lederhosen 0.0.0 → 0.0.1

Sign up to get free protection for your applications and to get access to all the features.
Files changed (3) hide show
  1. data/lib/version.rb +1 -1
  2. data/readme.md +2 -5
  3. metadata +3 -3
data/lib/version.rb CHANGED
@@ -1,3 +1,3 @@
1
1
  module Lederhosen
2
- VERSION = '0.0.0'
2
+ VERSION = '0.0.1'
3
3
  end
data/readme.md CHANGED
@@ -5,10 +5,7 @@ Cluster raw Illumina 16S rRNA amplicon data to generate OTUs.
5
5
  ## How do I get Lederhosen?
6
6
 
7
7
  0. Obtain & Install uclust (64-bit)
8
- 1. Download & extract this repo.
9
- 2. `(sudo) sh setup.sh`
10
-
11
- Alternatively, you may use Bundler to install dependencies.
8
+ 1. `sudo gem install lederhosen`
12
9
 
13
10
  ## How do I use Lederhosen?
14
11
 
@@ -32,7 +29,7 @@ Type `lederhosen help` for complete instructions
32
29
 
33
30
  ### 5. Make tables & Get representative sequences
34
31
 
35
- `% lederhosen otu_table --clusters=clusters_97.5.txt`
32
+ `% lederhosen otu_table --clusters=clusters.uc --output=clusters9.75.txt`
36
33
 
37
34
  ### 6. Get fasta files with reads for each cluster
38
35
 
metadata CHANGED
@@ -1,13 +1,13 @@
1
1
  --- !ruby/object:Gem::Specification
2
2
  name: lederhosen
3
3
  version: !ruby/object:Gem::Version
4
- hash: 31
4
+ hash: 29
5
5
  prerelease:
6
6
  segments:
7
7
  - 0
8
8
  - 0
9
- - 0
10
- version: 0.0.0
9
+ - 1
10
+ version: 0.0.1
11
11
  platform: ruby
12
12
  authors:
13
13
  - Austin G. Davis-Richardson