lederhosen 2.0.2 → 2.0.3

data/lederhosen.gemspec

@@ -5,7 +5,7 @@
 
 Gem::Specification.new do |s|
   s.name = "lederhosen"
-  s.version = "2.0.2"
+  s.version = "2.0.3"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Austin G. Davis-Richardson"]

data/lib/lederhosen/tasks/count_taxonomies.rb

@@ -21,6 +21,7 @@ module Lederhosen
       taxonomy_count =
         if not strict
           get_taxonomy_count(uc)
+
         elsif strict
           get_strict_taxonomy_count(uc, strict)
         end
@@ -77,7 +78,7 @@ module Lederhosen
         end # results.each_slice
         taxonomy_count
       end
-      
+
     end
   end
 end

data/lib/lederhosen/uc_parser.rb

@@ -1,24 +1,36 @@
-require 'ostruct'
-
 module Lederhosen
 
   # represents a usearch result
   class UResult
 
-    def initialize(hash)
-      @source = OpenStruct.new(hash)
-    end
+    attr_accessor :hit_type,
+                  :cluster_no,
+                  :alignment,
+                  :query,
+                  :target,
+                  :length,
+                  :identity,
+                  :strand,
+                  :cluster_size
 
-    def method_missing(method, *args, &block)
-      @source.send(method, *args, &block)
+    def initialize(hash)
+      self.hit_type = hash[:hit_type]
+      self.cluster_no = hash[:cluster_no]
+      self.alignment = hash[:alignment]
+      self.target = hash[:target]
+      self.query = hash[:query]
+      self.length = hash[:length]
+      self.identity = hash[:identity]
+      self.strand = hash[:strand]
+      self.cluster_size = hash[:cluster_size]
     end
 
     def hit?
-      @source.hit_type == 'H'
+      self.hit_type == 'H'
     end
 
     def miss?
-      @source.hit_type == 'N'
+      self.hit_type == 'N'
     end
   end
 
@@ -40,7 +52,7 @@ module Lederhosen
     end
 
     private
-    
+
     # parse a line of usearch prefix
     # return a hash in the form:
     # { :taxonomy => '', :identity => '0.00', ... }
@@ -85,4 +97,4 @@ module Lederhosen
       dat.merge(r)
     end
   end
-end
+end

data/lib/lederhosen/version.rb

@@ -3,7 +3,7 @@ module Lederhosen
     MAJOR = 2
     MINOR = 0
     CODENAME = 'Schnittlauchbrot' # changes for minor versions
-    PATCH = 2
+    PATCH = 3
 
     STRING = [MAJOR, MINOR, PATCH].join('.')
   end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: lederhosen
 version: !ruby/object:Gem::Version
-  version: 2.0.2
+  version: 2.0.3
   prerelease: 
 platform: ruby
 authors:
@@ -148,7 +148,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: 525006201673816034
+      hash: 3754039261049912436
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements: