openbabel-heroku 2.3.2.0 → 2.3.2.3

Sign up to get free protection for your applications and to get access to all the features.
@@ -10,84 +10,16 @@ ob_ver = "openbabel-"+ob_num_ver
10
10
  RUBY=File.join(RbConfig::CONFIG['bindir'], RbConfig::CONFIG['ruby_install_name'])
11
11
 
12
12
  main_dir = File.expand_path(File.join(File.dirname(__FILE__),"..",".."))
13
- src_dir = File.join main_dir, ob_ver
14
- build_dir = File.join main_dir, "build"
15
- install_dir = main_dir
13
+ ext_dir = File.join main_dir, "ext/openbabel"
14
+
15
+ install_dir = "~/vendor/openbabel"
16
16
  install_lib_dir = File.join install_dir, "lib"
17
- lib_dir = File.join main_dir, "lib", "openbabel"
18
- ruby_src_dir = File.join src_dir, "scripts", "ruby"
19
- cmake_dir = File.join main_dir, "cmake-2.8.11.2"
20
17
 
21
- begin
22
- nr_processors = `grep processor /proc/cpuinfo | wc -l` # speed up compilation, Linux only
23
- rescue
24
- nr_processors = 1
25
- end
26
18
 
27
19
  begin
28
- Dir.chdir main_dir do
29
- FileUtils.rm_rf src_dir
30
- system "curl -L 'http://www.cmake.org/files/v2.8/cmake-2.8.11.2.tar.gz' | tar xz"
31
-
32
- Dir.chdir cmake_dir do
33
- system "./bootstrap"
34
- system "make"
35
- end
36
-
37
- end
38
-
39
- Dir.chdir main_dir do
40
- puts "Downloading OpenBabel sources"
41
- system "curl -L -d use_mirror=netcologne 'http://downloads.sourceforge.net/project/openbabel/openbabel/#{ob_num_ver}/openbabel-#{ob_num_ver}.tar.gz' | tar xz"
42
- system "sed -i -e 's/-Wl,-flat_namespace//;s/-flat_namespace//' #{File.join ruby_src_dir, "extconf.rb"}" # remove unrecognized compiler option
43
- system "sed -i -e 's/Init_OpenBabel/Init_openbabel/g' #{File.join ruby_src_dir,"*cpp"}" # fix swig bindings
44
- end
45
- FileUtils.mkdir_p build_dir
46
- FileUtils.mkdir_p install_dir
47
- Dir.chdir build_dir do
48
- puts "Configuring OpenBabel"
49
-
50
-
51
- cmake = "#{cmake_dir}/bin/cmake #{src_dir} -DCMAKE_INSTALL_PREFIX=#{install_dir} -DBUILD_GUI=OFF -DENABLE_TESTS=OFF -DRUBY_BINDINGS=ON"
52
- # set rpath for local installations
53
- # http://www.cmake.org/Wiki/CMake_RPATH_handling
54
- # http://vtk.1045678.n5.nabble.com/How-to-force-cmake-not-to-remove-install-rpath-td5721193.html
55
- cmake += " -DCMAKE_INSTALL_RPATH:STRING=\"#{install_lib_dir}\"" unless have_library('openbabel')
56
- system cmake
57
- end
58
- unless have_library('openbabel')
59
- # local installation in gem directory
60
- Dir.chdir build_dir do
61
- puts "OpenBabel not installed. Compiling sources."
62
- system "make -j#{nr_processors}"
63
- system "make install"
64
- ENV["PKG_CONFIG_PATH"] = File.dirname(File.expand_path(Dir["#{install_dir}/**/openbabel*pc"].first))
65
- end
66
- end
67
- # compile ruby bindings
68
- puts "Compiling and installing OpenBabel Ruby bindings."
69
- Dir.chdir ruby_src_dir do
70
- # fix rpath
71
- system "sed -i 's|with_ldflags.*$|with_ldflags(\"#\$LDFLAGS -dynamic -Wl,-rpath,#{install_lib_dir}\") do|' #{File.join(ruby_src_dir,'extconf.rb')}" unless have_library('openbabel')
72
- # get include and lib from pkg-config
73
- ob_include=`pkg-config openbabel-2.0 --cflags-only-I`.sub(/\s+/,'').sub(/-I/,'')
74
- ob_lib=`pkg-config openbabel-2.0 --libs-only-L`.sub(/\s+/,'').sub(/-L/,'')
75
- system "#{RUBY} extconf.rb --with-openbabel-include=#{ob_include} --with-openbabel-lib=#{ob_lib}"
76
- system "make -j#{nr_processors}"
77
- end
78
- FileUtils.cp(ruby_src_dir+"/openbabel.#{RbConfig::CONFIG["DLEXT"]}", "./")
79
- File.open('Makefile', 'w') do |makefile|
80
- makefile.write <<"EOF"
81
- .PHONY: openbabel.#{RbConfig::CONFIG["DLEXT"]}
82
- openbabel.#{RbConfig::CONFIG["DLEXT"]}:
83
- chmod 755 openbabel.#{RbConfig::CONFIG["DLEXT"]}
20
+
21
+ system "export LD_LIBRARY_PATH=~/vendor/openbabel/lib:$LD_LIBRARY_PATH"
22
+
23
+ create_makefile "openbabel"
84
24
 
85
- .PHONY: install
86
- install:
87
- mkdir -p #{lib_dir}
88
- mv openbabel.#{RbConfig::CONFIG["DLEXT"]} #{lib_dir}
89
- EOF
90
- end
91
- ensure
92
- FileUtils.remove_entry_secure src_dir, build_dir
93
25
  end
@@ -1,4 +1,7 @@
1
- require 'openbabel/openbabel'
1
+ # system "export LD_LIBRARY_PATH=~/vendor/openbabel/lib:$LD_LIBRARY_PATH"
2
+
3
+ require '/app/vendor/openbabel/lib/openbabel'
2
4
  require 'openbabel/version'
3
5
  # http://sourceforge.net/mailarchive/message.php?msg_id=31065700
4
6
  OpenBabel::OBConversion.new # required to load plugins
7
+
@@ -1,4 +1,4 @@
1
1
  module OpenBabel
2
2
  VERSION = '2.3.2'
3
- GEMVERSION = VERSION + '.0'
3
+ GEMVERSION = VERSION + '.3'
4
4
  end
metadata CHANGED
@@ -1,18 +1,19 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: openbabel-heroku
3
3
  version: !ruby/object:Gem::Version
4
- version: 2.3.2.0
4
+ version: 2.3.2.3
5
5
  prerelease:
6
6
  platform: ruby
7
7
  authors:
8
- - Dominic Lütjohann
8
+ - Dominic Luetjohann
9
9
  autorequire:
10
10
  bindir: bin
11
11
  cert_chain: []
12
- date: 2012-04-03 00:00:00.000000000 Z
12
+ date: 2013-10-06 00:00:00.000000000 Z
13
13
  dependencies: []
14
- description: OpenBabel as a GEM
15
- email:
14
+ description: OpenBabel as a GEM for heroku
15
+ email:
16
+ - dominic@luetjohann.com
16
17
  executables: []
17
18
  extensions:
18
19
  - ext/openbabel/extconf.rb
@@ -23,7 +24,7 @@ files:
23
24
  - lib/openbabel/version.rb
24
25
  - test/test_openbabel.rb
25
26
  - ext/openbabel/extconf.rb
26
- homepage: http://github.com/cominch/openbabel-heroku-gem
27
+ homepage: http://github.com/Cominch/openbabel-heroku-gem
27
28
  licenses:
28
29
  - GPL-3
29
30
  post_install_message: