name-spotter 0.0.3 → 0.0.4

data/README.rdoc

@@ -58,6 +58,6 @@ To run tests start TaxonFinder and NetiNeti on your local machine with default c
 
 Authors: Chuck Ha, Anthony Goddard,  Dmitry Mozzherin
 
-Copyright (c) 2012 Marine Biologica Laboratory. See LICENSE.txt for
+Copyright (c) 2012 Marine Biological Laboratory. See LICENSE.txt for
 further details.
 

data/VERSION

@@ -1 +1 @@
-0.0.3
+0.0.4

data/lib/name-spotter/scientific_name.rb

@@ -10,7 +10,7 @@ class NameSpotter
       @verbatim = verbatim_name
       if options[:start_position]
         @start_pos = options[:start_position]
-        @end_pos = @start_pos + @verbatim.length
+        @end_pos = @start_pos + @verbatim.length - 1
       end
       @score = options[:score] if options[:score]
       @scientific = options[:scientific_name] if options[:scientific_name]

data/name-spotter.gemspec

@@ -5,7 +5,7 @@
 
 Gem::Specification.new do |s|
   s.name = "name-spotter"
-  s.version = "0.0.3"
+  s.version = "0.0.4"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Anthony Goddard", "Chuck Ha", "Dmitry Mozzherin"]

data/spec/name-spotter_spec.rb

@@ -1,3 +1,4 @@
+# encoding: utf-8
 require File.expand_path(File.dirname(__FILE__) + '/spec_helper')
 
 describe "NameSpotter" do
@@ -45,4 +46,14 @@ describe "NameSpotter" do
     res.should == ["Betula alba", "Mus musculus", "B[etula] alba", "Varanus"]
   end
 
+  it "should get back correct names using offsets in utf-8 based text" do
+    text = "A text with multibyte characters नेति नेति:  Some text that has Betula\n alba and Mus musculus and \neven B. alba and even M. mus-\nculus. Also it has name unknown before: Varanus bitatawa species"
+    res = @neti.find(text)[:names]
+    res.map do |name|
+      verbatim = name[:verbatim]
+      found_name = text[name[:offsetStart]..name[:offsetEnd]]
+      found_name.should == verbatim
+    end
+  end
+
 end

data/spec/scientific_name_spec.rb

@@ -10,7 +10,7 @@ describe NameSpotter::ScientificName do
     end
     
     it "should have figured out the end position" do
-      @name.end_pos.should eq @name.start_pos + @find_me.length
+      @name.end_pos.should eq @name.start_pos + @find_me.length - 1
     end
   end
   
@@ -19,7 +19,7 @@ describe NameSpotter::ScientificName do
       verbatim = "Slovenščina"
       name = NameSpotter::ScientificName.new(verbatim, {:start_position => 48193})
       name.verbatim.should eq verbatim
-      name.end_pos.should eq name.start_pos + verbatim.length
+      name.end_pos.should eq name.start_pos + verbatim.length - 1
     end
   end
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: name-spotter
 version: !ruby/object:Gem::Version
-  version: 0.0.3
+  version: 0.0.4
   prerelease: 
 platform: ruby
 authors:
@@ -15,7 +15,7 @@ date: 2012-01-12 00:00:00.000000000Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rake
-  requirement: &70131407564320 !ruby/object:Gem::Requirement
+  requirement: &70177838647540 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -23,10 +23,10 @@ dependencies:
         version: '0'
   type: :runtime
   prerelease: false
-  version_requirements: *70131407564320
+  version_requirements: *70177838647540
 - !ruby/object:Gem::Dependency
   name: rest-client
-  requirement: &70131407562420 !ruby/object:Gem::Requirement
+  requirement: &70177838646400 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -34,10 +34,10 @@ dependencies:
         version: '0'
   type: :runtime
   prerelease: false
-  version_requirements: *70131407562420
+  version_requirements: *70177838646400
 - !ruby/object:Gem::Dependency
   name: builder
-  requirement: &70131407561440 !ruby/object:Gem::Requirement
+  requirement: &70177838644980 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -45,10 +45,10 @@ dependencies:
         version: '0'
   type: :runtime
   prerelease: false
-  version_requirements: *70131407561440
+  version_requirements: *70177838644980
 - !ruby/object:Gem::Dependency
   name: json
-  requirement: &70131407560480 !ruby/object:Gem::Requirement
+  requirement: &70177838632900 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -56,10 +56,10 @@ dependencies:
         version: '0'
   type: :runtime
   prerelease: false
-  version_requirements: *70131407560480
+  version_requirements: *70177838632900
 - !ruby/object:Gem::Dependency
   name: rspec
-  requirement: &70131407559220 !ruby/object:Gem::Requirement
+  requirement: &70177838632000 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -67,10 +67,10 @@ dependencies:
         version: 2.3.0
   type: :development
   prerelease: false
-  version_requirements: *70131407559220
+  version_requirements: *70177838632000
 - !ruby/object:Gem::Dependency
   name: cucumber
-  requirement: &70131407558420 !ruby/object:Gem::Requirement
+  requirement: &70177838630660 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -78,10 +78,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70131407558420
+  version_requirements: *70177838630660
 - !ruby/object:Gem::Dependency
   name: capybara
-  requirement: &70131407557480 !ruby/object:Gem::Requirement
+  requirement: &70177838629900 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -89,10 +89,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70131407557480
+  version_requirements: *70177838629900
 - !ruby/object:Gem::Dependency
   name: bundler
-  requirement: &70131407556400 !ruby/object:Gem::Requirement
+  requirement: &70177838629120 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -100,10 +100,10 @@ dependencies:
         version: 1.0.0
   type: :development
   prerelease: false
-  version_requirements: *70131407556400
+  version_requirements: *70177838629120
 - !ruby/object:Gem::Dependency
   name: jeweler
-  requirement: &70131407555260 !ruby/object:Gem::Requirement
+  requirement: &70177838628420 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -111,10 +111,10 @@ dependencies:
         version: 1.6.4
   type: :development
   prerelease: false
-  version_requirements: *70131407555260
+  version_requirements: *70177838628420
 - !ruby/object:Gem::Dependency
   name: rcov
-  requirement: &70131407554000 !ruby/object:Gem::Requirement
+  requirement: &70177838627820 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -122,10 +122,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70131407554000
+  version_requirements: *70177838627820
 - !ruby/object:Gem::Dependency
   name: ruby-debug19
-  requirement: &70131407552800 !ruby/object:Gem::Requirement
+  requirement: &70177838612920 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -133,7 +133,7 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *70131407552800
+  version_requirements: *70177838612920
 description: The gem searches for scientific names in texts using socket servers running
   TaxonFinder (by Patrick Leary) and NetiNeti (by Lakshmi Manohar Akella)
 email: dmozzherin@gmail.com
@@ -180,7 +180,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: 947943124713619845
+      hash: -3919114826077496743
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements: