oddb2xml 1.2.6 → 1.2.9
Sign up to get free protection for your applications and to get access to all the features.
- data/History.txt +19 -0
- data/Manifest.txt +5 -1
- data/README.md +12 -6
- data/lib/oddb2xml/builder.rb +61 -22
- data/lib/oddb2xml/cli.rb +110 -76
- data/lib/oddb2xml/downloader.rb +52 -11
- data/lib/oddb2xml/extractor.rb +47 -6
- data/lib/oddb2xml/version.rb +1 -1
- data/spec/compressor_spec.rb +4 -4
- data/spec/data/{ywesee_bm_update.txt → oddb2xml_files_bm_update.txt} +0 -0
- data/spec/data/oddb2xml_files_lppv.txt +4 -0
- data/spec/data/oddb2xml_files_nonpharma.xls +0 -0
- data/spec/downloader_spec.rb +67 -27
- data/spec/spec_helper.rb +35 -5
- metadata +31 -29
data/History.txt
CHANGED
@@ -1,3 +1,22 @@
|
|
1
|
+
=== 1.2.9 / 01.02.2013
|
2
|
+
|
3
|
+
* Remove ARTLIM and LIMCD
|
4
|
+
* Update to use swissINDEX if duplicated nonpharma
|
5
|
+
* Merge branch 'master' of ywesee.github.com:zdavatz/oddb2xml
|
6
|
+
* Improve Cli#run crearly
|
7
|
+
|
8
|
+
=== 1.2.8 / 01.02.2013
|
9
|
+
|
10
|
+
* Update SMCAT to use Packungen.xls
|
11
|
+
* Merge branch 'master' of ywesee.github.com:zdavatz/oddb2xml
|
12
|
+
* Add additional Non-Pharma products
|
13
|
+
|
14
|
+
=== 1.2.7 / 31.01.2013
|
15
|
+
|
16
|
+
* Update to use lppv for article.xml and oddb.dat
|
17
|
+
* Update to use pharmacode if SwissmedicNo5 == '0'
|
18
|
+
* Update to include limitations in It-Codes
|
19
|
+
|
1
20
|
=== 1.2.6 / 30.01.2013
|
2
21
|
|
3
22
|
* Update to exclude 14-EAN for oddb_with_migel.dat
|
data/Manifest.txt
CHANGED
@@ -19,12 +19,17 @@ spec/cli_spec.rb
|
|
19
19
|
spec/compressor_spec.rb
|
20
20
|
spec/data/XMLPublications.zip
|
21
21
|
spec/data/epha_interactions.csv
|
22
|
+
spec/data/oddb2xml_files_bm_update.txt
|
23
|
+
spec/data/oddb2xml_files_lppv.txt
|
22
24
|
spec/data/oddb_article.xml
|
23
25
|
spec/data/oddb_fi.xml
|
24
26
|
spec/data/oddb_fi_product.xml
|
25
27
|
spec/data/oddb_limitation.xml
|
26
28
|
spec/data/oddb_product.xml
|
27
29
|
spec/data/oddb_substance.xml
|
30
|
+
spec/data/oddb2xml_files_nonpharma.xls
|
31
|
+
spec/data/oddb2xml_files_lppv.txt
|
32
|
+
spec/data/oddb2xml_files_bm_update.txt
|
28
33
|
spec/data/swissindex.xml
|
29
34
|
spec/data/swissindex_nonpharma.xml
|
30
35
|
spec/data/swissindex_pharma.xml
|
@@ -38,7 +43,6 @@ spec/data/swissmedic_orphans.xls
|
|
38
43
|
spec/data/wsdl.xml
|
39
44
|
spec/data/wsdl_nonpharma.xml
|
40
45
|
spec/data/wsdl_pharma.xml
|
41
|
-
spec/data/ywesee_bm_update.txt
|
42
46
|
spec/downloader_spec.rb
|
43
47
|
spec/extractor_spec.rb
|
44
48
|
spec/spec_helper.rb
|
data/README.md
CHANGED
@@ -42,18 +42,21 @@ see `--help`.
|
|
42
42
|
|
43
43
|
```
|
44
44
|
$ oddb2xml --help
|
45
|
-
oddb2xml ver.1.2.
|
45
|
+
oddb2xml ver.1.2.7
|
46
46
|
Usage:
|
47
47
|
oddb2xml [option]
|
48
48
|
-a T, --append=T Additional target. T, only 'nonpharma' is available.
|
49
49
|
-c F, --compress=F Compress format F. {tar.gz|zip}
|
50
|
-
-f
|
51
|
-
|
52
|
-
-o
|
53
|
-
-
|
50
|
+
-f F, --format=F File format F, default is xml. {xml|dat}
|
51
|
+
If F is given, -o option is ignored.
|
52
|
+
-o O, --optional=O Optional output. O, only 'fi' is available.
|
53
|
+
-i I, --include=I Include target option for 'dat' format. only 'ean14' is available.
|
54
|
+
'xml' format includes always ean14 records.
|
55
|
+
-t S, --tag-suffix=S XML tag suffix S. Default is none. [A-z0-9]
|
54
56
|
If S is given, it is also used as prefix of filename.
|
55
|
-
|
57
|
+
-h, --help Show this help message.
|
56
58
|
|
59
|
+
```
|
57
60
|
|
58
61
|
## Option examples
|
59
62
|
|
@@ -81,6 +84,9 @@ If you need the XSD files, generate them yourself using the javabeans tool:
|
|
81
84
|
|
82
85
|
this will generate you a valid XSD file that can be used to validate against the XML file.
|
83
86
|
|
87
|
+
i.e.:
|
88
|
+
* /home/zeno/.software/xmlbeans-2.6.0/bin/inst2xsd oddb_article.xml -outPrefix oddb_article
|
89
|
+
|
84
90
|
## XML files
|
85
91
|
|
86
92
|
xml files generated are:
|
data/lib/oddb2xml/builder.rb
CHANGED
@@ -17,18 +17,19 @@ end
|
|
17
17
|
|
18
18
|
module Oddb2xml
|
19
19
|
class Builder
|
20
|
-
attr_accessor :subject, :index, :items, :flags,
|
21
|
-
:actions,
|
22
|
-
:
|
23
|
-
:
|
24
|
-
:tag_suffix
|
20
|
+
attr_accessor :subject, :index, :items, :flags, :lppvs,
|
21
|
+
:actions, :migel, :orphans, :fridges,
|
22
|
+
:infos, :packs,
|
23
|
+
:ean14, :tag_suffix
|
25
24
|
def initialize
|
26
25
|
@subject = nil
|
27
26
|
@index = {}
|
28
27
|
@items = {}
|
29
28
|
@flags = {}
|
29
|
+
@lppvs = {}
|
30
30
|
@infos = {}
|
31
31
|
@packs = {}
|
32
|
+
@migel = {}
|
32
33
|
@actions = []
|
33
34
|
@orphans = []
|
34
35
|
@fridges = []
|
@@ -59,14 +60,39 @@ module Oddb2xml
|
|
59
60
|
@articles = [] # base is 'DE'
|
60
61
|
@index['DE'].each_pair do |pharmacode, index|
|
61
62
|
object = {
|
62
|
-
:de
|
63
|
-
:fr
|
63
|
+
:de => index,
|
64
|
+
:fr => @index['FR'][pharmacode],
|
64
65
|
}
|
66
|
+
if migel = @migel[pharmacode]
|
67
|
+
# delete duplicates
|
68
|
+
@migel[pharmacode] = nil
|
69
|
+
end
|
65
70
|
if seq = @items[pharmacode]
|
66
71
|
object[:seq] = seq
|
67
72
|
end
|
68
73
|
@articles << object
|
69
74
|
end
|
75
|
+
# add
|
76
|
+
@migel.values.compact.each do |migel|
|
77
|
+
next if migel[:pharmacode].empty?
|
78
|
+
object = {}
|
79
|
+
%w[de fr].each do |lang|
|
80
|
+
pac = {
|
81
|
+
:ean => migel[:ean],
|
82
|
+
:pharmacode => migel[:pharmacode],
|
83
|
+
:status => 'I',
|
84
|
+
:stat_date => '',
|
85
|
+
:lang => lang.capitalize,
|
86
|
+
:desc => migel["desc_#{lang}".intern],
|
87
|
+
:atc_code => '',
|
88
|
+
:additional_desc => migel[:additional_desc],
|
89
|
+
:company_ean => migel[:company_ean],
|
90
|
+
:company_name => migel[:company_name],
|
91
|
+
}
|
92
|
+
object[lang.intern] = pac
|
93
|
+
end
|
94
|
+
@articles << object
|
95
|
+
end
|
70
96
|
end
|
71
97
|
end
|
72
98
|
def prepare_substances
|
@@ -179,11 +205,11 @@ module Oddb2xml
|
|
179
205
|
) {
|
180
206
|
@limitations.each do |lim|
|
181
207
|
xml.LIM('DT' => '') {
|
182
|
-
xml.LIMCD lim[:key] # swissmedic_number8 or
|
208
|
+
xml.LIMCD lim[:key] # swissmedic_number8, swissmedic_number5 or pharmacode
|
183
209
|
xml.IT lim[:it]
|
184
210
|
xml.LIMTYP lim[:type]
|
185
211
|
xml.LIMVAL lim[:value]
|
186
|
-
xml.LIMNAMEBAG lim[:code] # LIMCD
|
212
|
+
xml.LIMNAMEBAG lim[:code] # original LIMCD
|
187
213
|
xml.LIMNIV lim[:niv]
|
188
214
|
xml.DSCRD lim[:desc_de]
|
189
215
|
xml.DSCRF lim[:desc_fr]
|
@@ -455,6 +481,11 @@ module Oddb2xml
|
|
455
481
|
if obj[:seq]
|
456
482
|
bg_pac = obj[:seq][:packages][de_pac[:pharmacode]]
|
457
483
|
end
|
484
|
+
if de_pac[:ean].length == 13
|
485
|
+
num = de_pac[:ean][4,8].intern # :swissmedic_number5
|
486
|
+
elsif bg_pac
|
487
|
+
num = bg_pac[:swissmedic_number8].intern
|
488
|
+
end
|
458
489
|
xml.ART('DT' => '') {
|
459
490
|
xml.PHAR de_pac[:pharmacode] unless de_pac[:pharmacode].empty?
|
460
491
|
#xml.GRPCD
|
@@ -463,8 +494,12 @@ module Oddb2xml
|
|
463
494
|
if obj[:seq]
|
464
495
|
xml.PRDNO obj[:seq][:product_key] unless obj[:seq][:product_key].empty?
|
465
496
|
end
|
466
|
-
if bg_pac
|
497
|
+
if bg_pac # bag xml
|
467
498
|
xml.SMCAT bg_pac[:swissmedic_category] unless bg_pac[:swissmedic_category].empty?
|
499
|
+
elsif @packs[num] and @packs[num][:swissmedic_category] # Packungen.xls
|
500
|
+
xml.SMCAT @packs[num][:swissmedic_category]
|
501
|
+
end
|
502
|
+
if bg_pac
|
468
503
|
xml.SMNO bg_pac[:swissmedic_number8] unless bg_pac[:swissmedic_number8].empty?
|
469
504
|
end
|
470
505
|
#xml.HOSPCD
|
@@ -578,18 +613,16 @@ module Oddb2xml
|
|
578
613
|
#xml.LINENO
|
579
614
|
#xml.CDVAL
|
580
615
|
#}
|
581
|
-
|
582
|
-
|
583
|
-
xml.ARTLIM {
|
584
|
-
xml.LIMCD lim[:code] unless lim[:code].empty?
|
585
|
-
}
|
586
|
-
end
|
587
|
-
end
|
588
|
-
#xml.ARTINS {
|
589
|
-
#xml.VDAT
|
590
|
-
#xml.INCD
|
591
|
-
#xml.NINCD
|
616
|
+
#xml.ARTLIM {
|
617
|
+
# xml.LIMCD
|
592
618
|
#}
|
619
|
+
if @lppvs[de_pac[:ean]]
|
620
|
+
xml.ARTINS {
|
621
|
+
#xml.VDAT
|
622
|
+
#xml.INCD
|
623
|
+
xml.NINCD 20
|
624
|
+
}
|
625
|
+
end
|
593
626
|
}
|
594
627
|
end
|
595
628
|
xml.RESULT {
|
@@ -763,7 +796,13 @@ module Oddb2xml
|
|
763
796
|
).to_s[0, DAT_LEN[:ABEZ]].gsub(/"/, '')
|
764
797
|
row << "%#{DAT_LEN[:PRMO]}s" % (pac ? format_price(pac[:prices][:exf_price][:price].to_s) : ('0' * DAT_LEN[:PRMO]))
|
765
798
|
row << "%#{DAT_LEN[:PRPU]}s" % (pac ? format_price(pac[:prices][:pub_price][:price].to_s) : ('0' * DAT_LEN[:PRPU]))
|
766
|
-
row << "%#{DAT_LEN[:CKZL]}s" % (
|
799
|
+
row << "%#{DAT_LEN[:CKZL]}s" % if (@lppvs[de_pac[:ean]])
|
800
|
+
'2'
|
801
|
+
elsif pac # sl_entry
|
802
|
+
'1'
|
803
|
+
else
|
804
|
+
'3'
|
805
|
+
end
|
767
806
|
row << "%#{DAT_LEN[:CLAG]}s" % if ((num && num.to_s =~ /(\d{5})(\d{3})/) and
|
768
807
|
@fridges.include?($1.to_s))
|
769
808
|
'1'
|
data/lib/oddb2xml/cli.rb
CHANGED
@@ -17,94 +17,40 @@ module Oddb2xml
|
|
17
17
|
@mutex = Mutex.new
|
18
18
|
@items = {} # Items from Preparations.xml in BAG
|
19
19
|
@index = {} # Base index from swissINDEX
|
20
|
-
@flags = {} # narcotics flag
|
20
|
+
@flags = {} # narcotics flag files repo
|
21
|
+
@lppvs = {} # lppv.txt from files repo
|
21
22
|
@infos = {} # [option] FI from SwissmedicInfo
|
22
23
|
@packs = {} # [option] Packungen from Swissmedic for dat
|
24
|
+
@migel = {} # [addition] additional Non Pharma products from files repo
|
23
25
|
@actions = [] # [addition] interactions from epha
|
24
26
|
@orphans = [] # [addition] Orphaned drugs from Swissmedic xls
|
25
27
|
@fridges = [] # [addition] ReFridge drugs from Swissmedic xls
|
26
28
|
LANGUAGES.each do |lang|
|
27
29
|
@index[lang] = {}
|
28
30
|
end
|
31
|
+
@_message = false
|
29
32
|
end
|
30
33
|
def run
|
31
34
|
threads = []
|
32
|
-
# swissmedic-info
|
33
35
|
if @options[:format] != :dat
|
34
36
|
if @options[:fi]
|
35
|
-
threads <<
|
36
|
-
downloader = SwissmedicInfoDownloader.new
|
37
|
-
xml = downloader.download
|
38
|
-
@mutex.synchronize do
|
39
|
-
hsh = SwissmedicInfoExtractor.new(xml).to_hash
|
40
|
-
@infos = hsh
|
41
|
-
end
|
42
|
-
end
|
43
|
-
end
|
44
|
-
# swissmedic - orphan, fridge
|
45
|
-
[:orphans, :fridges].each do |type|
|
46
|
-
threads << Thread.new do
|
47
|
-
downloader = SwissmedicDownloader.new(type)
|
48
|
-
bin = downloader.download
|
49
|
-
self.instance_variable_set("@#{type.to_s}", SwissmedicExtractor.new(bin, type).to_arry)
|
50
|
-
end
|
51
|
-
end
|
52
|
-
# epha
|
53
|
-
threads << Thread.new do
|
54
|
-
downloader = EphaDownloader.new
|
55
|
-
str = downloader.download
|
56
|
-
@mutex.synchronize do
|
57
|
-
@actions = EphaExtractor.new(str).to_arry
|
58
|
-
end
|
59
|
-
end
|
60
|
-
else # dat
|
61
|
-
# swissmedic - package
|
62
|
-
threads << Thread.new do
|
63
|
-
downloader = SwissmedicDownloader.new(:packages)
|
64
|
-
bin = downloader.download
|
65
|
-
@mutex.synchronize do
|
66
|
-
@packs = SwissmedicExtractor.new(bin, :packages).to_hash
|
67
|
-
end
|
37
|
+
threads << download(:fachinfo) # swissmedic-info
|
68
38
|
end
|
69
|
-
|
70
|
-
|
71
|
-
threads << Thread.new do
|
72
|
-
downloader = YweseeBMDownloader.new
|
73
|
-
str = downloader.download
|
74
|
-
@mutex.synchronize do
|
75
|
-
@flags = YweseeBMExtractor.new(str).to_hash
|
39
|
+
[:orphan, :fridge].each do |type|
|
40
|
+
threads << download(type) # swissmedic
|
76
41
|
end
|
42
|
+
threads << download(:interaction) # epha
|
77
43
|
end
|
78
|
-
|
79
|
-
|
80
|
-
downloader = BagXmlDownloader.new(@options)
|
81
|
-
xml = downloader.download
|
82
|
-
@mutex.synchronize do
|
83
|
-
hsh = BagXmlExtractor.new(xml).to_hash
|
84
|
-
@items = hsh
|
85
|
-
end
|
44
|
+
if @options[:nonpharma]
|
45
|
+
threads << download(:migel) # oddb2xml_files
|
86
46
|
end
|
87
|
-
|
47
|
+
threads << download(:package) # swissmedic
|
48
|
+
threads << download(:bm_update) # oddb2xml_files
|
49
|
+
threads << download(:lppv) # oddb2xml_files
|
50
|
+
threads << download(:bag) # bag.e-mediat
|
88
51
|
LANGUAGES.each do |lang|
|
89
|
-
# swissindex
|
90
52
|
types.each do |type|
|
91
|
-
threads <<
|
92
|
-
downloader = SwissIndexDownloader.new(@options, type, lang)
|
93
|
-
begin
|
94
|
-
xml = downloader.download
|
95
|
-
rescue SystemExit
|
96
|
-
@mutex.synchronize do
|
97
|
-
unless @_message # hook only one exit
|
98
|
-
@_message = true
|
99
|
-
exit
|
100
|
-
end
|
101
|
-
end
|
102
|
-
end
|
103
|
-
@mutex.synchronize do
|
104
|
-
hsh = SwissIndexExtractor.new(xml, type).to_hash
|
105
|
-
@index[lang][type] = hsh
|
106
|
-
end
|
107
|
-
end
|
53
|
+
threads << download(:index, type, lang) # swissindex
|
108
54
|
end
|
109
55
|
end
|
110
56
|
begin
|
@@ -141,15 +87,16 @@ module Oddb2xml
|
|
141
87
|
builder.subject = sbj
|
142
88
|
end
|
143
89
|
# common sources
|
144
|
-
builder.items
|
145
|
-
builder.flags
|
146
|
-
|
147
|
-
|
148
|
-
builder.send("#{addition}=".intern, self.instance_variable_get("@#{addition}"))
|
149
|
-
end
|
150
|
-
# optionals
|
90
|
+
builder.items = @items
|
91
|
+
builder.flags = @flags
|
92
|
+
builder.lppvs = @lppvs
|
93
|
+
# optional sources
|
151
94
|
builder.infos = @infos
|
152
95
|
builder.packs = @packs
|
96
|
+
# additional sources
|
97
|
+
%w[actions orphans fridges migel].each do |addition|
|
98
|
+
builder.send("#{addition}=".intern, self.instance_variable_get("@#{addition}"))
|
99
|
+
end
|
153
100
|
builder.tag_suffix = @options[:tag_suffix]
|
154
101
|
end
|
155
102
|
output = ''
|
@@ -182,6 +129,93 @@ module Oddb2xml
|
|
182
129
|
raise Interrupt
|
183
130
|
end
|
184
131
|
end
|
132
|
+
def download(what, type=nil, lang=nil)
|
133
|
+
case what
|
134
|
+
when :fachinfo
|
135
|
+
Thread.new do
|
136
|
+
downloader = SwissmedicInfoDownloader.new
|
137
|
+
xml = downloader.download
|
138
|
+
@mutex.synchronize do
|
139
|
+
hsh = SwissmedicInfoExtractor.new(xml).to_hash
|
140
|
+
@infos = hsh
|
141
|
+
end
|
142
|
+
end
|
143
|
+
when :orphan, :fridge
|
144
|
+
type = (what.to_s + "s").intern
|
145
|
+
Thread.new do
|
146
|
+
downloader = SwissmedicDownloader.new(type)
|
147
|
+
bin = downloader.download
|
148
|
+
self.instance_variable_set("@#{type.to_s}", SwissmedicExtractor.new(bin, type).to_arry)
|
149
|
+
end
|
150
|
+
when :interaction
|
151
|
+
Thread.new do
|
152
|
+
downloader = EphaDownloader.new
|
153
|
+
str = downloader.download
|
154
|
+
@mutex.synchronize do
|
155
|
+
@actions = EphaExtractor.new(str).to_arry
|
156
|
+
end
|
157
|
+
end
|
158
|
+
when :migel
|
159
|
+
Thread.new do
|
160
|
+
downloader = MigelDownloader.new
|
161
|
+
bin = downloader.download
|
162
|
+
@mutex.synchronize do
|
163
|
+
@migel = MigelExtractor.new(bin).to_hash
|
164
|
+
end
|
165
|
+
end
|
166
|
+
when :package
|
167
|
+
Thread.new do
|
168
|
+
downloader = SwissmedicDownloader.new(:packages)
|
169
|
+
bin = downloader.download
|
170
|
+
@mutex.synchronize do
|
171
|
+
@packs = SwissmedicExtractor.new(bin, :packages).to_hash
|
172
|
+
end
|
173
|
+
end
|
174
|
+
when :bm_update
|
175
|
+
Thread.new do
|
176
|
+
downloader = BMUpdateDownloader.new
|
177
|
+
str = downloader.download
|
178
|
+
@mutex.synchronize do
|
179
|
+
@flags = BMUpdateExtractor.new(str).to_hash
|
180
|
+
end
|
181
|
+
end
|
182
|
+
when :lppv
|
183
|
+
Thread.new do
|
184
|
+
downloader = LppvDownloader.new
|
185
|
+
str = downloader.download
|
186
|
+
@mutex.synchronize do
|
187
|
+
@lppvs = LppvExtractor.new(str).to_hash
|
188
|
+
end
|
189
|
+
end
|
190
|
+
when :bag
|
191
|
+
Thread.new do
|
192
|
+
downloader = BagXmlDownloader.new(@options)
|
193
|
+
xml = downloader.download
|
194
|
+
@mutex.synchronize do
|
195
|
+
hsh = BagXmlExtractor.new(xml).to_hash
|
196
|
+
@items = hsh
|
197
|
+
end
|
198
|
+
end
|
199
|
+
when :index
|
200
|
+
Thread.new do
|
201
|
+
downloader = SwissIndexDownloader.new(@options, type, lang)
|
202
|
+
begin
|
203
|
+
xml = downloader.download
|
204
|
+
rescue SystemExit
|
205
|
+
@mutex.synchronize do
|
206
|
+
unless @_message # hook only one exit
|
207
|
+
@_message = true
|
208
|
+
exit
|
209
|
+
end
|
210
|
+
end
|
211
|
+
end
|
212
|
+
@mutex.synchronize do
|
213
|
+
hsh = SwissIndexExtractor.new(xml, type).to_hash
|
214
|
+
@index[lang][type] = hsh
|
215
|
+
end
|
216
|
+
end
|
217
|
+
end
|
218
|
+
end
|
185
219
|
def compress
|
186
220
|
compressor = Compressor.new(prefix, @options)
|
187
221
|
files.values.each do |file|
|
data/lib/oddb2xml/downloader.rb
CHANGED
@@ -42,7 +42,7 @@ module Oddb2xml
|
|
42
42
|
xml << bytes
|
43
43
|
bytes = nil
|
44
44
|
end
|
45
|
-
io.close
|
45
|
+
io.close if io.respond_to?(:close)
|
46
46
|
end
|
47
47
|
end
|
48
48
|
end
|
@@ -162,7 +162,30 @@ XML
|
|
162
162
|
rescue Timeout::Error
|
163
163
|
retrievable? ? retry : raise
|
164
164
|
ensure
|
165
|
-
io.close
|
165
|
+
io.close if io and !io.closed?
|
166
|
+
if File.exists?(file)
|
167
|
+
File.unlink(file)
|
168
|
+
end
|
169
|
+
end
|
170
|
+
end
|
171
|
+
end
|
172
|
+
class MigelDownloader < Downloader
|
173
|
+
def init
|
174
|
+
super
|
175
|
+
@url ||= 'https://github.com/zdavatz/oddb2xml_files/raw/master/NON-Pharma.xls'
|
176
|
+
end
|
177
|
+
def download
|
178
|
+
file = "oddb2xml_files_nonpharma.xls"
|
179
|
+
begin
|
180
|
+
response = @agent.get(@url)
|
181
|
+
response.save_as(file)
|
182
|
+
response = nil # win
|
183
|
+
io = File.open(file, 'rb')
|
184
|
+
return io.read
|
185
|
+
rescue Timeout::Error
|
186
|
+
retrievable? ? retry : raise
|
187
|
+
ensure
|
188
|
+
io.close if io and !io.closed? # win
|
166
189
|
if File.exists?(file)
|
167
190
|
File.unlink(file)
|
168
191
|
end
|
@@ -228,20 +251,16 @@ XML
|
|
228
251
|
rescue Timeout::Error
|
229
252
|
retrievable? ? retry : raise
|
230
253
|
ensure
|
231
|
-
io.close
|
254
|
+
io.close if io and !io.closed? # win
|
232
255
|
if File.exists?(file)
|
233
256
|
File.unlink(file)
|
234
257
|
end
|
235
258
|
end
|
236
259
|
end
|
237
260
|
end
|
238
|
-
|
239
|
-
|
240
|
-
|
241
|
-
@url ||= 'http://www.ywesee.com/uploads/Main/BM_Update.txt'
|
242
|
-
end
|
243
|
-
def download
|
244
|
-
file = 'ywesee_bm_update.txt'
|
261
|
+
# txt filse
|
262
|
+
module TxtDownloadMethods
|
263
|
+
def download_as(file)
|
245
264
|
begin
|
246
265
|
response = @agent.get(@url)
|
247
266
|
response.save_as(file)
|
@@ -251,11 +270,33 @@ XML
|
|
251
270
|
rescue Timeout::Error
|
252
271
|
retrievable? ? retry : raise
|
253
272
|
ensure
|
254
|
-
io.close
|
273
|
+
io.close if io and !io.closed? # win
|
255
274
|
if File.exists?(file)
|
256
275
|
File.unlink(file)
|
257
276
|
end
|
258
277
|
end
|
259
278
|
end
|
260
279
|
end
|
280
|
+
class BMUpdateDownloader < Downloader
|
281
|
+
include TxtDownloadMethods
|
282
|
+
def init
|
283
|
+
super
|
284
|
+
@url ||= 'https://raw.github.com/zdavatz/oddb2xml_files/master/BM_Update.txt'
|
285
|
+
end
|
286
|
+
def download
|
287
|
+
file = 'oddb2xml_files_bm_update.txt'
|
288
|
+
download_as(file)
|
289
|
+
end
|
290
|
+
end
|
291
|
+
class LppvDownloader < Downloader
|
292
|
+
include TxtDownloadMethods
|
293
|
+
def init
|
294
|
+
super
|
295
|
+
@url ||= 'https://raw.github.com/zdavatz/oddb2xml_files/master/LPPV.txt'
|
296
|
+
end
|
297
|
+
def download
|
298
|
+
file = 'oddb2xml_files_lppv.txt'
|
299
|
+
download_as(file)
|
300
|
+
end
|
301
|
+
end
|
261
302
|
end
|
data/lib/oddb2xml/extractor.rb
CHANGED
@@ -70,15 +70,25 @@ module Oddb2xml
|
|
70
70
|
}
|
71
71
|
}
|
72
72
|
}
|
73
|
-
# limitations
|
73
|
+
# related all limitations
|
74
74
|
item[:packages][phar][:limitations] = []
|
75
75
|
limitations = Hash.new{|h,k| h[k] = [] }
|
76
|
-
# seq
|
76
|
+
# in seq
|
77
77
|
limitations[:seq] = (lims = seq.xpath('.//Limitations/Limitation')) ? lims.to_a : nil
|
78
|
-
#
|
78
|
+
# in it-codes
|
79
|
+
limitations[:itc] = (lims = seq.xpath('.//ItCodes/ItCode/Limitations/Limitation')) ? lims.to_a : nil
|
80
|
+
# in pac
|
79
81
|
limitations[:pac] = (lims = pac.xpath('.//Limitations/Limitation')) ? lims.to_a : nil
|
80
82
|
limitations.each_pair do |key, lims|
|
81
|
-
key =
|
83
|
+
key = case key
|
84
|
+
when :pac
|
85
|
+
item[:packages][phar][:swissmedic_number8]
|
86
|
+
when :seq
|
87
|
+
item[:swissmedic_number5]
|
88
|
+
when :itc
|
89
|
+
phar
|
90
|
+
end
|
91
|
+
key = phar if (key.empty? or key == '0')
|
82
92
|
lims.each do |lim|
|
83
93
|
limitation = {
|
84
94
|
:it => item[:it_code],
|
@@ -204,6 +214,30 @@ module Oddb2xml
|
|
204
214
|
end
|
205
215
|
end
|
206
216
|
end
|
217
|
+
class MigelExtractor < Extractor
|
218
|
+
def initialize(bin)
|
219
|
+
io = StringIO.new(bin)
|
220
|
+
book = Spreadsheet.open(io)
|
221
|
+
@sheet = book.worksheet(0)
|
222
|
+
end
|
223
|
+
def to_hash
|
224
|
+
data = {}
|
225
|
+
@sheet.each_with_index do |row, i|
|
226
|
+
next if i == 0
|
227
|
+
phar = row[1].to_s
|
228
|
+
data[phar] = {
|
229
|
+
:ean => row[0].to_i.to_s,
|
230
|
+
:pharmacode => phar,
|
231
|
+
:desc_de => row[3],
|
232
|
+
:desc_fr => row[4],
|
233
|
+
:additional_desc => row[5], # quantity
|
234
|
+
:company_name => row[6],
|
235
|
+
:company_ean => row[7].to_i.to_s,
|
236
|
+
}
|
237
|
+
end
|
238
|
+
data
|
239
|
+
end
|
240
|
+
end
|
207
241
|
class SwissmedicInfoExtractor < Extractor
|
208
242
|
def to_hash
|
209
243
|
data = Hash.new{|h,k| h[k] = [] }
|
@@ -257,18 +291,25 @@ module Oddb2xml
|
|
257
291
|
data
|
258
292
|
end
|
259
293
|
end
|
260
|
-
|
294
|
+
# txt files
|
295
|
+
module TxtMethods
|
261
296
|
def initialize(str)
|
262
297
|
@io = StringIO.new(str)
|
263
298
|
end
|
264
299
|
def to_hash
|
265
300
|
data = {}
|
266
301
|
while line = @io.gets
|
267
|
-
next
|
302
|
+
next unless line =~ /\d{13}/
|
268
303
|
ean = line.chomp.gsub("\"", '')
|
269
304
|
data[ean] = true
|
270
305
|
end
|
271
306
|
data
|
272
307
|
end
|
273
308
|
end
|
309
|
+
class BMUpdateExtractor < Extractor
|
310
|
+
include TxtMethods
|
311
|
+
end
|
312
|
+
class LppvExtractor < Extractor
|
313
|
+
include TxtMethods
|
314
|
+
end
|
274
315
|
end
|
data/lib/oddb2xml/version.rb
CHANGED
data/spec/compressor_spec.rb
CHANGED
@@ -35,7 +35,7 @@ describe Oddb2xml::Compressor do
|
|
35
35
|
end
|
36
36
|
context "when swiss prefix is given" do
|
37
37
|
before(:each) do
|
38
|
-
@compressor = Oddb2xml::Compressor.new('swiss', 'tar.gz')
|
38
|
+
@compressor = Oddb2xml::Compressor.new('swiss', {:compress_ext => 'tar.gz'})
|
39
39
|
end
|
40
40
|
it 'should have formated filename with datetime' do
|
41
41
|
@compressor.instance_variable_get(:@compress_file).
|
@@ -44,7 +44,7 @@ describe Oddb2xml::Compressor do
|
|
44
44
|
end
|
45
45
|
context "when tar.gz ext is given" do
|
46
46
|
before(:each) do
|
47
|
-
@compressor = Oddb2xml::Compressor.new('oddb', 'tar.gz')
|
47
|
+
@compressor = Oddb2xml::Compressor.new('oddb', {:compress_ext => 'tar.gz'})
|
48
48
|
end
|
49
49
|
it 'should have formated filename with datetime' do
|
50
50
|
@compressor.instance_variable_get(:@compress_file).
|
@@ -53,7 +53,7 @@ describe Oddb2xml::Compressor do
|
|
53
53
|
end
|
54
54
|
context "when zip ext is given" do
|
55
55
|
before(:each) do
|
56
|
-
@compressor = Oddb2xml::Compressor.new('oddb', 'zip')
|
56
|
+
@compressor = Oddb2xml::Compressor.new('oddb', {:compress_ext => 'zip'})
|
57
57
|
end
|
58
58
|
it 'should have formated filename with datetime' do
|
59
59
|
@compressor.instance_variable_get(:@compress_file).
|
@@ -83,7 +83,7 @@ describe Oddb2xml::Compressor do
|
|
83
83
|
end
|
84
84
|
context 'with zip' do
|
85
85
|
before(:each) do
|
86
|
-
@compressor = Oddb2xml::Compressor.new('oddb', 'zip')
|
86
|
+
@compressor = Oddb2xml::Compressor.new('oddb', {:compress_ext => 'zip'})
|
87
87
|
end
|
88
88
|
it_behaves_like 'any compressor'
|
89
89
|
end
|
File without changes
|
Binary file
|
data/spec/downloader_spec.rb
CHANGED
@@ -49,7 +49,7 @@ describe Oddb2xml::SwissIndexDownloader do
|
|
49
49
|
end
|
50
50
|
context 'Pharma with DE' do
|
51
51
|
before(:each) do
|
52
|
-
@downloader = Oddb2xml::SwissIndexDownloader.new(:pharma, 'DE')
|
52
|
+
@downloader = Oddb2xml::SwissIndexDownloader.new({}, :pharma, 'DE')
|
53
53
|
end
|
54
54
|
it_behaves_like 'any downloader'
|
55
55
|
context 'when download_by is called with DE' do
|
@@ -67,7 +67,7 @@ describe Oddb2xml::SwissIndexDownloader do
|
|
67
67
|
end
|
68
68
|
context 'NonPharma with FR' do
|
69
69
|
before(:each) do
|
70
|
-
@downloader = Oddb2xml::SwissIndexDownloader.new(:nonpharma, 'FR')
|
70
|
+
@downloader = Oddb2xml::SwissIndexDownloader.new({}, :nonpharma, 'FR')
|
71
71
|
end
|
72
72
|
it_behaves_like 'any downloader'
|
73
73
|
context 'when download_by is called with FR' do
|
@@ -94,13 +94,13 @@ describe Oddb2xml::SwissmedicDownloader do
|
|
94
94
|
end
|
95
95
|
it_behaves_like 'any downloader'
|
96
96
|
context 'download_by for orphans xls' do
|
97
|
-
let(:
|
98
|
-
it 'should return valid
|
99
|
-
|
100
|
-
|
97
|
+
let(:bin) { @downloader.download }
|
98
|
+
it 'should return valid Binary-String' do
|
99
|
+
bin.should be_a String
|
100
|
+
bin.bytes.should_not nil
|
101
101
|
end
|
102
102
|
it 'should clean up current directory' do
|
103
|
-
|
103
|
+
bin.should_not raise_error(Timeout::Error)
|
104
104
|
File.exist?('oddb_orphans.xls').should be(false)
|
105
105
|
end
|
106
106
|
end
|
@@ -111,13 +111,13 @@ describe Oddb2xml::SwissmedicDownloader do
|
|
111
111
|
@downloader = Oddb2xml::SwissmedicDownloader.new(:fridges)
|
112
112
|
end
|
113
113
|
context 'download_by for fridges xls' do
|
114
|
-
let(:
|
115
|
-
it 'should return valid
|
116
|
-
|
117
|
-
|
114
|
+
let(:bin) { @downloader.download }
|
115
|
+
it 'should return valid Binary-String' do
|
116
|
+
bin.should be_a String
|
117
|
+
bin.bytes.should_not nil
|
118
118
|
end
|
119
119
|
it 'should clean up current directory' do
|
120
|
-
|
120
|
+
bin.should_not raise_error(Timeout::Error)
|
121
121
|
File.exist?('oddb_fridges.xls').should be(false)
|
122
122
|
end
|
123
123
|
end
|
@@ -133,7 +133,7 @@ describe Oddb2xml::SwissmedicInfoDownloader do
|
|
133
133
|
it_behaves_like 'any downloader'
|
134
134
|
context 'when download is called' do
|
135
135
|
let(:xml) { @downloader.download }
|
136
|
-
it 'should parse zip to
|
136
|
+
it 'should parse zip to String' do
|
137
137
|
xml.should be_a String
|
138
138
|
xml.length.should_not == 0
|
139
139
|
end
|
@@ -157,34 +157,74 @@ describe Oddb2xml::EphaDownloader do
|
|
157
157
|
end
|
158
158
|
it_behaves_like 'any downloader'
|
159
159
|
context 'when download is called' do
|
160
|
-
let(:
|
161
|
-
it 'should read csv
|
162
|
-
|
163
|
-
|
160
|
+
let(:csv) { @downloader.download }
|
161
|
+
it 'should read csv as String' do
|
162
|
+
csv.should be_a String
|
163
|
+
csv.bytes.should_not nil
|
164
164
|
end
|
165
165
|
it 'should clean up current directory' do
|
166
|
-
|
166
|
+
csv.should_not raise_error(Timeout::Error)
|
167
167
|
File.exist?('epha_interactions.csv').should be(false)
|
168
168
|
end
|
169
169
|
end
|
170
170
|
end
|
171
171
|
|
172
|
-
describe Oddb2xml::
|
172
|
+
describe Oddb2xml::BMUpdateDownloader do
|
173
|
+
include ServerMockHelper
|
174
|
+
before(:each) do
|
175
|
+
setup_bm_update_server_mock
|
176
|
+
@downloader = Oddb2xml::BMUpdateDownloader.new
|
177
|
+
end
|
178
|
+
it_behaves_like 'any downloader'
|
179
|
+
context 'when download is called' do
|
180
|
+
let(:txt) { @downloader.download }
|
181
|
+
it 'should read txt as String' do
|
182
|
+
txt.should be_a String
|
183
|
+
txt.bytes.should_not nil
|
184
|
+
end
|
185
|
+
it 'should clean up current directory' do
|
186
|
+
txt.should_not raise_error(Timeout::Error)
|
187
|
+
File.exist?('oddb2xml_files_bm_update.txt').should be(false)
|
188
|
+
end
|
189
|
+
end
|
190
|
+
end
|
191
|
+
|
192
|
+
describe Oddb2xml::LppvDownloader do
|
193
|
+
include ServerMockHelper
|
194
|
+
before(:each) do
|
195
|
+
setup_lppv_server_mock
|
196
|
+
@downloader = Oddb2xml::LppvDownloader.new
|
197
|
+
end
|
198
|
+
it_behaves_like 'any downloader'
|
199
|
+
context 'when download is called' do
|
200
|
+
let(:txt) { @downloader.download }
|
201
|
+
it 'should read txt as String' do
|
202
|
+
txt.should be_a String
|
203
|
+
txt.bytes.should_not nil
|
204
|
+
end
|
205
|
+
it 'should clean up current directory' do
|
206
|
+
txt.should_not raise_error(Timeout::Error)
|
207
|
+
File.exist?('oddb2xml_files_lppv.txt').should be(false)
|
208
|
+
end
|
209
|
+
end
|
210
|
+
end
|
211
|
+
|
212
|
+
describe Oddb2xml::MigelDownloader do
|
173
213
|
include ServerMockHelper
|
174
214
|
before(:each) do
|
175
|
-
|
176
|
-
@downloader = Oddb2xml::
|
215
|
+
setup_migel_server_mock
|
216
|
+
@downloader = Oddb2xml::MigelDownloader.new
|
177
217
|
end
|
178
218
|
it_behaves_like 'any downloader'
|
179
219
|
context 'when download is called' do
|
180
|
-
let(:
|
181
|
-
it 'should read
|
182
|
-
|
183
|
-
|
220
|
+
let(:bin) { @downloader.download }
|
221
|
+
it 'should read xls as Binary-String' do
|
222
|
+
bin.should be_a String
|
223
|
+
bin.bytes.should_not nil
|
184
224
|
end
|
185
225
|
it 'should clean up current directory' do
|
186
|
-
|
187
|
-
File.exist?('
|
226
|
+
bin.should_not raise_error(Timeout::Error)
|
227
|
+
File.exist?('oddb2xml_files_nonpharma.txt').should be(false)
|
188
228
|
end
|
189
229
|
end
|
190
230
|
end
|
data/spec/spec_helper.rb
CHANGED
@@ -22,7 +22,9 @@ module ServerMockHelper
|
|
22
22
|
setup_swissmedic_server_mock
|
23
23
|
setup_swissmedic_info_server_mock
|
24
24
|
setup_epha_server_mock
|
25
|
-
|
25
|
+
setup_bm_update_server_mock
|
26
|
+
setup_lppv_server_mock
|
27
|
+
setup_migel_server_mock
|
26
28
|
end
|
27
29
|
def setup_bag_xml_server_mock
|
28
30
|
# zip
|
@@ -154,20 +156,48 @@ module ServerMockHelper
|
|
154
156
|
:headers => {'Content-Type' => 'text/csv; charset=utf-8'},
|
155
157
|
:body => stub_response)
|
156
158
|
end
|
157
|
-
def
|
159
|
+
def setup_bm_update_server_mock
|
158
160
|
# txt
|
159
|
-
stub_txt_url = '
|
160
|
-
stub_response = File.read(File.expand_path('../data/
|
161
|
+
stub_txt_url = 'https://raw.github.com/zdavatz/oddb2xml_files/master/BM_Update.txt'
|
162
|
+
stub_response = File.read(File.expand_path('../data/oddb2xml_files_bm_update.txt', __FILE__))
|
161
163
|
stub_request(:get, stub_txt_url).
|
162
164
|
with(:headers => {
|
163
165
|
'Accept' => '*/*',
|
164
|
-
'Host' => '
|
166
|
+
'Host' => 'raw.github.com',
|
165
167
|
}).
|
166
168
|
to_return(
|
167
169
|
:status => 200,
|
168
170
|
:headers => {'Content-Type' => 'text/plain; charset=utf-8'},
|
169
171
|
:body => stub_response)
|
170
172
|
end
|
173
|
+
def setup_lppv_server_mock
|
174
|
+
# txt
|
175
|
+
stub_txt_url = 'https://raw.github.com/zdavatz/oddb2xml_files/master/LPPV.txt'
|
176
|
+
stub_response = File.read(File.expand_path('../data/oddb2xml_files_lppv.txt', __FILE__))
|
177
|
+
stub_request(:get, stub_txt_url).
|
178
|
+
with(:headers => {
|
179
|
+
'Accept' => '*/*',
|
180
|
+
'Host' => 'raw.github.com',
|
181
|
+
}).
|
182
|
+
to_return(
|
183
|
+
:status => 200,
|
184
|
+
:headers => {'Content-Type' => 'text/plain; charset=utf-8'},
|
185
|
+
:body => stub_response)
|
186
|
+
end
|
187
|
+
def setup_migel_server_mock
|
188
|
+
# xls
|
189
|
+
stub_xls_url = 'https://github.com/zdavatz/oddb2xml_files/raw/master/NON-Pharma.xls'
|
190
|
+
stub_response = File.read(File.expand_path('../data/oddb2xml_files_nonpharma.xls', __FILE__))
|
191
|
+
stub_request(:get, stub_xls_url).
|
192
|
+
with(:headers => {
|
193
|
+
'Accept' => '*/*',
|
194
|
+
'Host' => 'github.com',
|
195
|
+
}).
|
196
|
+
to_return(
|
197
|
+
:status => 200,
|
198
|
+
:headers => {'Content-Type' => 'application/octet-stream; charset=utf-8'},
|
199
|
+
:body => stub_response)
|
200
|
+
end
|
171
201
|
end
|
172
202
|
|
173
203
|
RSpec.configure do |config|
|
metadata
CHANGED
@@ -1,7 +1,7 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: oddb2xml
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
version: 1.2.
|
4
|
+
version: 1.2.9
|
5
5
|
prerelease:
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
@@ -9,11 +9,11 @@ authors:
|
|
9
9
|
autorequire:
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
|
-
date: 2013-01
|
12
|
+
date: 2013-02-01 00:00:00.000000000 Z
|
13
13
|
dependencies:
|
14
14
|
- !ruby/object:Gem::Dependency
|
15
15
|
name: rubyzip
|
16
|
-
requirement: &
|
16
|
+
requirement: &10903560 !ruby/object:Gem::Requirement
|
17
17
|
none: false
|
18
18
|
requirements:
|
19
19
|
- - ! '>='
|
@@ -21,10 +21,10 @@ dependencies:
|
|
21
21
|
version: '0'
|
22
22
|
type: :runtime
|
23
23
|
prerelease: false
|
24
|
-
version_requirements: *
|
24
|
+
version_requirements: *10903560
|
25
25
|
- !ruby/object:Gem::Dependency
|
26
26
|
name: archive-tar-minitar
|
27
|
-
requirement: &
|
27
|
+
requirement: &10902760 !ruby/object:Gem::Requirement
|
28
28
|
none: false
|
29
29
|
requirements:
|
30
30
|
- - ! '>='
|
@@ -32,10 +32,10 @@ dependencies:
|
|
32
32
|
version: '0'
|
33
33
|
type: :runtime
|
34
34
|
prerelease: false
|
35
|
-
version_requirements: *
|
35
|
+
version_requirements: *10902760
|
36
36
|
- !ruby/object:Gem::Dependency
|
37
37
|
name: mechanize
|
38
|
-
requirement: &
|
38
|
+
requirement: &10901880 !ruby/object:Gem::Requirement
|
39
39
|
none: false
|
40
40
|
requirements:
|
41
41
|
- - ! '>='
|
@@ -43,10 +43,10 @@ dependencies:
|
|
43
43
|
version: '0'
|
44
44
|
type: :runtime
|
45
45
|
prerelease: false
|
46
|
-
version_requirements: *
|
46
|
+
version_requirements: *10901880
|
47
47
|
- !ruby/object:Gem::Dependency
|
48
48
|
name: nokogiri
|
49
|
-
requirement: &
|
49
|
+
requirement: &10900980 !ruby/object:Gem::Requirement
|
50
50
|
none: false
|
51
51
|
requirements:
|
52
52
|
- - ! '>='
|
@@ -54,10 +54,10 @@ dependencies:
|
|
54
54
|
version: '0'
|
55
55
|
type: :runtime
|
56
56
|
prerelease: false
|
57
|
-
version_requirements: *
|
57
|
+
version_requirements: *10900980
|
58
58
|
- !ruby/object:Gem::Dependency
|
59
59
|
name: savon
|
60
|
-
requirement: &
|
60
|
+
requirement: &10900160 !ruby/object:Gem::Requirement
|
61
61
|
none: false
|
62
62
|
requirements:
|
63
63
|
- - ! '>='
|
@@ -65,10 +65,10 @@ dependencies:
|
|
65
65
|
version: '2.0'
|
66
66
|
type: :runtime
|
67
67
|
prerelease: false
|
68
|
-
version_requirements: *
|
68
|
+
version_requirements: *10900160
|
69
69
|
- !ruby/object:Gem::Dependency
|
70
70
|
name: spreadsheet
|
71
|
-
requirement: &
|
71
|
+
requirement: &10899260 !ruby/object:Gem::Requirement
|
72
72
|
none: false
|
73
73
|
requirements:
|
74
74
|
- - ! '>='
|
@@ -76,10 +76,10 @@ dependencies:
|
|
76
76
|
version: '0'
|
77
77
|
type: :runtime
|
78
78
|
prerelease: false
|
79
|
-
version_requirements: *
|
79
|
+
version_requirements: *10899260
|
80
80
|
- !ruby/object:Gem::Dependency
|
81
81
|
name: rspec
|
82
|
-
requirement: &
|
82
|
+
requirement: &10898260 !ruby/object:Gem::Requirement
|
83
83
|
none: false
|
84
84
|
requirements:
|
85
85
|
- - ! '>='
|
@@ -87,10 +87,10 @@ dependencies:
|
|
87
87
|
version: '0'
|
88
88
|
type: :development
|
89
89
|
prerelease: false
|
90
|
-
version_requirements: *
|
90
|
+
version_requirements: *10898260
|
91
91
|
- !ruby/object:Gem::Dependency
|
92
92
|
name: webmock
|
93
|
-
requirement: &
|
93
|
+
requirement: &10896980 !ruby/object:Gem::Requirement
|
94
94
|
none: false
|
95
95
|
requirements:
|
96
96
|
- - ! '>='
|
@@ -98,10 +98,10 @@ dependencies:
|
|
98
98
|
version: '0'
|
99
99
|
type: :development
|
100
100
|
prerelease: false
|
101
|
-
version_requirements: *
|
101
|
+
version_requirements: *10896980
|
102
102
|
- !ruby/object:Gem::Dependency
|
103
103
|
name: ZenTest
|
104
|
-
requirement: &
|
104
|
+
requirement: &10895520 !ruby/object:Gem::Requirement
|
105
105
|
none: false
|
106
106
|
requirements:
|
107
107
|
- - ! '>='
|
@@ -109,10 +109,10 @@ dependencies:
|
|
109
109
|
version: '0'
|
110
110
|
type: :development
|
111
111
|
prerelease: false
|
112
|
-
version_requirements: *
|
112
|
+
version_requirements: *10895520
|
113
113
|
- !ruby/object:Gem::Dependency
|
114
114
|
name: hoe
|
115
|
-
requirement: &
|
115
|
+
requirement: &10894700 !ruby/object:Gem::Requirement
|
116
116
|
none: false
|
117
117
|
requirements:
|
118
118
|
- - ! '>='
|
@@ -120,10 +120,10 @@ dependencies:
|
|
120
120
|
version: '3.4'
|
121
121
|
type: :development
|
122
122
|
prerelease: false
|
123
|
-
version_requirements: *
|
123
|
+
version_requirements: *10894700
|
124
124
|
- !ruby/object:Gem::Dependency
|
125
125
|
name: rdoc
|
126
|
-
requirement: &
|
126
|
+
requirement: &10893480 !ruby/object:Gem::Requirement
|
127
127
|
none: false
|
128
128
|
requirements:
|
129
129
|
- - ! '>='
|
@@ -131,10 +131,10 @@ dependencies:
|
|
131
131
|
version: '0'
|
132
132
|
type: :development
|
133
133
|
prerelease: false
|
134
|
-
version_requirements: *
|
134
|
+
version_requirements: *10893480
|
135
135
|
- !ruby/object:Gem::Dependency
|
136
136
|
name: rdoc
|
137
|
-
requirement: &
|
137
|
+
requirement: &10892260 !ruby/object:Gem::Requirement
|
138
138
|
none: false
|
139
139
|
requirements:
|
140
140
|
- - ~>
|
@@ -142,10 +142,10 @@ dependencies:
|
|
142
142
|
version: '3.10'
|
143
143
|
type: :development
|
144
144
|
prerelease: false
|
145
|
-
version_requirements: *
|
145
|
+
version_requirements: *10892260
|
146
146
|
- !ruby/object:Gem::Dependency
|
147
147
|
name: hoe
|
148
|
-
requirement: &
|
148
|
+
requirement: &10891580 !ruby/object:Gem::Requirement
|
149
149
|
none: false
|
150
150
|
requirements:
|
151
151
|
- - ~>
|
@@ -153,7 +153,7 @@ dependencies:
|
|
153
153
|
version: '2.13'
|
154
154
|
type: :development
|
155
155
|
prerelease: false
|
156
|
-
version_requirements: *
|
156
|
+
version_requirements: *10891580
|
157
157
|
description: oddb2xml creates xml files using swissINDEX, BAG-XML and Swissmedic.
|
158
158
|
email: yasaka@ywesee.com, zdavatz@ywesee.com
|
159
159
|
executables:
|
@@ -184,12 +184,15 @@ files:
|
|
184
184
|
- spec/compressor_spec.rb
|
185
185
|
- spec/data/XMLPublications.zip
|
186
186
|
- spec/data/epha_interactions.csv
|
187
|
+
- spec/data/oddb2xml_files_bm_update.txt
|
188
|
+
- spec/data/oddb2xml_files_lppv.txt
|
187
189
|
- spec/data/oddb_article.xml
|
188
190
|
- spec/data/oddb_fi.xml
|
189
191
|
- spec/data/oddb_fi_product.xml
|
190
192
|
- spec/data/oddb_limitation.xml
|
191
193
|
- spec/data/oddb_product.xml
|
192
194
|
- spec/data/oddb_substance.xml
|
195
|
+
- spec/data/oddb2xml_files_nonpharma.xls
|
193
196
|
- spec/data/swissindex.xml
|
194
197
|
- spec/data/swissindex_nonpharma.xml
|
195
198
|
- spec/data/swissindex_pharma.xml
|
@@ -203,7 +206,6 @@ files:
|
|
203
206
|
- spec/data/wsdl.xml
|
204
207
|
- spec/data/wsdl_nonpharma.xml
|
205
208
|
- spec/data/wsdl_pharma.xml
|
206
|
-
- spec/data/ywesee_bm_update.txt
|
207
209
|
- spec/downloader_spec.rb
|
208
210
|
- spec/extractor_spec.rb
|
209
211
|
- spec/spec_helper.rb
|