oddb2xml 1.6.8 → 1.6.9
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- data/History.txt +5 -0
- data/Manifest.txt +3 -3
- data/Rakefile +1 -1
- data/lib/oddb2xml/downloader.rb +1 -0
- data/lib/oddb2xml/extractor.rb +9 -13
- data/lib/oddb2xml/version.rb +1 -1
- data/spec/data/swissmedic_orphans.xls +0 -0
- data/spec/data/{swissmedic_orphan.xls → swissmedic_packages.xls} +0 -0
- data/spec/extractor_spec.rb +7 -6
- data/spec/spec_helper.rb +14 -11
- metadata +8 -8
- /data/spec/data/{swissmedic_fridge.xlsx → swissmedic_fridges.xlsx} +0 -0
- /data/spec/data/{swissmedic_package.xlsx → swissmedic_packages.xlsx} +0 -0
data/History.txt
CHANGED
data/Manifest.txt
CHANGED
@@ -45,17 +45,17 @@ spec/data/oddb_substance.xml
|
|
45
45
|
spec/data/swissindex.xml
|
46
46
|
spec/data/swissindex_nonpharma.xml
|
47
47
|
spec/data/swissindex_pharma.xml
|
48
|
-
spec/data/swissmedic_fridge.xlsx
|
49
48
|
spec/data/swissmedic_fridges.html
|
50
49
|
spec/data/swissmedic_fridges.xls
|
50
|
+
spec/data/swissmedic_fridges.xlsx
|
51
51
|
spec/data/swissmedic_info.html
|
52
52
|
spec/data/swissmedic_info.zip
|
53
53
|
spec/data/swissmedic_info_2.html
|
54
|
-
spec/data/swissmedic_orphan.xls
|
55
54
|
spec/data/swissmedic_orphans.html
|
56
55
|
spec/data/swissmedic_orphans.xls
|
57
|
-
spec/data/swissmedic_package.xlsx
|
58
56
|
spec/data/swissmedic_packages.html
|
57
|
+
spec/data/swissmedic_packages.xls
|
58
|
+
spec/data/swissmedic_packages.xlsx
|
59
59
|
spec/data/wsdl.xml
|
60
60
|
spec/data/wsdl_nonpharma.xml
|
61
61
|
spec/data/wsdl_pharma.xml
|
data/Rakefile
CHANGED
@@ -19,7 +19,7 @@ Hoe.spec 'oddb2xml' do
|
|
19
19
|
self.urls = ["https://github.com/zdavatz/oddb2xml"] # gem.homepage
|
20
20
|
|
21
21
|
# gem.add_runtime_dependency
|
22
|
-
self.extra_deps << ['rubyzip']
|
22
|
+
self.extra_deps << ['rubyzip', '~> 0.9.9']
|
23
23
|
self.extra_deps << ['archive-tar-minitar']
|
24
24
|
self.extra_deps << ['mechanize', '~> 2.5.1']
|
25
25
|
self.extra_deps << ['nokogiri']
|
data/lib/oddb2xml/downloader.rb
CHANGED
data/lib/oddb2xml/extractor.rb
CHANGED
@@ -3,6 +3,7 @@
|
|
3
3
|
require 'nokogiri'
|
4
4
|
require 'spreadsheet'
|
5
5
|
require 'stringio'
|
6
|
+
require 'rubyXL'
|
6
7
|
|
7
8
|
module Oddb2xml
|
8
9
|
module TxtExtractorMethods
|
@@ -197,6 +198,7 @@ module Oddb2xml
|
|
197
198
|
end
|
198
199
|
class SwissmedicExtractor < Extractor
|
199
200
|
def initialize(filename, type)
|
201
|
+
@filename = filename
|
200
202
|
@type = type
|
201
203
|
if type == :orphan
|
202
204
|
book = Spreadsheet.open(filename, 'rb')
|
@@ -224,6 +226,7 @@ module Oddb2xml
|
|
224
226
|
end
|
225
227
|
end
|
226
228
|
end
|
229
|
+
cleanup_file
|
227
230
|
data.uniq
|
228
231
|
end
|
229
232
|
def to_hash # Packungen.xls
|
@@ -261,24 +264,17 @@ module Oddb2xml
|
|
261
264
|
end
|
262
265
|
end
|
263
266
|
end
|
267
|
+
cleanup_file
|
264
268
|
data
|
265
269
|
end
|
266
270
|
private
|
267
|
-
def
|
271
|
+
def cleanup_file
|
268
272
|
begin
|
269
|
-
|
270
|
-
|
271
|
-
|
272
|
-
number = number.rjust(5, '0') if ptrn == /^\d{5}$/
|
273
|
-
if number =~ ptrn
|
274
|
-
return number
|
275
|
-
else
|
276
|
-
nil
|
277
|
-
end
|
278
|
-
rescue NoMethodError
|
279
|
-
nil
|
280
|
-
end
|
273
|
+
File.unlink(@filename) if File.exists?(@filename)
|
274
|
+
rescue Errno::EACCES # Permission Denied on Windows
|
275
|
+
end unless defined?(RSpec)
|
281
276
|
end
|
277
|
+
|
282
278
|
def calc_checksum(str)
|
283
279
|
str = str.strip
|
284
280
|
sum = 0
|
data/lib/oddb2xml/version.rb
CHANGED
Binary file
|
Binary file
|
data/spec/extractor_spec.rb
CHANGED
@@ -63,9 +63,9 @@ describe Oddb2xml::SwissmedicInfoExtractor do
|
|
63
63
|
subject { Oddb2xml::SwissmedicInfoExtractor.new("") }
|
64
64
|
it { expect(subject.to_hash).to be_empty }
|
65
65
|
end
|
66
|
-
context 'can parse
|
66
|
+
context 'can parse swissmedic_packages.xlsx' do
|
67
67
|
it {
|
68
|
-
filename = File.join(File.dirname(__FILE__), 'data/
|
68
|
+
filename = File.join(File.dirname(__FILE__), 'data/swissmedic_packages.xlsx')
|
69
69
|
@packs = Oddb2xml::SwissmedicExtractor.new(filename, :package).to_hash
|
70
70
|
expect(@packs.size).to eq(14)
|
71
71
|
first = @packs.first[1]
|
@@ -77,18 +77,19 @@ describe Oddb2xml::SwissmedicInfoExtractor do
|
|
77
77
|
expect(@packs.first[0].to_s).to eq('00274001')
|
78
78
|
}
|
79
79
|
end
|
80
|
-
context 'can parse
|
80
|
+
context 'can parse swissmedic_fridges.xlsx' do
|
81
81
|
it {
|
82
|
-
filename = File.join(File.dirname(__FILE__), 'data/
|
82
|
+
filename = File.join(File.dirname(__FILE__), 'data/swissmedic_fridges.xlsx')
|
83
83
|
@packs = Oddb2xml::SwissmedicExtractor.new(filename, :fridge).to_arry
|
84
84
|
expect(@packs.size).to eq(17)
|
85
85
|
expect(@packs[0]).to eq("58618")
|
86
86
|
expect(@packs[1]).to eq("00696")
|
87
87
|
}
|
88
88
|
end
|
89
|
-
context 'can parse
|
89
|
+
context 'can parse swissmedic_orphans.xls' do
|
90
90
|
it {
|
91
|
-
filename = File.join(File.dirname(__FILE__), 'data/
|
91
|
+
filename = File.join(File.dirname(__FILE__), 'data/swissmedic_orphans.xls')
|
92
|
+
expect(File.exists?(filename)).to eq(true), "File #{filename} must exists"
|
92
93
|
@packs = Oddb2xml::SwissmedicExtractor.new(filename, :orphan).to_arry
|
93
94
|
expect(@packs.size).to eq(72)
|
94
95
|
expect(@packs.first).to eq("62132")
|
data/spec/spec_helper.rb
CHANGED
@@ -72,26 +72,29 @@ module ServerMockHelper
|
|
72
72
|
end
|
73
73
|
def setup_swissmedic_server_mock
|
74
74
|
host = 'www.swissmedic.ch'
|
75
|
-
{
|
76
|
-
:orphans => {:html => '/
|
77
|
-
:fridges => {:html => '/
|
78
|
-
:packages => {:html => '/
|
75
|
+
{
|
76
|
+
:orphans => {:html => '/arzneimittel/00156/00221/00222/00223/00224/00227/00228/index.html?lang=de', :xls => '/download'},
|
77
|
+
:fridges => {:html => '/arzneimittel/00156/00221/00222/00235/index.html?lang=de', :xls => '/download'},
|
78
|
+
:packages => {:html => '/arzneimittel/00156/00221/00222/00230/index.html?lang=de', :xls => '/download'},
|
79
79
|
}.each_pair do |type, urls|
|
80
80
|
# html (dummy)
|
81
81
|
stub_html_url = "http://#{host}" + urls[:html]
|
82
|
-
|
82
|
+
filename = File.expand_path("../data/swissmedic_#{type.to_s}.html", __FILE__)
|
83
|
+
stub_response = File.read(filename)
|
83
84
|
stub_request(:get, stub_html_url).
