opencpu page](https://www.opencpu.org/api.html#api-arguments))
43
+
44
+ If you want to send R code argument, you'll need to specify format: :urlencoded in your request. Note that you need to enclose your string parameters in quotes in that case, since they will be seen as variables otherwise:
45
+
46
+ ```Ruby
47
+ client.execute :digest, :hmac, data: { key: "'foo'", object: "'bar'"" }, format: :urlencoded
48
+ ```
49
+
39
50
  ### One-step call
40
51
 
41
52
  One-step call always returns a JSON result from OpenCPU. This is a preferred
@@ -144,10 +155,10 @@ calculations.info
144
155
 
145
156
  **Multipart requests with files**
146
157
 
147
- If you want to send one or more files along, you can pass in a File object as data:
158
+ If you want to send one or more files along, you can pass in a File object as data, but only when using the urlencoded format.
148
159
 
149
160
  ```Ruby
150
- client.execute :foo, :bar, user: :johndoe, data: {file: File.new('/tmp/test.foo')}
161
+ client.execute :foo, :bar, user: :johndoe, data: {file: File.new('/tmp/test.foo')}, format: :urlencoded
151
162
  ```
152
163
 
153
164
  ## Testing
@@ -8,9 +8,10 @@ module OpenCPU
8
8
  end
9
9
 
10
10
  def execute(package, function, options = {})
11
- user = options.fetch :user, :system
12
- data = options.fetch :data, {}
13
- process_query package_url(package, function, user, :json), data do |response|
11
+ user = options.fetch :user, :system
12
+ data = options.fetch :data, {}
13
+ format = options.fetch :format, :json
14
+ process_query package_url(package, function, user, :json), data, format do |response|
14
15
  JSON.parse(response.body)
15
16
  end
16
17
  end
@@ -18,7 +19,8 @@ module OpenCPU
18
19
  def prepare(package, function, options = {})
19
20
  user = options.fetch :user, :system
20
21
  data = options.fetch :data, {}
21
- process_query package_url(package, function, user), data do |response|
22
+ format = options.fetch :format, :json
23
+ process_query package_url(package, function, user), data, format do |response|
22
24
  location = response.headers['location']
23
25
  resources = response.body.split(/\n/)
24
26
  OpenCPU::DelayedCalculation.new(location, resources)
@@ -27,20 +29,10 @@ module OpenCPU
27
29
 
28
30
  private
29
31
 
30
- def process_query(url, data, &block)
32
+ def process_query(url, data, format, &block)
31
33
  return fake_response_for(url) if OpenCPU.test_mode?
32
- options = {
33
- body: data.to_json,
34
- headers: {"Content-Type" => 'application/json'},
35
- verify: false
36
- }
37
34
 
38
- if OpenCPU.configuration.username && OpenCPU.configuration.password
39
- options[:basic_auth] = {
40
- username: OpenCPU.configuration.username, password: OpenCPU.configuration.password
41
- }
42
- end
43
- response = self.class.post(url, options)
35
+ response = self.class.post(url, request_options(data, format))
44
36
 
45
37
  case response.code
46
38
  when 200..201
@@ -52,6 +44,27 @@ module OpenCPU
52
44
  end
53
45
  end
54
46
 
47
+ def request_options(data, format)
48
+ options = {
49
+ verify: OpenCPU.configuration.verify_ssl
50
+ }
51
+
52
+ case format
53
+ when :json
54
+ options[:body] = data.to_json
55
+ options[:headers] = {"Content-Type" => 'application/json'}
56
+ when :urlencoded
57
+ options[:query] = data
58
+ end
59
+
60
+ if OpenCPU.configuration.username && OpenCPU.configuration.password
61
+ options[:basic_auth] = {
62
+ username: OpenCPU.configuration.username, password: OpenCPU.configuration.password
63
+ }
64
+ end
65
+ options
66
+ end
67
+
55
68
  def package_url(package, function, user = :system, format = nil)
56
69
  return ['', 'library', package, 'R', function, format.to_s].join('/') if user == :system
57
70
  return ['', 'user', user, 'library', package, 'R', function, format.to_s].join('/')
@@ -6,9 +6,11 @@ module OpenCPU
6
6
  attr_accessor :password
7
7
  attr_accessor :mode
8
8
  attr_accessor :fake_responses
9
+ attr_accessor :verify_ssl
9
10
 
10
11
  def initialize
11
12
  @fake_responses = {}
13
+ @verify_ssl = true
12
14
  end
13
15
 
14
16
  def add_fake_response(key, response)
@@ -25,6 +27,7 @@ module OpenCPU
25
27
  @username = nil
26
28
  @password = nil
27
29
  @mode = nil
30
+ @verify_ssl = true
28
31
  @fake_responses = {}
29
32
  end
30
33
  end
@@ -1,6 +1,6 @@
1
1
  module OpenCPU
2
2
  MAJOR = 0
3
- MINOR = 7
4
- TINY = 8
3
+ MINOR = 8
4
+ TINY = 0
5
5
  VERSION = [MAJOR, MINOR, TINY].join('.')
6
6
  end
@@ -0,0 +1,3 @@
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+ "head1", "head2", "head3"
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+ 1, 2, 3
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+ 4, 5, 6
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