nugen_barcode_splitter 0.0.15 → 0.0.16

data/bin/nugen_barcode_splitter

@@ -5,7 +5,7 @@ require "nugen_barcode_splitter"
 require "fileutils"
 
 usage =<<EOF
-      V E R S I O N - 0 . 0 . 14 - BETA
+      V E R S I O N - 0 . 0 . 16 - BETA
       #{$0} [options] -p project_dir -o out_dir -c sample_sheet_nugen
 _____________________________________________________________________________
 
@@ -168,7 +168,7 @@ Dir.glob(options[:project_dir]+"/*").each do |p|
       stats_handler.write(statistics.to_s)
       stats_handler.close()
     end
-    next unless f =~ /_updated/
+    next unless f =~ /.updated/
     name = f.split("/")[-1]
     id = name.split(".")[1]
     sample_dir = outdir + "/Sample_#{id}"
@@ -177,8 +177,8 @@ Dir.glob(options[:project_dir]+"/*").each do |p|
     rescue Exception => e
       STDERR.puts e.message
     end
-    name = name.gsub(/_updated/, "")
-    cmd = `mv #{f} #{sample_dir}/name`
+    name = name.gsub(/.updated/, "")
+    cmd = "mv #{f} #{sample_dir}/#{name}"
     if options[:debug]
       STDERR.puts cmd if options[:debug]
     else

data/lib/nugen_barcode_splitter/merger.rb

@@ -149,9 +149,9 @@ class Merger
     end
     stats = ""
     @sample_ids.each_with_index do |id,i|
-      stats += id +"/t" + statistics[i].to_s + "/n"
+      stats += id +"\t" + statistics[i].to_s + "\n"
     end
-    stats += "unmatched/t" + statistics[-2].to_s + "/n"
-    stats += "total/t" + statistics[-1].to_s + "/n"
+    stats += "unmatched\t" + statistics[-2].to_s + "\n"
+    stats += "total\t" + statistics[-1].to_s + "\n"
   end
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: nugen_barcode_splitter
 version: !ruby/object:Gem::Version
-  version: 0.0.15
+  version: 0.0.16
   prerelease: 
 platform: ruby
 authors:
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2012-02-15 00:00:00.000000000Z
+date: 2012-02-22 00:00:00.000000000Z
 dependencies: []
 description: ! "This gem is designed to demultiplex reads\n                     produced
   by Illumina with Nugen\n                     (http://www.nugeninc.com/nugen/) barcodes."