lederhosen 2.0.3 → 2.0.4
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- data/lederhosen.gemspec +1 -1
- data/lib/lederhosen/tasks/otu_filter.rb +4 -3
- data/lib/lederhosen/version.rb +1 -1
- metadata +2 -2
data/lederhosen.gemspec
CHANGED
@@ -25,7 +25,7 @@ module Lederhosen
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# slurp up CSV file
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File.open input do |handle|
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header = handle.gets.strip.split(',')
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28
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-
cluster_ids = header[
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+
cluster_ids = header[0..-1]
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handle.each do |line|
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line = line.strip.split(',')
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sample_id = line[0].to_sym
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@@ -53,13 +53,14 @@ module Lederhosen
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samples = filtered.values.map(&:keys).flatten.uniq
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clusters = filtered.keys
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out.puts "-,#{clusters.join(',')},noise"
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+
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samples.each do |sample|
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out.print "#{sample}"
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clusters.each do |cluster|
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out.print ",#{filtered[cluster][sample]}"
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end
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-
noise_sum = noise.map { |n| cluster_sample_count[n][sample]}.inject(:+)
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-
out.print ",#{noise_sum}"
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+
noise_sum = noise.map { |n| cluster_sample_count[n][sample] }.inject(:+)
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+
out.print ",#{noise_sum || 0}"
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out.print "\n"
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end
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out.close
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data/lib/lederhosen/version.rb
CHANGED
metadata
CHANGED
@@ -1,7 +1,7 @@
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--- !ruby/object:Gem::Specification
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name: lederhosen
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version: !ruby/object:Gem::Version
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4
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-
version: 2.0.
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4
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+
version: 2.0.4
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prerelease:
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platform: ruby
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authors:
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@@ -148,7 +148,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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version: '0'
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segments:
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- 0
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-
hash:
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+
hash: -4055931160934268209
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required_rubygems_version: !ruby/object:Gem::Requirement
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none: false
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requirements:
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