jekyll-theme-zer0 1.4.0 → 1.4.1

checksums.yaml

@@ -1,7 +1,7 @@
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-  data.tar.gz: b4a234aef6bbb109ae6410a46d2c48a292fdd048fa47729bbe6ac728c92f20e1
+  metadata.gz: 0ae8ec5b12734cd267a46b1b5c26ed95f7d55b004e6dd9a52111a477f6bbc395
+  data.tar.gz: 84ff1429cdd6504bef5977c44ff88ff9078ffdb2dcd98ea39304c10f939daceb
 SHA512:
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+  metadata.gz: 4c194515ed9cbf3590d46b6c887b9a27c94bbdfb4a5e841417ae759e25b59bd5bf0612846ce20927361daefa42b23459152336db6fb22874ce56b05c87d0203b
+  data.tar.gz: d0469bd560f3ddfc264b22e0fd4b7f7ffed2b9c1a7f524f3975b5a574a7a2ae0c5c8bf53c25db53eec1bb4201e21078f95a45de46e3dd742569171ca15d29421

data/CHANGELOG.md

@@ -1,5 +1,14 @@
 # Changelog
 
+## [1.4.1] - 2026-04-28
+
+### Changed
+- Version bump: patch release
+
+### Commits in this release
+- 9830d3d refactor(obsidian): extract full graph include and sync docs (#82)
+
+
 ## [1.4.0] - 2026-04-25
 
 ### Changed
@@ -48,6 +57,9 @@
 
 ## [Unreleased]
 
+### Changed
+- **Docker/Jekyll build performance** — Reduced repeated full-page Liquid scans in the footer, settings offcanvas, and cookie consent includes; cached preview image checks during generation; skipped server-side Obsidian rewrites for documents without Obsidian syntax; and changed Docker dev startup to run `bundle install` only when `bundle check` reports missing dependencies. The profiled Docker build improved from 119.2s to 86.8s in local validation.
+
 ### Added
 - **Development Automation**: Added `scripts/bin/validate` and `scripts/validate`
   as the canonical preflight validation command for repository files, version

data/README.md

@@ -2,7 +2,7 @@
 title: zer0-mistakes
 sub-title: AI-Native Jekyll Theme
 description: AI-native Jekyll theme for GitHub Pages — Docker-first development, AI-powered installation, multi-agent integration (Copilot, Codex, Cursor, Claude), AI preview-image generation, and AIEO content optimization with Bootstrap 5.3.
-version: 1.4.0
+version: 1.4.1
 layout: landing
 tags:
   - jekyll
@@ -20,7 +20,7 @@ categories:
   - bootstrap
   - ai-tooling
 created: 2024-02-10T23:51:11.480Z
-lastmod: 2026-04-25T19:55:07.000Z
+lastmod: 2026-04-28T21:04:09.000Z
 draft: false
 permalink: /
 slug: zer0
@@ -1138,7 +1138,7 @@ git push origin feature/awesome-feature
 
 | Metric | Value |
 |--------|-------|
-| **Current Version** | 1.4.0 ([RubyGems](https://rubygems.org/gems/jekyll-theme-zer0), [CHANGELOG](/CHANGELOG)) |
+| **Current Version** | 1.4.1 ([RubyGems](https://rubygems.org/gems/jekyll-theme-zer0), [CHANGELOG](/CHANGELOG)) |
 | **Documented Features** | 43 ([Feature Registry](https://github.com/bamr87/zer0-mistakes/blob/main/_data/features.yml)) |
 | **Setup Time** | 2-5 minutes ([install.sh benchmarks](https://github.com/bamr87/zer0-mistakes/blob/main/install.sh)) |
 | **Documentation Pages** | 70+ ([browse docs](/pages/)) |
@@ -1189,6 +1189,6 @@ And these AI partners that make zer0-mistakes truly AI-native:
 
 **Built with ❤️ — and a little help from our AI partners — for the Jekyll community**
 
-**v1.4.0** • [Changelog](CHANGELOG.md) • [License](LICENSE) • [Contributing](CONTRIBUTING.md) • [AI Agent Guide](AGENTS.md)
+**v1.4.1** • [Changelog](CHANGELOG.md) • [License](LICENSE) • [Contributing](CONTRIBUTING.md) • [AI Agent Guide](AGENTS.md)
 
 

data/_includes/components/cookie-consent.html

@@ -59,9 +59,8 @@ Configuration: Uses site.posthog settings from _config.yml
         </p>
         <p class="mb-2 mb-lg-0 small text-white-50">
           This website uses cookies and similar technologies to enhance your browsing experience, analyze traffic, and provide personalized content.
-          {% assign _pp = site.html_pages | where: "url", "/privacy-policy/" | first %}
-          {% unless _pp %}{% assign _pp = site.html_pages | where: "url", "/privacy-policy" | first %}{% endunless %}
-          {% if _pp or site.privacy_policy_url %}
+          {% assign cookie_page_urls = site.html_pages | map: "url" | join: "|" | prepend: "|" | append: "|" %}
+          {% if site.privacy_policy_url or cookie_page_urls contains "|/privacy-policy/|" or cookie_page_urls contains "|/privacy-policy|" %}
             <a href="{{ site.privacy_policy_url | default: '/privacy-policy/' | relative_url }}" class="text-white text-decoration-underline">Learn more in our Privacy Policy</a>.
           {% endif %}
         </p>

data/_includes/components/info-section.html

@@ -22,6 +22,7 @@
 -->
 
 {% include components/env-detect.html %}
+{% assign info_section_page_urls = site.html_pages | map: "url" | join: "|" | prepend: "|" | append: "|" %}
 <!-- Settings Offcanvas -->
 <div class="offcanvas offcanvas-end" tabindex="-1" id="info-section" aria-labelledby="infoSectionLabel">
   
@@ -111,9 +112,12 @@
         <!-- Admin Quick Links — only render links to pages that actually exist
              in the build (prevents 404s on bare-minimum / remote-theme sites
              that haven't created the admin pages). -->
-        {% assign _cfg_page = site.html_pages | where: "url", "/about/config/" | first %}
-        {% assign _theme_page = site.html_pages | where: "url", "/about/settings/theme/" | first %}
-        {% assign _nav_page = site.html_pages | where: "url", "/about/settings/navigation/" | first %}
+        {% assign _cfg_page = false %}
+        {% assign _theme_page = false %}
+        {% assign _nav_page = false %}
+        {% if info_section_page_urls contains "|/about/config/|" %}{% assign _cfg_page = true %}{% endif %}
+        {% if info_section_page_urls contains "|/about/settings/theme/|" %}{% assign _theme_page = true %}{% endif %}
+        {% if info_section_page_urls contains "|/about/settings/navigation/|" %}{% assign _nav_page = true %}{% endif %}
         {% if _cfg_page or _theme_page or _nav_page %}
         <div class="mb-3">
           <h6 class="text-body-secondary small text-uppercase fw-semibold mb-2">
@@ -145,7 +149,8 @@
         {% include components/env-switcher.html %}
 
         <!-- Admin Link — only when target page exists -->
-        {% assign _env_page = site.html_pages | where: "url", "/about/settings/environment/" | first %}
+        {% assign _env_page = false %}
+        {% if info_section_page_urls contains "|/about/settings/environment/|" %}{% assign _env_page = true %}{% endif %}
         {% if _env_page %}
         <div class="mt-4 pt-3 border-top">
           <a href="{{ '/about/settings/environment/' | relative_url }}" class="btn btn-outline-secondary btn-sm w-100">

data/_includes/core/footer.html

@@ -31,6 +31,7 @@
 -->
 
 <footer class="bd-footer border-top" role="contentinfo">
+  {% assign footer_page_urls = site.html_pages | map: "url" | join: "|" | prepend: "|" | append: "|" %}
   <!-- Powered by Row -->
   <div class="container-xl my-3">
     <ul class="nav justify-content-end list-unstyled d-flex align-items-center flex-wrap" aria-label="Powered by technologies">
@@ -100,8 +101,8 @@
                   {% assign _parts = entry | split: "," %}
                   {% assign _label = _parts[0] %}
                   {% assign _url   = _parts[1] %}
-                  {% assign _page  = site.html_pages | where: "url", _url | first %}
-                  {% if _page %}
+                  {% assign _needle = "|" | append: _url | append: "|" %}
+                  {% if footer_page_urls contains _needle %}
                     <li><a href="{{ _url | relative_url }}" class="text-light text-decoration-none">{{ _label }}</a></li>
                   {% endif %}
                 {% endfor %}
@@ -169,14 +170,14 @@
           <div class="col-md-4 text-md-end">
             <ul class="list-inline mb-0">
               {% comment %} Only render policy links whose pages exist (or that are explicitly configured). {% endcomment %}
-              {% assign _privacy = site.html_pages | where: "url", "/privacy-policy/" | first %}
-              {% unless _privacy %}{% assign _privacy = site.html_pages | where: "url", "/privacy-policy" | first %}{% endunless %}
-              {% if _privacy or site.privacy_policy_url %}
+              {% assign _privacy_needle = "|/privacy-policy/|" %}
+              {% assign _privacy_alt_needle = "|/privacy-policy|" %}
+              {% if site.privacy_policy_url or footer_page_urls contains _privacy_needle or footer_page_urls contains _privacy_alt_needle %}
                 <li class="list-inline-item"><a href="{{ site.privacy_policy_url | default: '/privacy-policy' | relative_url }}" class="text-light text-decoration-none">Privacy Policy</a></li>
               {% endif %}
-              {% assign _terms = site.html_pages | where: "url", "/terms-of-service/" | first %}
-              {% unless _terms %}{% assign _terms = site.html_pages | where: "url", "/terms-of-service" | first %}{% endunless %}
-              {% if _terms or site.terms_of_service_url %}
+              {% assign _terms_needle = "|/terms-of-service/|" %}
+              {% assign _terms_alt_needle = "|/terms-of-service|" %}
+              {% if site.terms_of_service_url or footer_page_urls contains _terms_needle or footer_page_urls contains _terms_alt_needle %}
                 <li class="list-inline-item"><a href="{{ site.terms_of_service_url | default: '/terms-of-service' | relative_url }}" class="text-light text-decoration-none">Terms of Service</a></li>
               {% endif %}
               <li class="list-inline-item">

data/_includes/navigation/sidebar-left.html

@@ -48,12 +48,6 @@
   <!-- Scrollable content area with dynamic navigation options -->
   <div class="offcanvas-body overflow-auto">
 
-    <!-- ========================== -->
-    <!-- LOCAL GRAPH WIDGET        -->
-    <!-- ========================== -->
-    <!-- Mini Obsidian-style local graph of the current page + neighbors -->
-    {% include navigation/local-graph.html %}
-
     <!-- ========================== -->
     <!-- AUTO MODE: Collection Docs -->
     <!-- ========================== -->

data/_includes/obsidian/full-graph.html

@@ -0,0 +1,170 @@
+<style>
+  /* Scoped to the graph page so we don't leak into other docs. */
+  #obsidian-graph {
+    width: 100%;
+    height: 82vh;
+    min-height: 620px;
+    border: 1px solid var(--bs-border-color, #dee2e6);
+    border-radius: var(--bs-border-radius-lg, .5rem);
+    background: var(--bs-tertiary-bg, #f8f9fa);
+    box-shadow: 0 1px 2px rgba(0, 0, 0, .04), 0 4px 12px rgba(0, 0, 0, .04);
+    position: relative;
+    overflow: hidden;
+  }
+  #obsidian-graph-stats {
+    display: flex;
+    flex-wrap: wrap;
+    gap: .375rem;
+  }
+  #obsidian-graph-stats .badge {
+    font-size: .8125rem;
+    font-weight: 500;
+    padding: .35rem .6rem;
+  }
+  .obsidian-graph-toolbar {
+    display: flex;
+    flex-wrap: wrap;
+    gap: .5rem .75rem;
+    align-items: center;
+    margin: .75rem 0;
+    padding: .625rem .75rem;
+    background: var(--bs-tertiary-bg, #f8f9fa);
+    border: 1px solid var(--bs-border-color, #dee2e6);
+    border-radius: var(--bs-border-radius, .375rem);
+  }
+  .obsidian-graph-toolbar .form-control {
+    max-width: 280px;
+    flex: 1 1 200px;
+  }
+  .obsidian-graph-toolbar .form-check {
+    margin-bottom: 0;
+  }
+  #obsidian-graph-status {
+    flex-basis: 100%;
+    font-size: .8125rem;
+    color: var(--bs-secondary-color, #6c757d);
+    min-height: 1.25rem;
+  }
+  .obsidian-graph-legend {
+    display: flex;
+    flex-wrap: wrap;
+    gap: .5rem;
+    margin-top: .75rem;
+    font-size: .8125rem;
+  }
+  .obsidian-graph-legend > span {
+    display: inline-flex;
+    align-items: center;
+    gap: .375rem;
+    padding: .25rem .55rem;
+    background: var(--bs-body-bg, #fff);
+    border: 1px solid var(--bs-border-color, #dee2e6);
+    border-radius: 999px;
+    color: var(--bs-body-color, #212529);
+  }
+  .obsidian-graph-legend .swatch {
+    display: inline-block;
+    width: .7rem;
+    height: .7rem;
+    border-radius: 50%;
+    box-shadow: 0 0 0 1px rgba(0, 0, 0, .15);
+  }
+  .obsidian-graph-legend .swatch-broken {
+    border: 1.5px dashed #dc3545;
+    background: transparent !important;
+    box-shadow: none;
+  }
+  .obsidian-graph-tips {
+    margin-top: .75rem;
+    padding: .625rem .75rem;
+    font-size: .8125rem;
+    color: var(--bs-secondary-color, #6c757d);
+    background: var(--bs-tertiary-bg, #f8f9fa);
+    border-left: 3px solid var(--bs-primary, #0d6efd);
+    border-radius: .25rem;
+  }
+  .obsidian-graph-tips strong {
+    color: var(--bs-body-color, #212529);
+  }
+</style>
+
+# Obsidian Graph View
+
+A live, force-directed map of every page on this site and every
+`[[wiki-link]]` between them. This is the rendered-site equivalent of
+Obsidian's local graph view — built from the same
+[`assets/data/wiki-index.json`]({{ "/assets/data/wiki-index.json" | relative_url }})
+that powers the [client-side resolver]({{ "/docs/obsidian/syntax-reference/" | relative_url }})
+and [backlinks panel]({{ "/docs/obsidian/syntax-reference/#backlinks-panel" | relative_url }}).
+
+<div id="obsidian-graph-stats" class="mb-2" aria-live="polite"></div>
+
+<div class="obsidian-graph-toolbar">
+  <input type="search"
+         class="form-control form-control-sm"
+         id="obsidian-graph-search"
+         placeholder="Filter nodes by title…"
+         aria-label="Filter graph nodes by title" />
+  <button type="button"
+          class="btn btn-outline-secondary btn-sm"
+          id="obsidian-graph-fit">
+    <i class="bi bi-arrows-fullscreen" aria-hidden="true"></i>
+    Reset view
+  </button>
+  <div class="form-check form-switch">
+    <input class="form-check-input"
+           type="checkbox"
+           role="switch"
+           id="obsidian-graph-orphans" />
+    <label class="form-check-label" for="obsidian-graph-orphans">
+      Show orphans
+    </label>
+  </div>
+  <span id="obsidian-graph-status" role="status"></span>
+</div>
+
+<div id="obsidian-graph" role="img" aria-label="Site knowledge graph"></div>
+
+<div class="obsidian-graph-legend" aria-label="Graph legend">
+  <span><span class="swatch" style="background:#0d6efd"></span>Posts</span>
+  <span><span class="swatch" style="background:#198754"></span>Docs</span>
+  <span><span class="swatch" style="background:#6f42c1"></span>Notes</span>
+  <span><span class="swatch" style="background:#d63384"></span>Notebooks</span>
+  <span><span class="swatch" style="background:#fd7e14"></span>Quickstart</span>
+  <span><span class="swatch" style="background:#6c757d"></span>Pages</span>
+  <span><span class="swatch swatch-broken"></span>Broken links</span>
+</div>
+
+<div class="obsidian-graph-tips">
+  <strong>Tips:</strong> click a node to open the page · ⌘/Ctrl-click to
+  open in a new tab · drag to reposition · scroll to zoom · hover to
+  highlight a node's neighborhood · type in the search box to filter.
+</div>
+
+## How it's built
+
+| Piece | File |
+| --- | --- |
+| Build-time index (nodes + outgoing edges) | [`assets/data/wiki-index.json`]({{ "/assets/data/wiki-index.json" | relative_url }}) (Liquid template at [`assets/data/wiki-index.json`](https://github.com/bamr87/zer0-mistakes/blob/main/assets/data/wiki-index.json)) |
+| Renderer | `assets/js/obsidian-graph.js` |
+| Layout engine | [cytoscape.js](https://js.cytoscape.org/) (loaded from CDN, only on this page) |
+
+Outgoing edges come from the same `[[…]]` syntax the resolver handles —
+unresolved targets show up as dashed red nodes so you can find dangling
+links at a glance. The graph is regenerated every Jekyll build; nothing
+runs client-side except cytoscape's force layout.
+
+<!-- Cytoscape.js (only loaded on this page). -->
+<script src="https://cdn.jsdelivr.net/npm/cytoscape@3.30.0/dist/cytoscape.min.js"
+        integrity="sha384-kpMsYllYzyaWU69Piok08rPNktpnjqAoDMdB00fjqUkEk3lkuUbSuwJ+oXrjvN6B"
+        crossorigin="anonymous"
+        defer></script>
+<script src="{{ '/assets/js/obsidian-graph.js' | relative_url }}" defer></script>
+
+## See also
+
+- [[Obsidian Vault Integration]]
+- [[Obsidian Syntax Reference]]
+- [[Obsidian Authoring Workflow]]
+- [[Getting Started with the Obsidian Vault]]
+- [[Obsidian Integration Troubleshooting]]

data/_plugins/obsidian_links.rb

@@ -416,10 +416,15 @@ module Jekyll
 
       def rewrite_document(doc)
         return unless index
+        return unless needs_rewrite?(doc.content)
 
         converter = Converter.new(nil, index, config)
         doc.content = converter.convert(doc.content, current_url: doc.url)
       end
+
+      def needs_rewrite?(content)
+        content.include?('[[') || content.include?('> [!') || content.match?(Converter::INLINE_TAG_RE)
+      end
     end
   end
 end

data/_plugins/preview_image_generator.rb

@@ -47,6 +47,9 @@ module Jekyll
 
     # Check if a document has a preview image defined
     def self.has_preview?(doc)
+      cached = cached_preview_entry(doc)
+      return cached['has_preview'] unless cached.nil?
+
       preview = doc.data['preview']
       return false if preview.nil? || preview.to_s.strip.empty?
       
@@ -95,6 +98,9 @@ module Jekyll
 
     # Get the preview image path for a document
     def self.preview_path(doc)
+      cached = cached_preview_entry(doc)
+      return cached['path'] unless cached.nil?
+
       preview = doc.data['preview']
       return nil if preview.nil? || preview.to_s.strip.empty?
       
@@ -113,36 +119,86 @@ module Jekyll
 
     # Get list of documents missing preview images
     def self.missing_previews(site)
+      build_index(site)['missing']
+    end
+
+    def self.build_index(site)
+      cached = site.data['preview_image_index']
+      return cached if cached
+
       config = self.config(site)
+      index = {}
       missing = []
-      
-      config['collections'].each do |collection_name|
+
+      preview_documents(site, config).each do |doc, collection_name|
+        key = preview_cache_key(doc)
+        next if index.key?(key)
+
+        preview = doc.data['preview']
+        normalized_path = nil
+        has_preview = false
+
+        if preview && !preview.to_s.strip.empty? && (preview.match?(/\.(png|jpe?g|gif|svg|webp)$/i) || preview.start_with?('http'))
+          normalized_path = preview.start_with?('http') ? preview : normalize_preview_path(preview, config)
+          has_preview = preview.start_with?('http') || preview_file_exists?(site, normalized_path, config)
+        end
+
+        index[key] = {
+          'has_preview' => has_preview,
+          'path' => normalized_path,
+          'collection' => collection_name
+        }
+
+        next if has_preview
+
+        missing << {
+          'path' => doc.relative_path,
+          'title' => doc.data['title'] || File.basename(doc.relative_path),
+          'collection' => collection_name
+        }
+      end
+
+      site.data['preview_image_index'] = {
+        'documents' => index,
+        'missing' => missing
+      }
+    end
+
+    def self.cached_preview_entry(doc)
+      return nil unless doc.respond_to?(:site) && doc.site && doc.site.data['preview_image_index']
+
+      doc.site.data['preview_image_index']['documents'][preview_cache_key(doc)]
+    end
+
+    def self.preview_documents(site, config)
+      docs = []
+      Array(config['collections']).each do |collection_name|
         collection = site.collections[collection_name]
         next unless collection
-        
-        collection.docs.each do |doc|
-          unless has_preview?(doc)
-            missing << {
-              'path' => doc.relative_path,
-              'title' => doc.data['title'] || File.basename(doc.relative_path),
-              'collection' => collection_name
-            }
-          end
-        end
+
+        collection.docs.each { |doc| docs << [doc, collection_name] }
       end
-      
-      # Also check posts (which are special in Jekyll)
-      site.posts.docs.each do |doc|
-        unless has_preview?(doc)
-          missing << {
-            'path' => doc.relative_path,
-            'title' => doc.data['title'] || File.basename(doc.relative_path),
-            'collection' => 'posts'
-          }
-        end
+
+      site.posts.docs.each { |doc| docs << [doc, 'posts'] } if site.respond_to?(:posts) && site.posts
+      docs
+    end
+
+    def self.preview_cache_key(doc)
+      doc.respond_to?(:relative_path) ? doc.relative_path : doc.path
+    end
+
+    def self.preview_file_exists?(site, normalized_preview, config)
+      candidates = []
+      if normalized_preview.start_with?('/')
+        candidates << File.join(site.source, normalized_preview.sub(/^\//, ''))
+        candidates << File.join(site.source, 'assets', normalized_preview.sub(/^\//, ''))
+      else
+        candidates << File.join(site.source, 'assets', normalized_preview)
+        candidates << File.join(site.source, normalized_preview)
+        candidates << File.join(site.source, config['output_dir'], normalized_preview)
       end
-      
-      missing.uniq { |m| m['path'] }
+
+      candidates.any? { |path| File.exist?(path) }
     end
 
     # Generate a preview image filename from document
@@ -264,7 +320,8 @@ module Jekyll
       return unless config['enabled']
       
       # Store missing previews in site data for access in templates
-      site.data['preview_images_missing'] = PreviewImageGenerator.missing_previews(site)
+      preview_index = PreviewImageGenerator.build_index(site)
+      site.data['preview_images_missing'] = preview_index['missing']
       site.data['preview_images_config'] = config
       
