mmac 0.0.1

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+ *.gem
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+ *.rbc
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+ .bundle
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+ .config
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+ .yardoc
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+ Gemfile.lock
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+ InstalledFiles
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+ _yardoc
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+ coverage
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+ doc/
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+ lib/bundler/man
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+ pkg
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+ rdoc
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+ spec/reports
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+ test/tmp
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+ test/version_tmp
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+ test/file
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+ tmp
data/Gemfile ADDED
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+ source 'https://rubygems.org'
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+
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+ gem 'pry'
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+ gem 'ruby-progressbar'
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+ # Specify your gem's dependencies in mmac.gemspec
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+ gemspec
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+ Copyright (c) 2013 Thanh Nguyen
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+
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+ MIT License
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+
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+ Permission is hereby granted, free of charge, to any person obtaining
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+ a copy of this software and associated documentation files (the
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+ "Software"), to deal in the Software without restriction, including
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+ without limitation the rights to use, copy, modify, merge, publish,
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+ distribute, sublicense, and/or sell copies of the Software, and to
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+ permit persons to whom the Software is furnished to do so, subject to
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+ the following conditions:
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+
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+ The above copyright notice and this permission notice shall be
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+ included in all copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
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+ EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
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+ MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
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+ NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS BE
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+ LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN ACTION
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+ OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION
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+ WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE.
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+ # Mmac
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+
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+ TODO: Write a gem description
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+
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+ ## Installation
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+
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+ Add this line to your application's Gemfile:
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+
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+ gem 'mmac'
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+
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+ And then execute:
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+
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+ $ bundle
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+
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+ Or install it yourself as:
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+
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+ $ gem install mmac
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+
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+ ## Usage
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+
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+ TODO: Write usage instructions here
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+
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+ ## Contributing
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+
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+ 1. Fork it
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+ 2. Create your feature branch (`git checkout -b my-new-feature`)
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+ 3. Commit your changes (`git commit -am 'Add some feature'`)
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+ 4. Push to the branch (`git push origin my-new-feature`)
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+ 5. Create new Pull Request
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+ require "bundler/gem_tasks"
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+ require "mmac/version"
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+ require "mmac/framework"
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+
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+ module Mmac
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+
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+ end
File without changes
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+ require File.dirname( __FILE__ ) + "/rule"
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+ require 'ruby-progressbar'
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+ module Mmac
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+ #
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+ # Main Manager for MMac (contains all options, rules, ...)
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+ #
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+ #
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+ class Framework
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+ #
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+ # @return Array of data
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+ #
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+ attr_accessor :data
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+ #
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+ # @return number of data column except Label
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+ #
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+ attr_accessor :attrCount
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+ #
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+ # @return minSupp
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+ #
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+ attr_accessor :minSupp
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+ #
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+ # @return minConf
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+ #
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+ attr_accessor :minConf
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+ #
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+ # @return Array of Filter rules
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+ #
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+ attr_accessor :filters
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+ #
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+ # @return Array of Filter rules
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+ #
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+ attr_accessor :filtersPrint
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+
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+ def initialize inputFile, minSupp, minConf
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+ @inputFile = inputFile
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+ @data = []
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+ @rules = []
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+ @filters = []
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+ @filtersPrint = []
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+ @minSupp = minSupp
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+ @minConf = minConf
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+ @level = 0
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+
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+ puts ("MIN_SUPP: #{minSupp} - MIN_CONF: #{minConf}")
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+ puts 'Input from file...'
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+ parse_data(inputFile)
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+ @attrCount = @data.first.conditions.count
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+ puts ("Number of data: " + "#{@data.count}")
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+ puts ("Number of attr: " + "#{@attrCount}")
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+ end
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+
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+ def run
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+ puts 'Learning...'
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+ self.normalize
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+ puts ("Total rules: " + "#{@filters.count}")
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+ puts 'Done!'
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+ # Write to Filter file
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+ filtersPrint = @filters.map{|p| p.clone}
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+ filtersPrint.each do |filter|
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+ hash = Hash[filter.conditions]
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+ filter.conditions = (0..(@attrCount-1)).map{|index| hash[index] || ""}
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+ end
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+ File.open(File.dirname(@inputFile) + '/filter.txt', 'w') {|f| f.write(filtersPrint.map{|p| p.conditions.join(",") + "," + p.labels}.join("\n"))}
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+ end
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+
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+ def parse_data inputFile
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+ line_array = File.readlines(inputFile)
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+ line_array.each do |line|
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+ *conditions, label = line.strip.split(',')
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+ @data << Rule.new(Array[(0...conditions.size).zip conditions].flatten(1), label)
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+ end
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+ end
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+
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+ def normalize
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+ # Apriori
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+ filterSet = []
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+ blackList = []
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+ dataCount = @data.count
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+ @level = @level + 1
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+ puts ("Level " + "#{@level}")
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+
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+ 1.upto(attrCount).flat_map do |n|
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+ rules = []
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+ filterCount = filterSet.count
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+ @data.each do |data|
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+ conditions = data.conditions
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+ label = data.labels
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+
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+ # All combinations with n attrs
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+ combinations = conditions.combination(n)
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+
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+ bList = blackList.map {|b| b.conditions if b.labels == label}.compact
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+ rules += combinations.select{|c| !c.contain_any_in?(bList)}.map{|c| Rule.new(c, label)} # Remove all combinations that in blacklist
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+ sleep 0.001
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+ end
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+
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+ # collect conditions without dup
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+ conRules = rules.map{|r| r.conditions}.uniq
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+ # break if have 0 rules
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+ break if conRules.count == 0
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+
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+ # Log using progressbar
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+ progressbar = ProgressBar.create(:title => "N = #{n}", :starting_at => 0, :total => conRules.count, :length => 100)
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+
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+ conRules.each do |c|
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+ # increase
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+ progressbar.increment
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+
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+ arr = rules.select{|r| r.conditions == c}
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+ actOccr = data.count{|d| (c - d.conditions).empty?}
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+
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+ set = arr.map{|a| a.labels}.uniq
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+ set.each do |s|
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+ suppCount = arr.count{|a| a.labels == s}
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+ # Calculate sup and conf
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+ supp = suppCount.fdiv(dataCount)
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+ conf = suppCount.fdiv(actOccr)
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+
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+ if supp >= minSupp && conf >= minConf
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+ filterSet << Rule.new(c, s, supp, conf, actOccr)
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+ elsif supp < minSupp
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+ blackList << Rule.new(c, s)
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+ end
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+ end
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+
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+ sleep 0.03
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+ end
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+ # break if all new combinations is < minSupp and minConf
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+ break if filterSet.count == filterCount
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+ sleep 0.05
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+ end
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+
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+ originalOrder = filterSet.clone
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+ filterSet = filterSet.sort_by{|s| [-s.conf, -s.supp, -s.actOccr, s.conditions.count, originalOrder.index(s)]}
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+ @filters += filterSet
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+ filterSet.each do |filter|
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+ # Remove data that contain filter create T'
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+ @data -= @data.select{|data| data.labels == filter.labels && (filter.conditions - data.conditions).empty?}
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+ end
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+
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+ # Log Number of rule in level
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+ puts ("Number of rules: " + "#{filterSet.count}")
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+ # recursive until Data empty
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+ if !@data.empty? && !filterSet.empty?
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+ self.normalize
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+ end
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+
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+ end
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+
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+ def set_label sample_file
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+ test = []
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+ line_array = File.readlines(sample_file)
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+ line_array.each do |line|
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+ conditions = line.strip.split(',')
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+ rule = Rule.new(Array[(0...conditions.size).zip conditions].flatten(1), "")
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+ # set label for test data
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+ @filters.each do |filter|
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+ if (filter.conditions - rule.conditions).empty?
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+ rule.labels = filter.labels
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+ break
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+ end
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+ end
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+ test << rule
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+ end
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+ File.open(File.dirname(sample_file) + '/testOut.txt', 'w') {|f| f.write(test.map{|p| p.conditions.map{|c| c[1]}.join(",") + "," + p.labels}.join("\n"))}
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+ end
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+
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+ end
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+ end
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+
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+ class Array
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+ def contain_any_in?(arrayOfOther)
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+ arrayOfOther.each do |p|
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+ if (p - self).empty?
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+ return true
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+ end
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+ end
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+ return false
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+ end
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+ end
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+ module Mmac
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+ #
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+ # Main Data/Rule for MMac (in here is mushroom, ...)
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+ #
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+ #
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+ class Rule
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+ #
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+ # @return Array of conditions
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+ #
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+ attr_accessor :conditions
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+ #
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+ # @return array of labels: result of these conditions
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+ #
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+ attr_accessor :labels
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+ #
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+ # @return Supp of rule
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+ #
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+ attr_accessor :supp
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+ #
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+ # @return Conf of rule
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+ #
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+ attr_accessor :conf
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+ #
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+ # @return actOccr
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+ #
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+ attr_accessor :actOccr
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+
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+ def initialize (conditions, labels, *option)
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+ @conditions = conditions
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+ @labels = labels
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+ if !option.empty?
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+ @supp = option[0]
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+ @conf = option[1]
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+ @actOccr = option[2]
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+ end
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+ end
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+
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+ def ==(other)
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+ self.conditions == other.conditions && self.labels == other.labels
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+ end
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+
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+ def isParent?(other)
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+ (self.conditions - other.conditions).empty? && self.labels == other.labels
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+ end
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+
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+ end
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+ end
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+ module Mmac
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+ VERSION = "0.0.1"
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+ end
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+ # -*- encoding: utf-8 -*-
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+ lib = File.expand_path('../lib', __FILE__)
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+ $LOAD_PATH.unshift(lib) unless $LOAD_PATH.include?(lib)
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+ require 'mmac/version'
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+
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+ Gem::Specification.new do |gem|
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+ gem.name = "mmac"
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+ gem.version = Mmac::VERSION
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+ gem.authors = ["Thanh Nguyen"]
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+ gem.email = ["congthanh991@gmail.com"]
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+ gem.description = ["MMAC Project"]
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+ gem.summary = ["MMAC Library"]
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+ gem.homepage = ""
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+
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+ gem.files = `git ls-files`.split($/)
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+ gem.executables = gem.files.grep(%r{^bin/}).map{ |f| File.basename(f) }
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+ gem.test_files = gem.files.grep(%r{^(test|spec|features)/})
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+ gem.require_paths = ["lib"]
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+ gem.add_dependency 'pry'
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+ gem.add_dependency 'ruby-progressbar'
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+ end
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+ #!/usr/bin/env ruby
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+ # encoding: utf-8
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+
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+ require_relative '../lib/mmac'
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+
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+ puts 'Run program...'
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+ MIN_SUPP = 0.2
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+ MIN_CONF = 0.4
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+ framework = Mmac::Framework.new(File.dirname( __FILE__ ) + '/file/data.txt', MIN_SUPP, MIN_CONF)
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+ framework.run
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+
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+ puts 'Run Data Test'
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+ framework.set_label(File.dirname( __FILE__ ) + '/file/test.txt')
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+
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+ f1 = IO.readlines(File.dirname( __FILE__ ) + "/file/testOut.txt").map(&:chomp)
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+ f2 = IO.readlines(File.dirname( __FILE__ ) + "/file/data.txt" ).map(&:chomp)
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+
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+ diff = f1 - f2
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+ puts ("Number of diff: #{diff.count}")
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+ puts ("Percent of success test: #{((1 - diff.count.fdiv(f1.count))*100).round(2)}%")
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+
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+ File.open(File.dirname( __FILE__ ) + "/file/diff.txt","w"){ |f| f.write(diff.join("\n")) }
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+
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+ puts 'Done!'
metadata ADDED
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+ --- !ruby/object:Gem::Specification
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+ name: mmac
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+ version: !ruby/object:Gem::Version
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+ version: 0.0.1
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+ prerelease:
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+ platform: ruby
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+ authors:
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+ - Thanh Nguyen
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+ autorequire:
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+ bindir: bin
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+ cert_chain: []
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+ date: 2013-11-15 00:00:00.000000000 Z
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+ dependencies:
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+ - !ruby/object:Gem::Dependency
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+ name: pry
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+ requirement: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ - !ruby/object:Gem::Dependency
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+ name: ruby-progressbar
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+ requirement: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ type: :runtime
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+ prerelease: false
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+ version_requirements: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ description: ! '["MMAC Project"]'
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+ email:
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+ - congthanh991@gmail.com
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+ executables: []
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+ extensions: []
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+ extra_rdoc_files: []
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+ files:
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+ - .gitignore
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+ - Gemfile
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+ - LICENSE.txt
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+ - README.md
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+ - Rakefile
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+ - lib/mmac.rb
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+ - lib/mmac/cache/filter.txt
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+ - lib/mmac/framework.rb
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+ - lib/mmac/rule.rb
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+ - lib/mmac/version.rb
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+ - mmac.gemspec
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+ - test/file/data.txt
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+ - test/file/diff.txt
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+ - test/file/domain.txt
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+ - test/file/filter.txt
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+ - test/file/test.txt
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+ - test/file/testOut.txt
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+ - test/test.rb
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+ homepage: ''
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+ licenses: []
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+ post_install_message:
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+ rdoc_options: []
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+ require_paths:
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+ - lib
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+ required_ruby_version: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ required_rubygems_version: !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ! '>='
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+ - !ruby/object:Gem::Version
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+ version: '0'
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+ requirements: []
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+ rubyforge_project:
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+ rubygems_version: 1.8.24
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+ signing_key:
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+ specification_version: 3
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+ summary: ! '["MMAC Library"]'
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+ test_files:
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+ - test/file/data.txt
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+ - test/file/diff.txt
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+ - test/file/domain.txt
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+ - test/file/filter.txt
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+ - test/file/test.txt
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+ - test/file/testOut.txt
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+ - test/test.rb
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+ has_rdoc: