metamri 0.2.8 → 0.2.9

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
@@ -0,0 +1,9 @@
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+ Gemfile.lock
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+ *.log
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+ *.gem
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+ ._*
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+ .idea
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+ *~
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+ test/fixtures/visit_raw_data_directory
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+ doc/*
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+ coverage
data/Rakefile CHANGED
@@ -3,27 +3,8 @@ require 'rake'
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  require 'rdoc/task'
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  require 'rake/testtask'
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5
 
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- begin
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- require 'jeweler'
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- Jeweler::Tasks.new do |gemspec|
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- gemspec.name = "metamri"
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- gemspec.summary = "MRI metadata"
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- gemspec.description = "Extraction of MRI metadata and insertion into compatible sqlite3 databases."
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- gemspec.email = "kk4@medicine.wisc.edu"
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- gemspec.homepage = "http://github.com/brainmap/metamri"
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- gemspec.authors = ["Kristopher J. Kosmatka", "Erik Kastman"]
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- gemspec.add_dependency('sqlite3', '~>1.3.3')
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- gemspec.add_dependency('dicom', '~>0.8.0')
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- gemspec.add_dependency('activeresource', '~>3.0')
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- gemspec.add_dependency('rmagick', '~>2.13.1')
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- gemspec.add_dependency('hirb', '~>0.4')
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- gemspec.add_development_dependency('rspec', '~>2.5')
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- gemspec.add_development_dependency('escoffier')
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- end
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- Jeweler::GemcutterTasks.new
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- rescue LoadError
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- puts "Jeweler not available. Install it with: sudo gem install jeweler"
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- end
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+ require 'bundler/gem_tasks'
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+
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  begin
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  require 'spec/rake/spectask'
@@ -22,6 +22,7 @@ require 'metamri/visit_raw_data_directory_resource'
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  require 'metamri/image_dataset_quality_check_resource'
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  require 'metamri/dicom_additions'
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  require 'metamri/raw_image_dataset_thumbnail'
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+ require 'metamri/version'
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  require 'fileutils'
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  # TODO Move raw_image_dataset_thumbnail out of metamri.
@@ -32,4 +33,7 @@ rescue LoadError
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  puts "Hirb must be installed for pretty output. Use 'sudo gem install hirb'"
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  end
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- # module Metamri; end
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+ # Initial Definition of Metamri Namespace
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+ # TODO: Metamri is not currently namespaced - this declaration is a teaser
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+ # used for updating to Bundler-style gemspec VERSION constant.
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+ module Metamri; end
@@ -1,5 +1,5 @@
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  require 'rubygems'
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- require 'sqlite3'
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+ # require 'sqlite3'
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  require 'fileutils'
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  require 'metamri/nifti_builder'
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@@ -1,7 +1,7 @@
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  require 'pp'
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  require 'rubygems';
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  require 'yaml';
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- require 'sqlite3';
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+ # require 'sqlite3';
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  require 'dicom'
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@@ -0,0 +1,3 @@
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+ module Metamri
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+ VERSION = "0.2.9"
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+ end
@@ -4,7 +4,7 @@ require 'tempfile'
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  require 'yaml'
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  require 'tmpdir'
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  require 'fileutils'
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- require 'sqlite3'
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+ # require 'sqlite3'
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  require 'logger'
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  require 'pp'
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  require 'metamri/raw_image_file'
@@ -1,156 +1,29 @@
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- # Generated by jeweler
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- # DO NOT EDIT THIS FILE DIRECTLY
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- # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
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  # -*- encoding: utf-8 -*-
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+ $:.push File.expand_path("../lib", __FILE__)
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+ require "metamri/version"
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  Gem::Specification.new do |s|
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  s.name = %q{metamri}
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- s.version = "0.2.8"
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+ s.version = Metamri::VERSION
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- s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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  s.authors = ["Kristopher J. Kosmatka", "Erik Kastman"]
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- s.date = %q{2011-07-28}
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- s.description = %q{Extraction of MRI metadata and insertion into compatible sqlite3 databases.}
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- s.email = %q{kk4@medicine.wisc.edu}
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- s.executables = ["convert_visit.rb", "import_visit.rb", "import_respiratory_files.rb", "import_study.rb", "list_visit"]
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- s.extra_rdoc_files = [
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- "README.rdoc"
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- ]
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- s.files = [
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- ".rspec",
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- "Gemfile",
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- "Gemfile.lock",
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- "Manifest",
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- "README.rdoc",
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- "Rakefile",
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- "VERSION",
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- "bin/convert_visit.rb",
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- "bin/import_respiratory_files.rb",
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- "bin/import_study.rb",
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- "bin/import_visit.rb",
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- "bin/list_visit",
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- "lib/metamri.rb",
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- "lib/metamri/core_additions.rb",
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- "lib/metamri/dicom_additions.rb",
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- "lib/metamri/image_dataset_quality_check_resource.rb",
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- "lib/metamri/mysql_tools.rb",
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- "lib/metamri/nifti_builder.rb",
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- "lib/metamri/raw_image_dataset.rb",
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- "lib/metamri/raw_image_dataset_resource.rb",
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- "lib/metamri/raw_image_dataset_thumbnail.rb",
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- "lib/metamri/raw_image_file.rb",
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- "lib/metamri/series_description_parameters.rb",
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- "lib/metamri/visit_raw_data_directory.rb",
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- "lib/metamri/visit_raw_data_directory_resource.rb",
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- "metamri.gemspec",
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- "spec/helper_spec.rb",
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- "spec/unit/dicom_additions_spec.rb",
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- "spec/unit/nifti_builder_spec.rb",
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- "spec/unit/raw_image_dataset_spec.rb",
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- "spec/unit/raw_image_dataset_thumbnail_spec.rb",
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- "spec/unit/raw_image_file_spec.rb",
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- "test/fixtures/respiratory_fixtures.yaml",
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- "test/fixtures/s03_bravo.0156",
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- "test/fixtures/s03_bravo.0156.yml",
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- "test/fixtures/thumbnail.png",
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- "test/fixtures/thumbnail_slicer.png",
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- "test/raw_image_dataset_test.rb",
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- "test/raw_image_file_test.rb",
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- "test/test_helper.rb",
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- "test/visit_duplication_test.rb",
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- "test/visit_test.rb"
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- ]
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- s.homepage = %q{http://github.com/brainmap/metamri}
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- s.require_paths = ["lib"]
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- s.rubygems_version = %q{1.4.2}
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  s.summary = %q{MRI metadata}
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- s.test_files = [
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- "spec/helper_spec.rb",
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- "spec/unit/dicom_additions_spec.rb",
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- "spec/unit/nifti_builder_spec.rb",
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- "spec/unit/raw_image_dataset_spec.rb",
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- "spec/unit/raw_image_dataset_thumbnail_spec.rb",
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- "spec/unit/raw_image_file_spec.rb",
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- "test/raw_image_dataset_test.rb",
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- "test/raw_image_file_test.rb",
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- "test/test_helper.rb",
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- "test/visit_duplication_test.rb",
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- "test/visit_test.rb"
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- ]
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+ s.description = %q{Extraction of MRI metadata.}
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+ s.email = %q{ekk@medicine.wisc.edu}
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+ s.homepage = %q{http://github.com/brainmap/metamri}
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14
 
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- if s.respond_to? :specification_version then
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- s.specification_version = 3
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+ s.files = `git ls-files`.split("\n")
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+ s.test_files = `git ls-files -- {test,spec,features}/*`.split("\n")
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+ s.executables = `git ls-files -- bin/*`.split("\n").map{ |f| File.basename(f) }
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+ s.require_paths = ["lib"]
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19
 
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- if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
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- s.add_runtime_dependency(%q<metamri>, [">= 0"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<escoffier>, [">= 0"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<escoffier>, [">= 0"])
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- s.add_runtime_dependency(%q<sqlite3>, ["~> 1.3.3"])
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- s.add_runtime_dependency(%q<dicom>, ["~> 0.8.0"])
102
- s.add_runtime_dependency(%q<activeresource>, ["~> 3.0"])
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- s.add_runtime_dependency(%q<rmagick>, ["~> 2.13.1"])
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- s.add_runtime_dependency(%q<hirb>, ["~> 0.4"])
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- s.add_development_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_development_dependency(%q<escoffier>, [">= 0"])
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- else
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- s.add_dependency(%q<metamri>, [">= 0"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<escoffier>, [">= 0"])
121
- s.add_dependency(%q<rspec>, ["~> 2.5"])
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- s.add_dependency(%q<escoffier>, [">= 0"])
123
- s.add_dependency(%q<sqlite3>, ["~> 1.3.3"])
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- s.add_dependency(%q<dicom>, ["~> 0.8.0"])
125
- s.add_dependency(%q<activeresource>, ["~> 3.0"])
