lederhosen 0.0.7 → 0.0.8
Sign up to get free protection for your applications and to get access to all the features.
- data/lib/lederhosen/tasks/join.rb +8 -1
- data/lib/version.rb +1 -1
- metadata +3 -3
@@ -23,7 +23,14 @@ module Lederhosen
|
|
23
23
|
|
24
24
|
trimmed.each do |fasta_file|
|
25
25
|
pbar.inc
|
26
|
-
|
26
|
+
|
27
|
+
begin
|
28
|
+
records = Dna.new File.open(fasta_file)
|
29
|
+
rescue
|
30
|
+
ohai "skipping #{fasta_file} (empty?)"
|
31
|
+
next
|
32
|
+
end
|
33
|
+
|
27
34
|
records.each_slice(2) do |r, l|
|
28
35
|
output.puts ">#{r.name}:#{File.basename(fasta_file, '.fasta')}\n#{r.sequence.reverse+l.sequence}"
|
29
36
|
end
|
data/lib/version.rb
CHANGED
metadata
CHANGED
@@ -1,13 +1,13 @@
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
2
2
|
name: lederhosen
|
3
3
|
version: !ruby/object:Gem::Version
|
4
|
-
hash:
|
4
|
+
hash: 15
|
5
5
|
prerelease:
|
6
6
|
segments:
|
7
7
|
- 0
|
8
8
|
- 0
|
9
|
-
-
|
10
|
-
version: 0.0.
|
9
|
+
- 8
|
10
|
+
version: 0.0.8
|
11
11
|
platform: ruby
|
12
12
|
authors:
|
13
13
|
- Austin G. Davis-Richardson
|