|
84
|
-
|
85
|
-
'Accept' => '*/*',
|
86
|
-
'Host' => host,
|
87
|
-
}).
|
85
|
+
with(:headers => {'Accept'=>'*/*', 'Accept-Charset'=>'ISO-8859-1,utf-8;q=0.7,*;q=0.7', 'Accept-Encoding'=>'gzip,deflate,identity', 'Accept-Language'=>'en-us,en;q=0.5', 'Connection'=>'keep-alive', 'Host'=> host, 'Keep-Alive'=>'300', 'User-Agent'=>'Mozilla/5.0 (X11; Linux x86_64; rv:16.0) Gecko/20100101 Firefox/16.0'}).
|
88
86
|
to_return(
|
89
87
|
:status => 200,
|
90
88
|
:headers => {'Content-Type' => 'text/html; charset=utf-8'},
|
91
89
|
:body => stub_response)
|
92
90
|
# xls
|
93
|
-
|
94
|
-
|
91
|
+
if type == :orphans
|
92
|
+
stub_xls_url = "http://#{host}" + urls[:xls] + "/swissmedic_#{type.to_s}.xls"
|
93
|
+
stub_response = File.read(File.expand_path("../data/swissmedic_#{type.to_s}.xls", __FILE__))
|
94
|
+
else
|
95
|
+
stub_xls_url = "http://#{host}" + urls[:xls] + "/swissmedic_#{type.to_s}.xlsx"
|
96
|
+
stub_response = File.read(File.expand_path("../data/swissmedic_#{type.to_s}.xlsx", __FILE__))
|
97
|
+
end
|
95
98
|
stub_request(:get, stub_xls_url).
|
96
99
|
with(:headers => {
|
97
100
|
'Accept' => '*/*',
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: oddb2xml
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.6.
|
4
|
+
version: 1.6.9
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -16,17 +16,17 @@ dependencies:
|
|
16
16
|
requirement: !ruby/object:Gem::Requirement
|
17
17
|
none: false
|
18
18
|
requirements:
|
19
|
-
- -
|
19
|
+
- - ~>
|
20
20
|
- !ruby/object:Gem::Version
|
21
|
-
version:
|
21
|
+
version: 0.9.9
|
22
22
|
type: :runtime
|
23
23
|
prerelease: false
|
24
24
|
version_requirements: !ruby/object:Gem::Requirement
|
25
25
|
none: false
|
26
26
|
requirements:
|
27
|
-
- -
|
27
|
+
- - ~>
|
28
28
|
- !ruby/object:Gem::Version
|
29
|
-
version:
|
29
|
+
version: 0.9.9
|
30
30
|
- !ruby/object:Gem::Dependency
|
31
31
|
name: archive-tar-minitar
|
32
32
|
requirement: !ruby/object:Gem::Requirement
|
@@ -245,17 +245,17 @@ files:
|
|
245
245
|
- spec/data/swissindex.xml
|
246
246
|
- spec/data/swissindex_nonpharma.xml
|
247
247
|
- spec/data/swissindex_pharma.xml
|
248
|
-
- spec/data/swissmedic_fridge.xlsx
|
249
248
|
- spec/data/swissmedic_fridges.html
|
250
249
|
- spec/data/swissmedic_fridges.xls
|
250
|
+
- spec/data/swissmedic_fridges.xlsx
|
251
251
|
- spec/data/swissmedic_info.html
|
252
252
|
- spec/data/swissmedic_info.zip
|
253
253
|
- spec/data/swissmedic_info_2.html
|
254
|
-
- spec/data/swissmedic_orphan.xls
|
255
254
|
- spec/data/swissmedic_orphans.html
|
256
255
|
- spec/data/swissmedic_orphans.xls
|
257
|
-
- spec/data/swissmedic_package.xlsx
|
258
256
|
- spec/data/swissmedic_packages.html
|
257
|
+
- spec/data/swissmedic_packages.xls
|
258
|
+
- spec/data/swissmedic_packages.xlsx
|
259
259
|
- spec/data/wsdl.xml
|
260
260
|
- spec/data/wsdl_nonpharma.xml
|
261
261
|
- spec/data/wsdl_pharma.xml
|
File without changes
|
File without changes
|