metanorma 1.2.8 → 1.3.0

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checksums.yaml CHANGED
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@@ -168,6 +168,7 @@ module Metanorma
168
168
  return unless Array(@directives).include? "documents-inline"
169
169
 
170
170
  documents.each_with_index do |(_, d), i|
171
+ next if d.attachment
171
172
  id = format("doc%<index>09d", index: i)
172
173
  builder.send("doc-container", id: id) { |b| d.to_xml b }
173
174
  end
@@ -0,0 +1,213 @@
1
+ module Metanorma
2
+ # XML collection renderer
3
+ class CollectionRenderer
4
+ # map locality type and label (e.g. "clause" "1") to id = anchor for
5
+ # a document
6
+ # Note: will only key clauses, which have unambiguous reference label in
7
+ # locality. Notes, examples etc with containers are just plunked against
8
+ # UUIDs, so that their IDs can at least be registered to be tracked
9
+ # as existing.
10
+ def read_anchors(xml)
11
+ ret = {}
12
+ xrefs = @isodoc.xref_init(@lang, @script, @isodoc, @isodoc.i18n, {})
13
+ xrefs.parse xml
14
+ xrefs.get.each do |k, v|
15
+ ret[v[:type]] ||= {}
16
+ index = v[:container] || v[:label].nil? || v[:label].empty? ?
17
+ UUIDTools::UUID.random_create.to_s : v[:label]
18
+ ret[v[:type]][index] = k
19
+ end
20
+ ret
21
+ end
22
+
23
+ # @param id [String]
24
+ # @param read [Boolean]
25
+ # @return [Array<String, nil>]
26
+ def xml_file(id, read)
27
+ file = @xml.at(ns("//doc-container[@id = '#{id}']")).to_xml if read
28
+ filename = "#{id}.html"
29
+ [file, filename]
30
+ end
31
+
32
+ # @param bib [Nokogiri::XML::Element]
33
+ # @param identifier [String]
34
+ def update_bibitem(bib, identifier) # rubocop:disable Metrics/AbcSize, Metrics/MethodLength
35
+ docid = bib&.at(ns("./docidentifier"))&.text
36
+ unless @files[docid]
37
+ error = "[metanorma] Cannot find crossreference to document #{docid} "\
38
+ "in document #{identifier}."
39
+ @log.add("Cross-References", nil, error)
40
+ Util.log(error, :warning)
41
+ return
42
+ end
43
+ id = bib["id"]
44
+ newbib = bib.replace(@files[docid][:bibdata])
45
+ newbib.name = "bibitem"
46
+ newbib["id"] = id
47
+ newbib["hidden"] = "true"
48
+ newbib&.at(ns("./ext"))&.remove
49
+ _file, url = targetfile(@files[docid], false, !@files[docid][:attachment])
50
+ uri_node = Nokogiri::XML::Node.new "uri", newbib
51
+ uri_node[:type] = "citation"
52
+ uri_node.content = url
53
+ newbib.at(ns("./docidentifier")).previous = uri_node
54
+ end
55
+
56
+ # Resolves direct links to other files in collection
57
+ # (repo(current-metanorma-collection/x),
58
+ # and indirect links to other files in collection
59
+ # (bibitem[@type = 'internal'] pointing to a file anchor
60
+ # in another file in the collection)
61
+ # @param file [String] XML content
62
+ # @param identifier [String] docid
63
+ # @param internal_refs [Hash{String=>Hash{String=>String}] schema name to anchor to filename
64
+ # @return [String] XML content
65
+ def update_xrefs(file, identifier, internal_refs)
66
+ docxml = Nokogiri::XML(file)
67
+ update_indirect_refs_to_docs(docxml, internal_refs)
68
+ add_document_suffix(identifier, docxml)
69
+ update_direct_refs_to_docs(docxml, identifier)
70
+ svgmap_resolve(datauri_encode(docxml))
71
+ docxml.xpath(ns("//references[not(./bibitem[not(@hidden) or @hidden = 'false'])]")).each do |f|
72
+ f["hidden"] = "true"
73
+ end
74
+ docxml.to_xml
75
+ end
76
+
77
+ def datauri_encode(docxml)
78
+ docxml.xpath(ns("//image")).each do |i|
79
+ i["src"] = Metanorma::Utils::datauri(i["src"])
80
+ end
81
+ docxml
82
+ end
83
+
84
+ def svgmap_resolve(docxml)
85
+ isodoc = IsoDoc::Convert.new({})
86
+ docxml.xpath(ns("//svgmap//eref")).each do |e|
87
+ href = isodoc.eref_target(e)
88
+ next if href == "##{e['bibitemid']}"
89
+
90
+ if href.match(/^#/)
91
+ next unless docxml.at("//*[@id = '#{href.sub(/^#/, '')}']")
92
+ end
93
+ e["target"] = href.strip
94
+ e.name = "link"
95
+ e&.elements&.remove
96
+ end
97
+ Metanorma::Utils::svgmap_rewrite(docxml, "")
98
+ end
99
+
100
+ # repo(current-metanorma-collection/ISO 17301-1:2016)
101
+ # replaced by bibdata of "ISO 17301-1:2016" in situ as bibitem.
102
+ # Any erefs to that bibitem id are replaced with relative URL
103
+ # Preferably with anchor, and is a job to realise dynamic lookup
104
+ # of localities.
105
+ def update_direct_refs_to_docs(docxml, identifier)
106
+ docxml.xpath(ns("//bibitem[not(ancestor::bibitem)]")).each do |b|
107
+ docid = b&.at(ns("./docidentifier[@type = 'repository']"))&.text
108
+ next unless docid && %r{^current-metanorma-collection/}.match(docid)
109
+ update_bibitem(b, identifier)
110
+ update_anchors(b, docxml, docid)
111
+ end
112
+ end
113
+
114
+ # Resolve erefs to a container of ids in another doc,
115
+ # to an anchor eref (direct link)
116
+ def update_indirect_refs_to_docs(docxml, internal_refs)
117
+ internal_refs.each do |schema, ids|
118
+ ids.each do |id, file|
119
+ update_indirect_refs_to_docs1(docxml, schema, id, file)
120
+ end
121
+ end
122
+ end
123
+
124
+ def update_indirect_refs_to_docs1(docxml, schema, id, file)
125
+ docxml.xpath(ns("//eref[@bibitemid = '#{schema}_#{id}']")).each do |e|
126
+ e["citeas"] = file
127
+ end
128
+ docid = docxml.at(ns("//bibitem[@id = '#{schema}_#{id}']/"\
129
+ "docidentifier[@type = 'repository']")) or return
130
+ docid.children = "current-metanorma-collection/#{file}"
131
+ docid.previous = "<docidentifier type='X'>#{file}</docidentifier>"
132
+ end
133
+
134
+ # update crossrefences to other documents, to include disambiguating document suffix on id
135
+ def update_anchors(bib, docxml, _id) # rubocop:disable Metrics/MethodLength, Metrics/AbcSize
136
+ docid = bib&.at(ns("./docidentifier"))&.text
137
+ docxml.xpath("//xmlns:eref[@citeas = '#{docid}']").each do |e|
138
+ if @files[docid]
139
+ update_anchor_loc(bib, e, docid)
140
+ else
141
+ e << "<strong>** Unresolved reference to document #{docid}, id #{e['bibitemid']}</strong>"
142
+ end
143
+ end
144
+ end
145
+
146
+ def update_anchor_loc(bib, e, docid)
147
+ loc = e.at(ns(".//locality[@type = 'anchor']")) or
148
+ return update_anchor_create_loc(bib, e, docid)
149
+ document_suffix = Metanorma::Utils::to_ncname(docid)
150
+ ref = loc.at(ns("./referenceFrom")) || return
151
+ anchor = "#{ref.text}_#{document_suffix}"
152
+ return unless @files[docid][:anchors].inject([]) do |m, (_, x)|
153
+ m+= x.values
154
+ end.include?(anchor)
155
+ ref.content = anchor
156
+ end
157
+
158
+ # if there is a crossref to another document, with no anchor, retrieve the
159
+ # anchor given the locality, and insert it into the crossref
160
+ def update_anchor_create_loc(bib, e, docid)
161
+ ins = e.at(ns("./localityStack")) || return
162
+ type = ins&.at(ns("./locality/@type"))&.text
163
+ ref = ins&.at(ns("./locality/referenceFrom"))&.text
164
+ (anchor = @files[docid][:anchors][type][ref]) || return
165
+ ref_from = Nokogiri::XML::Node.new "referenceFrom", bib
166
+ ref_from.content = anchor.sub(/^_/, "")
167
+ locality = Nokogiri::XML::Node.new "locality", bib
168
+ locality[:type] = "anchor"
169
+ locality.add_child ref_from
170
+ ins << locality
171
+ end
172
+
173
+ # gather internal bibitem references
174
+ def gather_internal_refs
175
+ @files.each_with_object({}) do |(_, x), refs|
176
+ next if x[:attachment]
177
+ file, _ = targetfile(x, true)
178
+ Nokogiri::XML(file)
179
+ .xpath(ns("//bibitem[@type = 'internal']/"\
180
+ "docidentifier[@type = 'repository']")).each do |d|
181
+ a = d.text.split(%r{/}, 2)
182
+ a.size > 1 or next
183
+ refs[a[0]] ||= {}
184
+ refs[a[0]][a[1]] = true
185
+ end
186
+ end
187
+ end
188
+
189
+ # resolve file location for the target of each internal reference
190
+ def locate_internal_refs
191
+ refs = gather_internal_refs
192
+ @files.each do |identifier, x|
193
+ next if x[:attachment]
194
+
195
+ file, _filename = targetfile(x, true)
196
+ docxml = Nokogiri::XML(file)
197
+ refs.each do |schema, ids|
198
+ ids.each_key do |id|
199
+ n = docxml.at("//*[@id = '#{id}']") and
200
+ n.at("./ancestor-or-self::*[@type = '#{schema}']") and
201
+ refs[schema][id] = identifier
202
+ end
203
+ end
204
+ end
205
+ refs.each do |schema, ids|
206
+ ids.each do |id, key|
207
+ key == true and refs[schema][id] = "Missing:#{schema}:#{id}"
208
+ end
209
+ end
210
+ refs
211
+ end
212
+ end
213
+ end
@@ -2,6 +2,7 @@
2
2
 
3
3
  require "isodoc"
4
4
  require "metanorma-utils"
5
+ require_relative "collection_fileparse"
5
6
 
6
7
  module Metanorma
7
8
  # XML collection renderer
@@ -15,11 +16,9 @@ module Metanorma
15
16
  files = {}
16
17
  @xml.xpath(ns("//docref")).each do |d|
17
18
  identifier = d.at(ns("./identifier")).text
18
- files[identifier] = if d["fileref"]
19
- { type: "fileref",
20
- ref: File.join(path, d["fileref"]) }
21
- else { type: "id", ref: d["id"] }
22
- end
19
+ files[identifier] = file_entry(d, path)
20
+ next if files[identifier][:attachment]
21
+
23
22
  file, _filename = targetfile(files[identifier], true)
24
23
  xml = Nokogiri::XML(file)
25
24
  add_document_suffix(identifier, xml)
@@ -29,6 +28,17 @@ module Metanorma
29
28
  files
30
29
  end
31
30
 
31
+ def file_entry(docref, path)
32
+ ret = if docref["fileref"]
33
+ { type: "fileref", ref: File.join(path, docref["fileref"]),
34
+ rel_path: docref["fileref"] }
35
+ else
36
+ { type: "id", ref: docref["id"] }
37
+ end
38
+ ret[:attachment] = docref["attachment"] if docref["attachment"]
39
+ ret
40
+ end
41
+
32
42
  def add_suffix_to_attributes(doc, suffix, tag_name, attribute_name)
33
43
  doc.xpath(ns("//#{tag_name}[@#{attribute_name}]")).each do |elem|
34
44
  elem.attributes[attribute_name].value =
@@ -38,199 +48,42 @@ module Metanorma
38
48
 
39
49
  def add_document_suffix(identifier, doc)
40
50
  document_suffix = Metanorma::Utils::to_ncname(identifier)
41
- [%w[* id],
42
- %w[* bibitemid],
43
- %w[review from],
44
- %w[review to],
45
- %w[index to],
46
- %w[xref target],
47
- %w[callout target]]
48
- .each do |(tag_name, attribute_name)|
51
+ [%w[* id], %w[* bibitemid], %w[review from],
52
+ %w[review to], %w[index to], %w[xref target],
53
+ %w[callout target]]
54
+ .each do |(tag_name, attribute_name)|
49
55
  add_suffix_to_attributes(doc, document_suffix, tag_name, attribute_name)
50
56
  end
51
57
  end
52
58
 
53
- # map locality type and label (e.g. "clause" "1") to id = anchor for
54
- # a document
55
- def read_anchors(xml)
56
- ret = {}
57
- xrefs = @isodoc.xref_init(@lang, @script, @isodoc, @isodoc.i18n, {})
58
- xrefs.parse xml
59
- xrefs.get.each do |k, v|
60
- ret[v[:type]] ||= {}
61
- index = v[:container] || v[:label].nil? || v[:label].empty? ?
62
- UUIDTools::UUID.random_create.to_s : v[:label]
63
- # Note: will only key clauses, which have unambiguous reference label in locality.
64
- # Notes, examples etc with containers are just plunked agaisnt UUIDs, so that their
65
- # IDs can at least be registered to be tracked as existing.
66
- ret[v[:type]][index] = k
67
- end
68
- ret
69
- end
70
-
71
59
  # return file contents + output filename for each file in the collection,
72
60
  # given a docref entry
73
61
  # @param data [Hash]
74
62
  # @param read [Boolean]
75
63
  # @return [Array<String, nil>]
76
- def targetfile(data, read = false)
77
- if data[:type] == "fileref" then ref_file data[:ref], read
64
+ def targetfile(data, read = false, doc = true)
65
+ if data[:type] == "fileref" then ref_file data[:ref], read, doc
78
66
  else xml_file data[:id], read
79
67
  end
80
68
  end
81
69
 
82
70
  # @param ref [String]
83
71
  # @param read [Boolean]
72
+ # @param doc [Boolean]
84
73
  # @return [Array<String, nil>]
85
- def ref_file(ref, read)
74
+ def ref_file(ref, read, doc)
86
75
  file = File.read(ref, encoding: "utf-8") if read
87
- filename = ref.sub(/\.xml$/, ".html")
76
+ filename = ref.dup
77
+ filename.sub!(/\.xml$/, ".html") if doc
88
78
  [file, filename]
89
79
  end
90
80
 
91
- # @param id [String]
92
- # @param read [Boolean]
93
- # @return [Array<String, nil>]
94
- def xml_file(id, read)
95
- file = @xml.at(ns("//doc-container[@id = '#{id}']")).to_xml if read
96
- filename = id + ".html"
97
- [file, filename]
98
- end
99
-
100
- # @param bib [Nokogiri::XML::Element]
101
- # @param identifier [String]
102
- def update_bibitem(bib, identifier) # rubocop:disable Metrics/AbcSize, Metrics/MethodLength
103
- docid = bib&.at(ns("./docidentifier"))&.text
104
- unless @files[docid]
105
- error = "[metanorma] Cannot find crossreference to document #{docid} in document #{identifier}."
106
- @log.add("Cross-References", nil, error)
107
- Util.log(error, :warning)
108
- return
109
- end
110
- id = bib["id"]
111
- newbib = bib.replace(@files[docid][:bibdata])
112
- newbib.name = "bibitem"
113
- newbib["id"] = id
114
- newbib["hidden"] = "true"
115
- newbib&.at(ns("./ext"))&.remove
116
- _file, url = targetfile(@files[docid], false)
117
- uri_node = Nokogiri::XML::Node.new "uri", newbib
118
- uri_node[:type] = "citation"
119
- uri_node.content = url
120
- newbib.at(ns("./docidentifier")).previous = uri_node
121
- end
122
-
123
- # Resolves direct links to other files in collection (repo(current-metanorma-collection/x),
124
- # and indirect links to other files in collection (bibitem[@type = 'internal'] pointing to a file anchor
125
- # in another file in the collection)
126
- # @param file [String] XML content
127
- # @param identifier [String] docid
128
- # @param internal_refs [Hash{String=>Hash{String=>String}] schema name to anchor to filename
129
- # @return [String] XML content
130
- def update_xrefs(file, identifier, internal_refs)
131
- docxml = Nokogiri::XML(file)
132
- update_indirect_refs_to_docs(docxml, internal_refs)
133
- add_document_suffix(identifier, docxml)
134
- update_direct_refs_to_docs(docxml, identifier)
135
- svgmap_resolve(datauri_encode(docxml))
136
- docxml.xpath(ns("//references[not(./bibitem[not(@hidden) or @hidden = 'false'])]")).each do |f|
137
- f["hidden"] = "true"
138
- end
139
- docxml.to_xml
140
- end
141
-
142
- def datauri_encode(docxml)
143
- docxml.xpath(ns("//image")).each { |i| i["src"] = Metanorma::Utils::datauri(i["src"]) }
144
- docxml
145
- end
146
-
147
- def svgmap_resolve(docxml)
148
- isodoc = IsoDoc::Convert.new({})
149
- docxml.xpath(ns("//svgmap//eref")).each do |e|
150
- href = isodoc.eref_target(e)
151
- next if href == "#" + e["bibitemid"]
152
- if href.match(/^#/)
153
- next unless docxml.at("//*[@id = '#{href.sub(/^#/, '')}']")
154
- end
155
- e["target"] = href.strip
156
- e.name = "link"
157
- e&.elements&.remove
158
- end
159
- Metanorma::Utils::svgmap_rewrite(docxml, "")
160
- end
161
-
162
- # repo(current-metanorma-collection/ISO 17301-1:2016)
163
- # replaced by bibdata of "ISO 17301-1:2016" in situ as bibitem.
164
- # Any erefs to that bibitem id are replaced with relative URL
165
- # Preferably with anchor, and is a job to realise dynamic lookup of localities.
166
- def update_direct_refs_to_docs(docxml, identifier)
167
- docxml.xpath(ns("//bibitem[not(ancestor::bibitem)]")).each do |b|
168
- docid = b&.at(ns("./docidentifier[@type = 'repository']"))&.text
169
- next unless docid && %r{^current-metanorma-collection/}.match(docid)
170
- update_bibitem(b, identifier)
171
- update_anchors(b, docxml, docid)
172
- end
173
- end
174
-
175
- # Resolve erefs to a container of ids in another doc, to an anchor eref (direct link)
176
- def update_indirect_refs_to_docs(docxml, internal_refs)
177
- internal_refs.each do |schema, ids|
178
- ids.each do |id, file|
179
- update_indirect_refs_to_docs1(docxml, schema, id, file)
180
- end
181
- end
182
- end
183
-
184
- def update_indirect_refs_to_docs1(docxml, schema, id, file)
185
- docxml.xpath(ns("//eref[@bibitemid = '#{schema}_#{id}']")).each do |e|
186
- e["citeas"] = file
187
- end
188
- docid = docxml.at(ns("//bibitem[@id = '#{schema}_#{id}']/docidentifier[@type = 'repository']")) or return
189
- docid.children = "current-metanorma-collection/#{file}"
190
- docid.previous = "<docidentifier type='X'>#{file}</docidentifier>"
191
- end
192
-
193
- # update crossrefences to other documents, to include disambiguating document suffix on id
194
- def update_anchors(bib, docxml, _id) # rubocop:disable Metrics/MethodLength, Metrics/AbcSize
195
- docid = bib&.at(ns("./docidentifier"))&.text
196
- docxml.xpath("//xmlns:eref[@citeas = '#{docid}']").each do |e|
197
- if @files[docid]
198
- update_anchor_loc(bib, e, docid)
199
- else
200
- e << "<strong>** Unresolved reference to document #{docid}, id #{e['bibitemid']}</strong>"
201
- end
202
- end
203
- end
204
-
205
- def update_anchor_loc(bib, e, docid)
206
- loc = e.at(ns(".//locality[@type = 'anchor']")) or return update_anchor_create_loc(bib, e, docid)
207
- document_suffix = Metanorma::Utils::to_ncname(docid)
208
- ref = loc.at(ns("./referenceFrom")) || return
209
- anchor = "#{ref.text}_#{document_suffix}"
210
- return unless @files[docid][:anchors].inject([]) { |m, (_, x)| m+= x.values }.include?(anchor)
211
- ref.content = anchor
212
- end
213
-
214
- # if there is a crossref to another document, with no anchor, retrieve the
215
- # anchor given the locality, and insert it into the crossref
216
- def update_anchor_create_loc(bib, e, docid)
217
- ins = e.at(ns("./localityStack")) || return
218
- type = ins&.at(ns("./locality/@type"))&.text
219
- ref = ins&.at(ns("./locality/referenceFrom"))&.text
220
- (anchor = @files[docid][:anchors][type][ref]) || return
221
- ref_from = Nokogiri::XML::Node.new "referenceFrom", bib
222
- ref_from.content = anchor.sub(/^_/, "")
223
- locality = Nokogiri::XML::Node.new "locality", bib
224
- locality[:type] = "anchor"
225
- locality.add_child ref_from
226
- ins << locality
227
- end
228
-
229
81
  # compile and output individual file in collection
230
82
  def file_compile(f, filename, identifier)
231
83
  # warn "metanorma compile -x html #{f.path}"
232
84
  c = Compile.new
233
- c.compile f.path, { format: :asciidoc, extension_keys: @format }.merge(@compile_options)
85
+ c.compile f.path, { format: :asciidoc,
86
+ extension_keys: @format }.merge(@compile_options)
234
87
  @files[identifier][:outputs] = {}
235
88
  @format.each do |e|
236
89
  ext = c.processor.output_formats[e]
@@ -240,38 +93,11 @@ module Metanorma
240
93
  end
241
94
  end
242
95
 
243
- # gather internal bibitem references
244
- def gather_internal_refs
245
- @files.each_with_object({}) do |(identifier, x), refs|
246
- file, _ = targetfile(x, true)
247
- Nokogiri::XML(file).xpath(ns("//bibitem[@type = 'internal']/docidentifier[@type = 'repository']")).each do |d|
248
- a = d.text.split(%r{/}, 2)
249
- a.size > 1 or next
250
- refs[a[0]] ||= {}
251
- refs[a[0]][a[1]] = true
252
- end
253
- end
254
- end
255
-
256
- # resolve file location for the target of each internal reference
257
- def locate_internal_refs
258
- refs = gather_internal_refs
259
- @files.each do |identifier, x|
260
- file, filename = targetfile(x, true)
261
- docxml = Nokogiri::XML(file)
262
- refs.each do |schema, ids|
263
- ids.keys.each do |id|
264
- n = docxml.at("//*[@id = '#{id}']") and n.at("./ancestor-or-self::*[@type = '#{schema}']") and
265
- refs[schema][id] = identifier
266
- end
267
- end
268
- end
269
- refs.each do |schema, ids|
270
- ids.each do |id, key|
271
- key == true and refs[schema][id] = "Missing:#{schema}:#{id}"
272
- end
273
- end
274
- refs
96
+ def copy_file_to_dest(fileref)
97
+ _file, filename = targetfile(fileref, true, false)
98
+ dest = File.join(@outdir, fileref[:rel_path])
99
+ FileUtils.mkdir_p(File.dirname(dest))
100
+ FileUtils.cp filename, dest
275
101
  end
276
102
 
277
103
  # process each file in the collection
@@ -279,12 +105,15 @@ module Metanorma
279
105
  def files # rubocop:disable Metrics/AbcSize, Metrics/MethodLength
280
106
  internal_refs = locate_internal_refs
281
107
  @files.each do |identifier, x|
282
- file, filename = targetfile(x, true)
283
- file = update_xrefs(file, identifier, internal_refs)
284
- Tempfile.open(["collection", ".xml"], encoding: "utf-8") do |f|
285
- f.write(file)
286
- f.close
287
- file_compile(f, filename, identifier)
108
+ if x[:attachment] then copy_file_to_dest(x)
109
+ else
110
+ file, filename = targetfile(x, true)
111
+ file = update_xrefs(file, identifier, internal_refs)
112
+ Tempfile.open(["collection", ".xml"], encoding: "utf-8") do |f|
113
+ f.write(file)
114
+ f.close
115
+ file_compile(f, filename, identifier)
116
+ end
288
117
  end
289
118
  end
290
119
  end