msf 0.1.2 → 0.1.3

data/README.md

@@ -20,13 +20,15 @@ operating my version of Thermo's Proteome Discoverer (1.3).
 
     gem install msf
 
-## Usage ##
+## API Usage ##
 
     msf = MSF.new({:path => msf_file})
     Peptides.all do |peptide|
       <whatever>
     end
 
+## CLI Usage ##
+
     ibspectra msf_file >> msf_file/msf_file.ibspectra.csv
 
 ## Note ##
@@ -36,16 +38,27 @@ See erd/erd.png for an Entity Relationship Diagram of the MSF schema.
 ## Contributing to msf ##
  
 * Checkout
+
 `git clone git@github.com:bioteam/msf.git; cd msf`
+
 * Fix bugs, add features
+
 `<make changes>`
+
 * Test
+
 `rspec`
+
 * Update version
+
 `rake version:bump:patch`
+
 * Commit changes
+
 `git commit`
+
 * Release
+
 `rake release`
 		
 ## Copyright ##

data/Rakefile

@@ -17,8 +17,8 @@ Jeweler::Tasks.new do |gem|
   gem.name = "msf"
   gem.homepage = "https://github.com/bioteam/msf"
   gem.license = "MIT"
-  gem.summary = "Thermo MSF file parser using ActiveRecord as ORM."
-  gem.description = "An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing the its data. Much has been taken from Angel Pizarro's thermo_msf."
+  gem.summary = "An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing the its data. Much has been taken from Angel Pizarro's thermo_msf."
+  gem.description = "Thermo MSF file parser using ActiveRecord as ORM."
   gem.email = "bill@bioteam.net"
   gem.authors = ["William Van Etten"]
   gem.files.include 'bin/ibspectra'

data/VERSION

@@ -1 +1 @@
-0.1.2
+0.1.3

data/msf.gemspec

@@ -5,12 +5,12 @@
 
 Gem::Specification.new do |s|
   s.name = "msf"
-  s.version = "0.1.2"
+  s.version = "0.1.3"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["William Van Etten"]
   s.date = "2012-11-08"
-  s.description = "An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing the its data. Much has been taken from Angel Pizarro's thermo_msf."
+  s.description = "Thermo MSF file parser using ActiveRecord as ORM."
   s.email = "bill@bioteam.net"
   s.executables = ["ibspectra"]
   s.extra_rdoc_files = [
@@ -102,7 +102,7 @@ Gem::Specification.new do |s|
   s.licenses = ["MIT"]
   s.require_paths = ["lib"]
   s.rubygems_version = "1.8.24"
-  s.summary = "Thermo MSF file parser using ActiveRecord as ORM."
+  s.summary = "An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing the its data. Much has been taken from Angel Pizarro's thermo_msf."
 
   if s.respond_to? :specification_version then
     s.specification_version = 3

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: msf
 version: !ruby/object:Gem::Version
-  version: 0.1.2
+  version: 0.1.3
   prerelease: 
 platform: ruby
 authors:
@@ -155,8 +155,7 @@ dependencies:
     - - ~>
       - !ruby/object:Gem::Version
         version: 2.2.2
-description: An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing
-  the its data. Much has been taken from Angel Pizarro's thermo_msf.
+description: Thermo MSF file parser using ActiveRecord as ORM.
 email: bill@bioteam.net
 executables:
 - ibspectra
@@ -259,7 +258,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: 2406878685784829180
+      hash: -2476262534008812957
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements:
@@ -271,5 +270,6 @@ rubyforge_project:
 rubygems_version: 1.8.24
 signing_key: 
 specification_version: 3
-summary: Thermo MSF file parser using ActiveRecord as ORM.
+summary: An MSF file is sqlite3 dtabase. ActiveRecord is a great ORM for accessing
+  the its data. Much has been taken from Angel Pizarro's thermo_msf.
 test_files: []