126
- s.add_dependency(%q<rmagick>, ["~> 2.13.1"])
127
- s.add_dependency(%q<hirb>, ["~> 0.4"])
128
- s.add_dependency(%q<rspec>, ["~> 2.5"])
129
- s.add_dependency(%q<escoffier>, [">= 0"])
130
- end
131
- else
132
- s.add_dependency(%q<metamri>, [">= 0"])
133
- s.add_dependency(%q<rspec>, ["~> 2.5"])
134
- s.add_dependency(%q<rspec>, ["~> 2.5"])
135
- s.add_dependency(%q<rspec>, ["~> 2.5"])
136
- s.add_dependency(%q<rspec>, ["~> 2.5"])
137
- s.add_dependency(%q<rspec>, ["~> 2.5"])
138
- s.add_dependency(%q<rspec>, ["~> 2.5"])
139
- s.add_dependency(%q<rspec>, ["~> 2.5"])
140
- s.add_dependency(%q<rspec>, ["~> 2.5"])
141
- s.add_dependency(%q<rspec>, ["~> 2.5"])
142
- s.add_dependency(%q<rspec>, ["~> 2.5"])
143
- s.add_dependency(%q<rspec>, ["~> 2.5"])
144
- s.add_dependency(%q<escoffier>, [">= 0"])
145
- s.add_dependency(%q<rspec>, ["~> 2.5"])
146
- s.add_dependency(%q<escoffier>, [">= 0"])
147
- s.add_dependency(%q<sqlite3>, ["~> 1.3.3"])
148
- s.add_dependency(%q<dicom>, ["~> 0.8.0"])
149
- s.add_dependency(%q<activeresource>, ["~> 3.0"])
150
- s.add_dependency(%q<rmagick>, ["~> 2.13.1"])
151
- s.add_dependency(%q<hirb>, ["~> 0.4"])
152
- s.add_dependency(%q<rspec>, ["~> 2.5"])
153
- s.add_dependency(%q<escoffier>, [">= 0"])
154
- end
20
+ s.add_runtime_dependency('dicom', "~> 0.8.0")
21
+ s.add_runtime_dependency('activeresource', "~> 3.0")
22
+ s.add_runtime_dependency('rmagick', "~> 2.13.1")
23
+ s.add_runtime_dependency('hirb', "~> 0.4")
24
+
25
+ s.add_development_dependency('rspec', "~> 2.5")
26
+ s.add_development_dependency('escoffier', ">= 0")
27
+
155
28
  end
156
29
 
metadata CHANGED
@@ -1,13 +1,13 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: metamri
3
3
  version: !ruby/object:Gem::Version
4
- hash: 7
4
+ hash: 5
5
5
  prerelease:
6
6
  segments:
7
7
  - 0
8
8
  - 2
9
- - 8
10
- version: 0.2.8
9
+ - 9
10
+ version: 0.2.9
11
11
  platform: ruby
12
12
  authors:
13
13
  - Kristopher J. Kosmatka
@@ -16,252 +16,13 @@ autorequire:
16
16
  bindir: bin
17
17
  cert_chain: []
18
18
 
19
- date: 2011-07-28 00:00:00 -05:00
19
+ date: 2011-08-18 00:00:00 -05:00
20
20
  default_executable:
21
21
  dependencies:
22
22
  - !ruby/object:Gem::Dependency
23
- prerelease: false
24
- name: metamri
25
- type: :runtime
26
- version_requirements: &id001 !ruby/object:Gem::Requirement
27
- none: false
28
- requirements:
29
- - - ">="
30
- - !ruby/object:Gem::Version
31
- hash: 3
32
- segments:
33
- - 0
34
- version: "0"
35
- requirement: *id001
36
- - !ruby/object:Gem::Dependency
37
- prerelease: false
38
- name: rspec
39
- type: :development
40
- version_requirements: &id002 !ruby/object:Gem::Requirement
41
- none: false
42
- requirements:
43
- - - ~>
44
- - !ruby/object:Gem::Version
45
- hash: 9
46
- segments:
47
- - 2
48
- - 5
49
- version: "2.5"
50
- requirement: *id002
51
- - !ruby/object:Gem::Dependency
52
- prerelease: false
53
- name: rspec
54
- type: :development
55
- version_requirements: &id003 !ruby/object:Gem::Requirement
56
- none: false
57
- requirements:
58
- - - ~>
59
- - !ruby/object:Gem::Version
60
- hash: 9
61
- segments:
62
- - 2
63
- - 5
64
- version: "2.5"
65
- requirement: *id003
66
- - !ruby/object:Gem::Dependency
67
- prerelease: false
68
- name: rspec
69
- type: :development
70
- version_requirements: &id004 !ruby/object:Gem::Requirement
71
- none: false
72
- requirements:
73
- - - ~>
74
- - !ruby/object:Gem::Version
75
- hash: 9
76
- segments:
77
- - 2
78
- - 5
79
- version: "2.5"
80
- requirement: *id004
81
- - !ruby/object:Gem::Dependency
82
- prerelease: false
83
- name: rspec
84
- type: :development
85
- version_requirements: &id005 !ruby/object:Gem::Requirement
86
- none: false
87
- requirements:
88
- - - ~>
89
- - !ruby/object:Gem::Version
90
- hash: 9
91
- segments:
92
- - 2
93
- - 5
94
- version: "2.5"
95
- requirement: *id005
96
- - !ruby/object:Gem::Dependency
97
- prerelease: false
98
- name: rspec
99
- type: :development
100
- version_requirements: &id006 !ruby/object:Gem::Requirement
101
- none: false
102
- requirements:
103
- - - ~>
104
- - !ruby/object:Gem::Version
105
- hash: 9
106
- segments:
107
- - 2
108
- - 5
109
- version: "2.5"
110
- requirement: *id006
111
- - !ruby/object:Gem::Dependency
112
- prerelease: false
113
- name: rspec
114
- type: :development
115
- version_requirements: &id007 !ruby/object:Gem::Requirement
116
- none: false
117
- requirements:
118
- - - ~>
119
- - !ruby/object:Gem::Version
120
- hash: 9
121
- segments:
122
- - 2
123
- - 5
124
- version: "2.5"
125
- requirement: *id007
126
- - !ruby/object:Gem::Dependency
127
- prerelease: false
128
- name: rspec
129
- type: :development
130
- version_requirements: &id008 !ruby/object:Gem::Requirement
131
- none: false
132
- requirements:
133
- - - ~>
134
- - !ruby/object:Gem::Version
135
- hash: 9
136
- segments:
137
- - 2
138
- - 5
139
- version: "2.5"
140
- requirement: *id008
141
- - !ruby/object:Gem::Dependency
142
- prerelease: false
143
- name: rspec
144
- type: :development
145
- version_requirements: &id009 !ruby/object:Gem::Requirement
146
- none: false
147
- requirements:
148
- - - ~>
149
- - !ruby/object:Gem::Version
150
- hash: 9
151
- segments:
152
- - 2
153
- - 5
154
- version: "2.5"
155
- requirement: *id009
156
- - !ruby/object:Gem::Dependency
157
- prerelease: false
158
- name: rspec
159
- type: :development
160
- version_requirements: &id010 !ruby/object:Gem::Requirement
161
- none: false
162
- requirements:
163
- - - ~>
164
- - !ruby/object:Gem::Version
165
- hash: 9
166
- segments:
167
- - 2
168
- - 5
169
- version: "2.5"
170
- requirement: *id010
171
- - !ruby/object:Gem::Dependency
172
- prerelease: false
173
- name: rspec
174
- type: :development
175
- version_requirements: &id011 !ruby/object:Gem::Requirement
176
- none: false
177
- requirements:
178
- - - ~>
179
- - !ruby/object:Gem::Version
180
- hash: 9
181
- segments:
182
- - 2
183
- - 5
184
- version: "2.5"
185
- requirement: *id011
186
- - !ruby/object:Gem::Dependency
187
- prerelease: false
188
- name: rspec
189
- type: :development
190
- version_requirements: &id012 !ruby/object:Gem::Requirement
191
- none: false
192
- requirements:
193
- - - ~>
194
- - !ruby/object:Gem::Version
195
- hash: 9
196
- segments:
197
- - 2
198
- - 5
199
- version: "2.5"
200
- requirement: *id012
201
- - !ruby/object:Gem::Dependency
202
- prerelease: false
203
- name: escoffier
204
- type: :development
205
- version_requirements: &id013 !ruby/object:Gem::Requirement
206
- none: false
207
- requirements:
208
- - - ">="
209
- - !ruby/object:Gem::Version
210
- hash: 3
211
- segments:
212
- - 0
213
- version: "0"
214
- requirement: *id013
215
- - !ruby/object:Gem::Dependency
216
- prerelease: false
217
- name: rspec
218
- type: :development
219
- version_requirements: &id014 !ruby/object:Gem::Requirement
220
- none: false
221
- requirements:
222
- - - ~>
223
- - !ruby/object:Gem::Version
224
- hash: 9
225
- segments:
226
- - 2
227
- - 5
228
- version: "2.5"
229
- requirement: *id014
230
- - !ruby/object:Gem::Dependency
231
- prerelease: false
232
- name: escoffier
233
- type: :development
234
- version_requirements: &id015 !ruby/object:Gem::Requirement
235
- none: false
236
- requirements:
237
- - - ">="
238
- - !ruby/object:Gem::Version
239
- hash: 3
240
- segments:
241
- - 0
242
- version: "0"
243
- requirement: *id015
244
- - !ruby/object:Gem::Dependency
245
- prerelease: false
246
- name: sqlite3
247
- type: :runtime
248
- version_requirements: &id016 !ruby/object:Gem::Requirement
249
- none: false
250
- requirements:
251
- - - ~>
252
- - !ruby/object:Gem::Version
253
- hash: 29
254
- segments:
255
- - 1
256
- - 3
257
- - 3
258
- version: 1.3.3
259
- requirement: *id016
260
- - !ruby/object:Gem::Dependency
261
- prerelease: false
262
23
  name: dicom
263
- type: :runtime
264
- version_requirements: &id017 !ruby/object:Gem::Requirement
24
+ prerelease: false
25
+ requirement: &id001 !ruby/object:Gem::Requirement
265
26
  none: false
266
27
  requirements:
267
28
  - - ~>
@@ -272,12 +33,12 @@ dependencies:
272
33
  - 8
273
34
  - 0
274
35
  version: 0.8.0
275
- requirement: *id017
36
+ type: :runtime
37
+ version_requirements: *id001
276
38
  - !ruby/object:Gem::Dependency
277
- prerelease: false
278
39
  name: activeresource
279
- type: :runtime
280
- version_requirements: &id018 !ruby/object:Gem::Requirement
40
+ prerelease: false
41
+ requirement: &id002 !ruby/object:Gem::Requirement
281
42
  none: false
282
43
  requirements:
283
44
  - - ~>
@@ -287,12 +48,12 @@ dependencies:
287
48
  - 3
288
49
  - 0
289
50
  version: "3.0"
290
- requirement: *id018
51
+ type: :runtime
52
+ version_requirements: *id002
291
53
  - !ruby/object:Gem::Dependency
292
- prerelease: false
293
54
  name: rmagick
294
- type: :runtime
295
- version_requirements: &id019 !ruby/object:Gem::Requirement
55
+ prerelease: false
56
+ requirement: &id003 !ruby/object:Gem::Requirement
296
57
  none: false
297
58
  requirements:
298
59
  - - ~>
@@ -303,12 +64,12 @@ dependencies:
303
64
  - 13
304
65
  - 1
305
66
  version: 2.13.1
306
- requirement: *id019
67
+ type: :runtime
68
+ version_requirements: *id003
307
69
  - !ruby/object:Gem::Dependency
308
- prerelease: false
309
70
  name: hirb
310
- type: :runtime
311
- version_requirements: &id020 !ruby/object:Gem::Requirement
71
+ prerelease: false
72
+ requirement: &id004 !ruby/object:Gem::Requirement
312
73
  none: false
313
74
  requirements:
314
75
  - - ~>
@@ -318,12 +79,12 @@ dependencies:
318
79
  - 0
319
80
  - 4
320
81
  version: "0.4"
321
- requirement: *id020
82
+ type: :runtime
83
+ version_requirements: *id004
322
84
  - !ruby/object:Gem::Dependency
323
- prerelease: false
324
85
  name: rspec
325
- type: :development
326
- version_requirements: &id021 !ruby/object:Gem::Requirement
86
+ prerelease: false
87
+ requirement: &id005 !ruby/object:Gem::Requirement
327
88
  none: false
328
89
  requirements:
329
90
  - - ~>
@@ -333,12 +94,12 @@ dependencies:
333
94
  - 2
334
95
  - 5
335
96
  version: "2.5"
336
- requirement: *id021
97
+ type: :development
98
+ version_requirements: *id005
337
99
  - !ruby/object:Gem::Dependency
338
- prerelease: false
339
100
  name: escoffier
340
- type: :development
341
- version_requirements: &id022 !ruby/object:Gem::Requirement
101
+ prerelease: false
102
+ requirement: &id006 !ruby/object:Gem::Requirement
342
103
  none: false
343
104
  requirements:
344
105
  - - ">="
@@ -347,23 +108,24 @@ dependencies:
347
108
  segments:
348
109
  - 0
349
110
  version: "0"
350
- requirement: *id022
351
- description: Extraction of MRI metadata and insertion into compatible sqlite3 databases.
352
- email: kk4@medicine.wisc.edu
111
+ type: :development
112
+ version_requirements: *id006
113
+ description: Extraction of MRI metadata.
114
+ email: ekk@medicine.wisc.edu
353
115
  executables:
354
116
  - convert_visit.rb
355
- - import_visit.rb
356
117
  - import_respiratory_files.rb
357
118
  - import_study.rb
119
+ - import_visit.rb
358
120
  - list_visit
359
121
  extensions: []
360
122
 
361
- extra_rdoc_files:
362
- - README.rdoc
123
+ extra_rdoc_files: []
124
+
363
125
  files:
126
+ - .gitignore
364
127
  - .rspec
365
128
  - Gemfile
366
- - Gemfile.lock
367
129
  - Manifest
368
130
  - README.rdoc
369
131
  - Rakefile
@@ -384,6 +146,7 @@ files:
384
146
  - lib/metamri/raw_image_dataset_thumbnail.rb
385
147
  - lib/metamri/raw_image_file.rb
386
148
  - lib/metamri/series_description_parameters.rb
149
+ - lib/metamri/version.rb
387
150
  - lib/metamri/visit_raw_data_directory.rb
388
151
  - lib/metamri/visit_raw_data_directory_resource.rb
389
152
  - metamri.gemspec
@@ -444,6 +207,11 @@ test_files:
444
207
  - spec/unit/raw_image_dataset_spec.rb
445
208
  - spec/unit/raw_image_dataset_thumbnail_spec.rb
446
209
  - spec/unit/raw_image_file_spec.rb
210
+ - test/fixtures/respiratory_fixtures.yaml
211
+ - test/fixtures/s03_bravo.0156
212
+ - test/fixtures/s03_bravo.0156.yml
213
+ - test/fixtures/thumbnail.png
214
+ - test/fixtures/thumbnail_slicer.png
447
215
  - test/raw_image_dataset_test.rb
448
216
  - test/raw_image_file_test.rb
449
217
  - test/test_helper.rb
@@ -1,52 +0,0 @@
1
- PATH
2
- remote: .
3
- specs:
4
- metamri (0.2.7)
5
- activeresource (~> 3.0)
6
- dicom (~> 0.8.0)
7
- hirb (~> 0.4)
8
- metamri
9
- rmagick (~> 2.13.1)
10
- sqlite3 (~> 1.3.3)
11
-
12
- GEM
13
- remote: http://rubygems.org/
14
- specs:
15
- activemodel (3.0.9)
16
- activesupport (= 3.0.9)
17
- builder (~> 2.1.2)
18
- i18n (~> 0.5.0)
19
- activeresource (3.0.9)
20
- activemodel (= 3.0.9)
21
- activesupport (= 3.0.9)
22
- activesupport (3.0.9)
23
- builder (2.1.2)
24
- bzip2-ruby (0.2.7)
25
- dicom (0.8)
26
- diff-lcs (1.1.2)
27
- escoffier (0.1.3)
28
- bzip2-ruby
29
- snmp
30
- term-ansicolor
31
- hirb (0.4.5)
32
- i18n (0.5.0)
33
- rmagick (2.13.1)
34
- rspec (2.6.0)
35
- rspec-core (~> 2.6.0)
36
- rspec-expectations (~> 2.6.0)
37
- rspec-mocks (~> 2.6.0)
38
- rspec-core (2.6.4)
39
- rspec-expectations (2.6.0)
40
- diff-lcs (~> 1.1.2)
41
- rspec-mocks (2.6.0)
42
- snmp (1.0.3)
43
- sqlite3 (1.3.4)
44
- term-ansicolor (1.0.5)
45
-
46
- PLATFORMS
47
- ruby
48
-
49
- DEPENDENCIES
50
- escoffier
51
- metamri!
52
- rspec (~> 2.5)