mspire 0.10.7.3 → 0.10.8.0

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 8df274039d16839cbdf35f56f1e7ecf32ca47bac
-  data.tar.gz: b5c1d079ff977beca71a96b6ae104eabca0c0d09
+  metadata.gz: 72807eb6132aa38fc1277fb7ca3be77d48b8fbf7
+  data.tar.gz: 3661728260192eb6a782d553c3294366bb9fca1d
 SHA512:
-  metadata.gz: 8441a8f5be0b660115d2da8e8c1b738cfecdc3f03aa2611032cf7c346288c25028e47802bc04566d4adb39abd09bbebabd6a37cdc81cd83ef91d7bc28ffd295a
-  data.tar.gz: d9f25609b05e3629d04db3b4906f2323cf1988bb1aa42034f8ba7d2c8f2dba167670d0b9a0b435b15920cd8e91192acdf6668d3379ae41e1c6e1a3fb94ac0341
+  metadata.gz: 65900c051fdba40996f0b8b2366b9e4f47444207c26982ae23c8d58c17e689d79984ff8a7443299932b33a1770f5fa013c4fbe804260cc5114c66190338131af
+  data.tar.gz: 811e9abc828e5dc2f38d423a460c3b262ba6d87b462c9aeb6c910de463529a78bda44944f93eccb4ed1cdcdfd1764631f68c08cc24d9bdf0b86aa471adda1164

data/lib/mspire/mzml/spectrum.rb

@@ -181,8 +181,8 @@ module Mspire
       # array.
       def self.from_arrays(id, arrays)
         spec = self.new(id)
-        arrays.zip(['MS:1000514','MS:1000515']).each do |ar, acc|
-          dar = DataArray.new(ar).describe!(acc)
+        spec.data_arrays = arrays.zip(['MS:1000514','MS:1000515']).map do |ar, acc|
+          DataArray.new(ar).describe!(acc)
         end
         spec
       end

data/lib/mspire/peaklist.rb

@@ -360,11 +360,7 @@ module Mspire
 
     # returns an Mspire::Spectrum object
     def to_spectrum
-      xs = [] ; ys = []
-      each do |peak|
-        xs << peak.x ; ys << peak.y
-      end
-      Mspire::Spectrum.new([xs, ys])
+      Mspire::Spectrum.new(self.transpose)
     end
   end
 end

data/lib/mspire/version.rb

@@ -1,3 +1,3 @@
 module Mspire
-  VERSION = "0.10.7.3"
+  VERSION = "0.10.8.0"
 end

data/mspire.gemspec

@@ -31,10 +31,10 @@ Gem::Specification.new do |spec|
   end
 
   [
-    ["bundler", "~> 1.5.1"],
+    ["bundler", "~> 1.6.2"],
     ["rake"],
     ["rspec", "~> 2.14.1"], 
-    ["rdoc", "~> 4.1.0"], 
+    ["rdoc", "~> 4.1.1"], 
     ["simplecov", "~> 0.8.2"],
     ["coveralls"],
     # here because bad microsoft OS support

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: mspire
 version: !ruby/object:Gem::Version
-  version: 0.10.7.3
+  version: 0.10.8.0
 platform: ruby
 authors:
 - John T. Prince
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2014-05-12 00:00:00.000000000 Z
+date: 2014-05-28 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: nokogiri
@@ -115,14 +115,14 @@ dependencies:
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: 1.5.1
+        version: 1.6.2
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: 1.5.1
+        version: 1.6.2
 - !ruby/object:Gem::Dependency
   name: rake
   requirement: !ruby/object:Gem::Requirement
@@ -157,14 +157,14 @@ dependencies:
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: 4.1.0
+        version: 4.1.1
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - "~>"
       - !ruby/object:Gem::Version
-        version: 4.1.0
+        version: 4.1.1
 - !ruby/object:Gem::Dependency
   name: simplecov
   requirement: !ruby/object:Gem::Requirement