numo-tiny_linalg 0.0.1

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data/.husky/commit-msg

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+#!/usr/bin/env sh
+. "$(dirname -- "$0")/_/husky.sh"
+
+yarn commitlint --edit "$1"

data/.rubocop.yml

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+require:
+  - rubocop-rake
+  - rubocop-minitest
+  - rubocop-performance
+
+AllCops:
+  TargetRubyVersion: 2.7
+  NewCops: enable
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data/CHANGELOG.md

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+## [Unreleased]
+
+## [0.0.1] - 2023-07-14
+
+- Initial release

data/CODE_OF_CONDUCT.md

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+# Contributor Covenant Code of Conduct
+
+## Our Pledge
+
+We as members, contributors, and leaders pledge to make participation in our community a harassment-free experience for everyone, regardless of age, body size, visible or invisible disability, ethnicity, sex characteristics, gender identity and expression, level of experience, education, socio-economic status, nationality, personal appearance, race, religion, or sexual identity and orientation.
+
+We pledge to act and interact in ways that contribute to an open, welcoming, diverse, inclusive, and healthy community.
+
+## Our Standards
+
+Examples of behavior that contributes to a positive environment for our community include:
+
+* Demonstrating empathy and kindness toward other people
+* Being respectful of differing opinions, viewpoints, and experiences
+* Giving and gracefully accepting constructive feedback
+* Accepting responsibility and apologizing to those affected by our mistakes, and learning from the experience
+* Focusing on what is best not just for us as individuals, but for the overall community
+
+Examples of unacceptable behavior include:
+
+* The use of sexualized language or imagery, and sexual attention or
+  advances of any kind
+* Trolling, insulting or derogatory comments, and personal or political attacks
+* Public or private harassment
+* Publishing others' private information, such as a physical or email
+  address, without their explicit permission
+* Other conduct which could reasonably be considered inappropriate in a
+  professional setting
+
+## Enforcement Responsibilities
+
+Community leaders are responsible for clarifying and enforcing our standards of acceptable behavior and will take appropriate and fair corrective action in response to any behavior that they deem inappropriate, threatening, offensive, or harmful.
+
+Community leaders have the right and responsibility to remove, edit, or reject comments, commits, code, wiki edits, issues, and other contributions that are not aligned to this Code of Conduct, and will communicate reasons for moderation decisions when appropriate.
+
+## Scope
+
+This Code of Conduct applies within all community spaces, and also applies when an individual is officially representing the community in public spaces. Examples of representing our community include using an official e-mail address, posting via an official social media account, or acting as an appointed representative at an online or offline event.
+
+## Enforcement
+
+Instances of abusive, harassing, or otherwise unacceptable behavior may be reported to the community leaders responsible for enforcement at yoshoku@outlook.com. All complaints will be reviewed and investigated promptly and fairly.
+
+All community leaders are obligated to respect the privacy and security of the reporter of any incident.
+
+## Enforcement Guidelines
+
+Community leaders will follow these Community Impact Guidelines in determining the consequences for any action they deem in violation of this Code of Conduct:
+
+### 1. Correction
+
+**Community Impact**: Use of inappropriate language or other behavior deemed unprofessional or unwelcome in the community.
+
+**Consequence**: A private, written warning from community leaders, providing clarity around the nature of the violation and an explanation of why the behavior was inappropriate. A public apology may be requested.
+
+### 2. Warning
+
+**Community Impact**: A violation through a single incident or series of actions.
+
+**Consequence**: A warning with consequences for continued behavior. No interaction with the people involved, including unsolicited interaction with those enforcing the Code of Conduct, for a specified period of time. This includes avoiding interactions in community spaces as well as external channels like social media. Violating these terms may lead to a temporary or permanent ban.
+
+### 3. Temporary Ban
+
+**Community Impact**: A serious violation of community standards, including sustained inappropriate behavior.
+
+**Consequence**: A temporary ban from any sort of interaction or public communication with the community for a specified period of time. No public or private interaction with the people involved, including unsolicited interaction with those enforcing the Code of Conduct, is allowed during this period. Violating these terms may lead to a permanent ban.
+
+### 4. Permanent Ban
+
+**Community Impact**: Demonstrating a pattern of violation of community standards, including sustained inappropriate behavior,  harassment of an individual, or aggression toward or disparagement of classes of individuals.
+
+**Consequence**: A permanent ban from any sort of public interaction within the community.
+
+## Attribution
+
+This Code of Conduct is adapted from the [Contributor Covenant][homepage], version 2.0,
+available at https://www.contributor-covenant.org/version/2/0/code_of_conduct.html.
+
+Community Impact Guidelines were inspired by [Mozilla's code of conduct enforcement ladder](https://github.com/mozilla/diversity).
+
+[homepage]: https://www.contributor-covenant.org
+
+For answers to common questions about this code of conduct, see the FAQ at
+https://www.contributor-covenant.org/faq. Translations are available at https://www.contributor-covenant.org/translations.

data/Gemfile

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+# frozen_string_literal: true
+
+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in tiny_linalg.gemspec
+gemspec
+
+gem 'minitest', '~> 5.0'
+gem 'rake', '~> 13.0'
+gem 'rake-compiler'
+gem 'rubocop', '~> 1.21'
+gem 'rubocop-minitest', '~> 0.30.0'
+gem 'rubocop-performance', '~> 1.17'
+gem 'rubocop-rake', '~> 0.6.0'
+gem 'yard', github: '/yoshoku/yard', branch: 'jquery-3.6.0'

data/LICENSE.txt

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+Copyright (c) 2023 Atsushi Tatsuma
+All rights reserved.
+
+Redistribution and use in source and binary forms, with or without
+modification, are permitted provided that the following conditions are met:
+
+* Redistributions of source code must retain the above copyright notice, this
+  list of conditions and the following disclaimer.
+
+* Redistributions in binary form must reproduce the above copyright notice,
+  this list of conditions and the following disclaimer in the documentation
+  and/or other materials provided with the distribution.
+
+* Neither the name of the copyright holder nor the names of its
+  contributors may be used to endorse or promote products derived from
+  this software without specific prior written permission.
+
+THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
+AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE
+IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
+DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
+FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
+DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
+SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER
+CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY,
+OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
+OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

data/README.md

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+# Numo::TinyLinalg
+
+[![Build Status](https://github.com/yoshoku/numo-tiny_linalg/actions/workflows/main.yml/badge.svg)](https://github.com/yoshoku/numo-tiny_linalg/actions/workflows/main.yml)
+[![BSD 3-Clause License](https://img.shields.io/badge/License-BSD%203--Clause-orange.svg)](https://github.com/yoshoku/numo-tiny_linalg/blob/main/LICENSE.txt)
+
+Numo::TinyLinalg is a subset library from Numo::Linalg consisting only of methods used in Machine Learning algorithms.
+
+This gem is still **under development** and may undergo many changes in the future.
+
+## Installation
+
+Install the OpenBlas.
+
+macOS:
+
+```sh
+$ brew install openblas
+```
+
+Ubuntu:
+
+```sh
+$ sudo apt-get install libopenblas-dev liblapacke-dev
+```
+
+Install the gem and add to the application's Gemfile by executing.
+
+macOS:
+
+```sh
+$ bundle config --local build.numo-tiny_linalg "--with-opt-dir=/opt/homebrew/Cellar/openblas/0.3.23/"
+$ bundle add numo-tiny_linalg
+```
+
+Ubuntu:
+
+```sh
+$ bundle add numo-tiny_linalg
+```
+
+If bundler is not being used to manage dependencies, install the gem by executing.
+
+macOS:
+
+```sh
+$ gem install numo-tiny_linalg -- --with-opt-dir=/opt/homebrew/Cellar/openblas/0.3.23/
+```
+
+Ubuntu:
+
+```sh
+$ gem install numo-tiny_linalg
+```
+
+## Usage
+
+An example of singular value decomposition.
+
+```ruby
+require 'numo/tiny_linalg'
+
+Numo::Linalg = Numo::TinyLinalg unless defined?(Numo::Linalg)
+
+x = Numo::DFloat.new(5, 2).rand.dot(Numo::DFloat.new(2, 3).rand)
+# =>
+# Numo::DFloat#shape=[5,3]
+# [[0.104945, 0.0284236, 0.117406],
+#  [0.862634, 0.210945, 0.922135],
+#  [0.324507, 0.0752655, 0.339158],
+#  [0.67085, 0.102594, 0.600882],
+#  [0.404631, 0.116868, 0.46644]]
+
+s, u, vt = Numo::Linalg.svd(x, job: 'S')
+
+z = u.dot(s.diag).dot(vt)
+# =>
+# Numo::DFloat#shape=[5,3]
+# [[0.104945, 0.0284236, 0.117406],
+#  [0.862634, 0.210945, 0.922135],
+#  [0.324507, 0.0752655, 0.339158],
+#  [0.67085, 0.102594, 0.600882],
+#  [0.404631, 0.116868, 0.46644]]
+
+puts (x - z).abs.max
+# => 4.440892098500626e-16
+```
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/yoshoku/numo-tiny_linalg.
+This project is intended to be a safe, welcoming space for collaboration, and contributors are expected to adhere to the [code of conduct](https://github.com/yoshoku/numo-tiny_linalg/blob/main/CODE_OF_CONDUCT.md).
+
+## Code of Conduct
+
+Everyone interacting in the Numo::TinyLinalg project's codebases, issue trackers, chat rooms and mailing lists is expected to follow the [code of conduct](https://github.com/yoshoku/numo-tiny_linalg/blob/main/CODE_OF_CONDUCT.md).
+
+## License
+
+The gem is available as open source under the terms of the [BSD-3-Clause License](https://opensource.org/licenses/BSD-3-Clause).

data/Rakefile

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+# frozen_string_literal: true
+
+require 'bundler/gem_tasks'
+require 'rake/testtask'
+
+Rake::TestTask.new(:test) do |t|
+  t.libs << 'test'
+  t.libs << 'lib'
+  t.test_files = FileList['test/**/test_*.rb']
+end
+
+require 'rubocop/rake_task'
+
+RuboCop::RakeTask.new
+
+require 'rake/extensiontask'
+
+task build: :compile # rubocop:disable Rake/Desc
+
+desc 'Run clang-format'
+task :'clang-format' do
+  sh 'clang-format -style=file -Werror --dry-run ext/numo/tiny_linalg/*.cpp ext/numo/tiny_linalg/*.hpp'
+end
+
+Rake::ExtensionTask.new('tiny_linalg') do |ext|
+  ext.ext_dir = 'ext/numo/tiny_linalg'
+  ext.lib_dir = 'lib/numo/tiny_linalg'
+end
+
+task default: %i[clobber compile test rubocop]

data/commitlint.config.js

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+module.exports = { extends: ['@commitlint/config-conventional'] };

data/ext/numo/tiny_linalg/converter.hpp

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+namespace TinyLinalg {
+struct DConverter {
+  double to_dtype(VALUE val) {
+    return NUM2DBL(val);
+  }
+
+  double one() {
+    return 1.0;
+  }
+
+  double zero() {
+    return 0.0;
+  }
+};
+
+struct SConverter {
+  float to_dtype(VALUE val) {
+    return static_cast<float>(NUM2DBL(val));
+  }
+
+  float one() {
+    return 1.0f;
+  }
+
+  float zero() {
+    return 0.0f;
+  }
+};
+
+struct ZConverter {
+  dcomplex to_dtype(VALUE val) {
+    dcomplex z;
+    REAL(z) = NUM2DBL(rb_funcall(val, rb_intern("real"), 0));
+    IMAG(z) = NUM2DBL(rb_funcall(val, rb_intern("imag"), 0));
+    return z;
+  }
+
+  dcomplex one() {
+    dcomplex z;
+    REAL(z) = 1.0;
+    IMAG(z) = 0.0;
+    return z;
+  }
+
+  dcomplex zero() {
+    dcomplex z;
+    REAL(z) = 0.0;
+    IMAG(z) = 0.0;
+    return z;
+  }
+};
+
+struct CConverter {
+  scomplex to_dtype(VALUE val) {
+    scomplex z;
+    REAL(z) = NUM2DBL(rb_funcall(val, rb_intern("real"), 0));
+    IMAG(z) = NUM2DBL(rb_funcall(val, rb_intern("imag"), 0));
+    return z;
+  }
+
+  scomplex one() {
+    scomplex z;
+    REAL(z) = 1.0f;
+    IMAG(z) = 0.0f;
+    return z;
+  }
+
+  scomplex zero() {
+    scomplex z;
+    REAL(z) = 0.0f;
+    IMAG(z) = 0.0f;
+    return z;
+  }
+};
+} // namespace TinyLinalg

data/ext/numo/tiny_linalg/dot.hpp

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+namespace TinyLinalg {
+
+struct DDot {
+  double call(const int n, const double* x, const int incx, const double* y, const int incy) {
+    return cblas_ddot(n, x, incx, y, incy);
+  }
+};
+
+struct SDot {
+  float call(const int n, const float* x, const int incx, const float* y, const int incy) {
+    return cblas_sdot(n, x, incx, y, incy);
+  }
+};
+
+template <int nary_dtype_id, typename dtype, class BlasFn>
+class Dot {
+public:
+  static void define_module_function(VALUE mBlas, const char* modfn_name) {
+    rb_define_module_function(mBlas, modfn_name, RUBY_METHOD_FUNC(tiny_linalg_dot), 2);
+  };
+
+private:
+  static void iter_dot(na_loop_t* const lp) {
+    dtype* x = (dtype*)NDL_PTR(lp, 0);
+    dtype* y = (dtype*)NDL_PTR(lp, 1);
+    dtype* d = (dtype*)NDL_PTR(lp, 2);
+    const size_t n = NDL_SHAPE(lp, 0)[0];
+    dtype ret = BlasFn().call(n, x, 1, y, 1);
+    *d = ret;
+  };
+
+  static VALUE tiny_linalg_dot(VALUE self, VALUE x, VALUE y) {
+    VALUE nary_dtype = NaryTypes[nary_dtype_id];
+
+    if (CLASS_OF(x) != nary_dtype) {
+      x = rb_funcall(nary_dtype, rb_intern("cast"), 1, x);
+    }
+    if (!RTEST(nary_check_contiguous(x))) {
+      x = nary_dup(x);
+    }
+    if (CLASS_OF(y) != nary_dtype) {
+      y = rb_funcall(nary_dtype, rb_intern("cast"), 1, y);
+    }
+    if (!RTEST(nary_check_contiguous(y))) {
+      y = nary_dup(y);
+    }
+
+    narray_t* x_nary = NULL;
+    GetNArray(x, x_nary);
+    narray_t* y_nary = NULL;
+    GetNArray(y, y_nary);
+
+    if (NA_NDIM(x_nary) != 1) {
+      rb_raise(rb_eArgError, "x must be 1-dimensional");
+      return Qnil;
+    }
+    if (NA_NDIM(y_nary) != 1) {
+      rb_raise(rb_eArgError, "y must be 1-dimensional");
+      return Qnil;
+    }
+    if (NA_SIZE(x_nary) == 0) {
+      rb_raise(rb_eArgError, "x must not be empty");
+      return Qnil;
+    }
+    if (NA_SIZE(y_nary) == 0) {
+      rb_raise(rb_eArgError, "x must not be empty");
+      return Qnil;
+    }
+    if (NA_SIZE(x_nary) != NA_SIZE(y_nary)) {
+      rb_raise(rb_eArgError, "x and y must have same size");
+      return Qnil;
+    }
+
+    ndfunc_arg_in_t ain[2] = { { nary_dtype, 1 }, { nary_dtype, 1 } };
+    size_t shape_out[1] = { 1 };
+    ndfunc_arg_out_t aout[1] = { { nary_dtype, 0, shape_out } };
+    ndfunc_t ndf = { iter_dot, NO_LOOP | NDF_EXTRACT, 2, 1, ain, aout };
+    VALUE ret = na_ndloop(&ndf, 2, x, y);
+
+    RB_GC_GUARD(x);
+    RB_GC_GUARD(y);
+    return ret;
+  };
+};
+
+} // namespace TinyLinalg