       # Log status

data/assets/data/wiki-index.json

@@ -36,14 +36,38 @@ sitemap: false
   "entries": [
     {%- for doc in all_docs -%}
       {%- assign basename = doc.path | split: "/" | last | replace: ".md", "" | replace: ".markdown", "" | replace: ".html", "" -%}
-      {%- assign body = doc.content | default: "" | strip_html -%}
+      {%- assign body_source = doc.content | default: "" -%}
+      {%- assign body_without_fences = "" -%}
+      {%- assign fence_parts = body_source | split: "```" -%}
+      {%- for fence_part in fence_parts -%}
+        {%- assign fence_mod = forloop.index0 | modulo: 2 -%}
+        {%- if fence_mod == 0 -%}
+          {%- assign body_without_fences = body_without_fences | append: fence_part -%}
+        {%- endif -%}
+      {%- endfor -%}
+      {%- assign body_without_code = "" -%}
+      {%- assign inline_code_parts = body_without_fences | split: "`" -%}
+      {%- for inline_code_part in inline_code_parts -%}
+        {%- assign inline_code_mod = forloop.index0 | modulo: 2 -%}
+        {%- if inline_code_mod == 0 -%}
+          {%- assign body_without_code = body_without_code | append: inline_code_part -%}
+        {%- endif -%}
+      {%- endfor -%}
+      {%- assign body = body_without_code | strip_html -%}
       {%- assign body_excerpt = body | strip_newlines | truncate: 240 -%}
+      {%- assign aliases = "" | split: "," -%}
+      {%- if doc.aliases -%}
+        {%- assign aliases_blob = doc.aliases | join: "||" -%}
+        {%- assign aliases = aliases_blob | split: "||" -%}
+      {%- endif -%}
       {%- comment -%}
         Extract outgoing wiki-link targets so the graph view
         (assets/js/obsidian-graph.js) can render edges without re-parsing
-        every page client-side. We mask `![[…]]` embeds first so they don't
-        also get split as `[[…]]`, then split on `[[`, take everything
-        before `]]`, and strip the optional `|alias` and `#anchor` parts.
+        every page client-side. Fenced and inline code are removed first so
+        Bash `[[ ... ]]` tests and literal examples don't become graph edges.
+        We mask `![[…]]` embeds so they don't also get split as `[[…]]`, then
+        strip optional `|alias` and `#anchor` / `^block` parts. Operator-heavy
+        targets are discarded as table examples rather than Obsidian page names.
       {%- endcomment -%}
       {%- assign masked = body | replace: "![[", "@@OBSEMBED@@" -%}
       {%- assign chunks = masked | split: "[[" -%}
@@ -52,7 +76,21 @@ sitemap: false
         {%- assign target_raw = chunk | split: "]]" | first -%}
         {%- if target_raw and target_raw != "" -%}
           {%- assign target = target_raw | split: "|" | first | split: "#" | first | split: "^" | first | strip | downcase -%}
-          {%- if target != "" and target.size < 200 -%}
+          {%- assign target_is_code = false -%}
+          {%- assign first_char = target | slice: 0 -%}
+          {%- if target contains "$" or target contains "==" or target contains "!=" or target contains "=~" -%}
+            {%- assign target_is_code = true -%}
+          {%- endif -%}
+          {%- if target contains "&&" or target contains "||" or target contains "&amp;&amp;" or target contains "&lt;" or target contains "&gt;" -%}
+            {%- assign target_is_code = true -%}
+          {%- endif -%}
+          {%- if target contains " -eq " or target contains " -ne " or target contains " -lt " or target contains " -le " or target contains " -gt " or target contains " -ge " -%}
+            {%- assign target_is_code = true -%}
+          {%- endif -%}
+          {%- if first_char == "-" or target contains "{" or target contains "}" or target contains "(" or target contains ")" or target contains '"' or target contains "'" -%}
+            {%- assign target_is_code = true -%}
+          {%- endif -%}
+          {%- if target != "" and target.size < 200 and target_is_code == false -%}
             {%- assign outgoing = outgoing | push: target -%}
           {%- endif -%}
         {%- endif -%}
@@ -65,7 +103,7 @@ sitemap: false
         "collection": {{ doc.collection | default: nil | jsonify }},
         "tags": {{ doc.tags | default: empty | jsonify }},
         "categories": {{ doc.categories | default: empty | jsonify }},
-        "aliases": {{ doc.aliases | default: empty | jsonify }},
+        "aliases": {{ aliases | jsonify }},
         "outgoing": {{ outgoing | jsonify }},
         "excerpt": {{ body_excerpt | jsonify }}
       }{% unless forloop.last %},{% endunless %}

data/assets/js/obsidian-graph.js

@@ -184,7 +184,6 @@
     var cy = window.cytoscape({
       container: container,
       elements: elements,
-      wheelSensitivity: 0.2,
       minZoom: 0.1,
       maxZoom: 4,
       style: [

data/assets/js/obsidian-local-graph.js

@@ -277,7 +277,6 @@
     var cy = window.cytoscape({
       container: container,
       elements: elements,
-      wheelSensitivity: 0.2,
       minZoom: 0.3,
       maxZoom: 3,
       autoungrabify: false,

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: jekyll-theme-zer0
 version: !ruby/object:Gem::Version
-  version: 1.4.0
+  version: 1.4.1
 platform: ruby
 authors:
 - Amr Abdel
 autorequire:
 bindir: bin
 cert_chain: []
-date: 2026-04-25 00:00:00.000000000 Z
+date: 2026-04-28 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: jekyll
@@ -169,6 +169,7 @@ files:
 - _includes/navigation/sidebar-folders.html
 - _includes/navigation/sidebar-left.html
 - _includes/navigation/sidebar-right.html
+- _includes/obsidian/full-graph.html
 - _includes/search-data.json
 - _includes/setup/wizard.html
 - _includes/stats/README.md