lederhosen 3.1.0 → 3.2.0

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data/Gemfile CHANGED
@@ -1,6 +1,6 @@
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  source 'https://rubygems.org'
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- gem "dna", :git => 'http://github.com/audy/dna.git', :tag => 'v0.2.1'
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+ gem 'dna', '0.3.0'
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  gem 'progressbar', '0.12.0'
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  gem 'thor', '0.16.0'
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data/lederhosen.gemspec CHANGED
@@ -5,11 +5,11 @@
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  Gem::Specification.new do |s|
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  s.name = "lederhosen"
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- s.version = "3.1.0"
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+ s.version = "3.2.0"
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  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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  s.authors = ["Austin G. Davis-Richardson"]
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- s.date = "2013-07-03"
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+ s.date = "2013-08-02"
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  s.description = "Various tools for OTU clustering"
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  s.email = "harekrishna@gmail.com"
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  s.executables = ["lederhosen"]
@@ -65,20 +65,20 @@ Gem::Specification.new do |s|
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  s.specification_version = 3
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  if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
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- s.add_runtime_dependency(%q<dna>, [">= 0"])
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+ s.add_runtime_dependency(%q<dna>, ["= 0.3.0"])
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  s.add_runtime_dependency(%q<progressbar>, ["= 0.12.0"])
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  s.add_runtime_dependency(%q<thor>, ["= 0.16.0"])
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  s.add_development_dependency(%q<rdoc>, ["~> 3.12"])
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  s.add_development_dependency(%q<jeweler>, ["= 1.8.4"])
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  else
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- s.add_dependency(%q<dna>, [">= 0"])
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+ s.add_dependency(%q<dna>, ["= 0.3.0"])
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  s.add_dependency(%q<progressbar>, ["= 0.12.0"])
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  s.add_dependency(%q<thor>, ["= 0.16.0"])
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  s.add_dependency(%q<rdoc>, ["~> 3.12"])
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  s.add_dependency(%q<jeweler>, ["= 1.8.4"])
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  end
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  else
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- s.add_dependency(%q<dna>, [">= 0"])
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+ s.add_dependency(%q<dna>, ["= 0.3.0"])
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  s.add_dependency(%q<progressbar>, ["= 0.12.0"])
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  s.add_dependency(%q<thor>, ["= 0.16.0"])
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  s.add_dependency(%q<rdoc>, ["~> 3.12"])
@@ -1,8 +1,8 @@
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  module Lederhosen
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  module Version
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  MAJOR = 3
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- MINOR = 1
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- CODENAME = 'Hauptbahnhof' # changes for minor versions
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+ MINOR = 2
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+ CODENAME = 'Tandem-Fahrrad' # changes for minor versions
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  PATCH = 0
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  string = [MAJOR, MINOR, PATCH].join('.')
data/readme.md CHANGED
@@ -27,10 +27,13 @@ the USEARCH license, Lederhosen is free for commercial use.
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  ### Installation
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+ Tested using Ruby 1.9.3 and 2.0.0 (1.8.7 not supported)
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+
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  0. Obtain & Install [USEARCH](http://www.drive5.com/).
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  1. Get a database:
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  - [TaxCollector](http://github.com/audy/taxcollector)
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- - [GreenGenes](http://greengenes.lbl.gov) 16S database
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+ - [GreenGenes 13.5 Rep. Set](http://greengenes.secondgenome.com/downloads) 16S
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+ database (**recommended**)
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  - File an [issue report](https://github.com/audy/lederhosen/issues) or pull request ;) to request support for a different database.
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  2. Install Lederhosen by typing:
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@@ -39,7 +42,7 @@ the USEARCH license, Lederhosen is free for commercial use.
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  ### Need Help?
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- Bug me: [@heyaudy](http://twitter.com/heyaudy) (twitter)
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+ Tweets: [@heyaudy](http://twitter.com/heyaudy).
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  ## Tasks
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metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: lederhosen
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  version: !ruby/object:Gem::Version
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- version: 3.1.0
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+ version: 3.2.0
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  prerelease:
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  platform: ruby
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  authors:
@@ -9,24 +9,24 @@ authors:
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2013-07-03 00:00:00.000000000 Z
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+ date: 2013-08-02 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: dna
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  requirement: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ! '>='
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+ - - '='
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  - !ruby/object:Gem::Version
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- version: '0'
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+ version: 0.3.0
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  type: :runtime
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  prerelease: false
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  version_requirements: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ! '>='
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+ - - '='
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  - !ruby/object:Gem::Version
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- version: '0'
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+ version: 0.3.0
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  - !ruby/object:Gem::Dependency
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  name: progressbar
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  requirement: !ruby/object:Gem::Requirement
@@ -151,7 +151,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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  version: '0'
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  segments:
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  - 0
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- hash: -391146498945924903
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+ hash: -502231150747974462
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  required_rubygems_version: !ruby/object:Gem::Requirement
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  none: false
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  requirements: