isotree 0.4.0 → 0.4.1

checksums.yaml

@@ -1,7 +1,7 @@
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data/CHANGELOG.md

@@ -1,3 +1,7 @@
+## 0.4.1 (2025-10-26)
+
+- Fixed error with Rice 4.7
+
 ## 0.4.0 (2024-06-11)
 
 - Updated IsoTree to 0.6.1

data/README.md

@@ -157,12 +157,6 @@ Get the average isolation depth
 model.predict(data, output: "avg_depth")
 ```
 
-## Upgrading
-
-### 0.3.0
-
-This version uses IsoTree’s new serialization format. Exported models must be recreated.
-
 ## History
 
 View the [changelog](https://github.com/ankane/isotree-ruby/blob/master/CHANGELOG.md)

data/ext/isotree/ext.cpp

@@ -2,6 +2,8 @@
 #include <cmath>
 #include <fstream>
 #include <iostream>
+#include <string>
+#include <vector>
 
 // isotree
 #include <isotree.hpp>
@@ -11,21 +13,15 @@
 
 using Rice::Array;
 using Rice::Hash;
-using Rice::Module;
 using Rice::Object;
 using Rice::String;
 using Rice::Symbol;
-using Rice::define_class_under;
-using Rice::define_module;
 
-namespace Rice::detail
-{
+namespace Rice::detail {
   template<>
-  class From_Ruby<NewCategAction>
-  {
+  class From_Ruby<NewCategAction> {
   public:
-    NewCategAction convert(VALUE x)
-    {
+    NewCategAction convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "weighted" || value == "impute") return Weighted;
       if (value == "smallest") return Smallest;
@@ -35,11 +31,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<MissingAction>
-  {
+  class From_Ruby<MissingAction> {
   public:
-    MissingAction convert(VALUE x)
-    {
+    MissingAction convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "divide") return Divide;
       if (value == "impute") return Impute;
@@ -49,11 +43,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<CategSplit>
-  {
+  class From_Ruby<CategSplit> {
   public:
-    CategSplit convert(VALUE x)
-    {
+    CategSplit convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "subset") return SubSet;
       if (value == "single_categ") return SingleCateg;
@@ -62,11 +54,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<CoefType>
-  {
+  class From_Ruby<CoefType> {
   public:
-    CoefType convert(VALUE x)
-    {
+    CoefType convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "uniform") return Uniform;
       if (value == "normal") return Normal;
@@ -75,11 +65,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<UseDepthImp>
-  {
+  class From_Ruby<UseDepthImp> {
   public:
-    UseDepthImp convert(VALUE x)
-    {
+    UseDepthImp convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "lower") return Lower;
       if (value == "higher") return Higher;
@@ -89,11 +77,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<WeighImpRows>
-  {
+  class From_Ruby<WeighImpRows> {
   public:
-    WeighImpRows convert(VALUE x)
-    {
+    WeighImpRows convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "inverse") return Inverse;
       if (value == "prop") return Prop;
@@ -103,11 +89,9 @@ namespace Rice::detail
   };
 
   template<>
-  class From_Ruby<ScoringMetric>
-  {
+  class From_Ruby<ScoringMetric> {
   public:
-    ScoringMetric convert(VALUE x)
-    {
+    ScoringMetric convert(VALUE x) {
       auto value = Object(x).to_s().str();
       if (value == "depth") return Depth;
       if (value == "adj_depth") return AdjDepth;
@@ -119,15 +103,14 @@ namespace Rice::detail
       throw std::runtime_error("Unknown scoring metric: " + value);
     }
   };
-}
+} // namespace Rice::detail
 
 extern "C"
-void Init_ext()
-{
-  Module rb_mIsoTree = define_module("IsoTree");
+void Init_ext() {
+  Rice::Module rb_mIsoTree = Rice::define_module("IsoTree");
 
-  Module rb_mExt = define_module_under(rb_mIsoTree, "Ext");
-  define_class_under<ExtIsoForest>(rb_mExt, "ExtIsoForest");
+  Rice::Module rb_mExt = Rice::define_module_under(rb_mIsoTree, "Ext");
+  Rice::define_class_under<ExtIsoForest>(rb_mExt, "ExtIsoForest");
 
   rb_mExt
     .define_singleton_function(
@@ -325,7 +308,7 @@ void Init_ext()
 
         Array ret;
         for (size_t i = 0; i < outlier_scores.size(); i++) {
-          ret.push(outlier_scores[i]);
+          ret.push(outlier_scores[i], false);
         }
         return ret;
       })
@@ -411,8 +394,8 @@ void Init_ext()
         deserialize_combined(file, &model, &model_ext, &imputer, &indexer, optional_metadata);
         file.close();
 
-        ret.push(Object(Rice::detail::To_Ruby<ExtIsoForest>().convert(model_ext)));
-        ret.push(String(std::string(optional_metadata, size_metadata)));
+        ret.push(Object(Rice::detail::To_Ruby<ExtIsoForest>().convert(model_ext)), false);
+        ret.push(String(std::string(optional_metadata, size_metadata)), false);
 
         free(optional_metadata);
 

data/lib/isotree/isolation_forest.rb

@@ -1,24 +1,44 @@
 module IsoTree
   class IsolationForest
     def initialize(
-      sample_size: "auto", ntrees: 500, ndim: 3, ntry: 1,
+      sample_size: "auto",
+      ntrees: 500,
+      ndim: 3,
+      ntry: 1,
       # categ_cols: nil,
-      max_depth: "auto", ncols_per_tree: nil,
-      prob_pick_pooled_gain: 0.0, prob_pick_avg_gain: 0.0,
-      prob_pick_full_gain: 0.0, prob_pick_dens: 0.0,
-      prob_pick_col_by_range: 0.0, prob_pick_col_by_var: 0.0, prob_pick_col_by_kurt: 0.0,
-      min_gain: 0.0, missing_action: "auto", new_categ_action: "auto",
-      categ_split_type: "auto", all_perm: false, coef_by_prop: false,
+      max_depth: "auto",
+      ncols_per_tree: nil,
+      prob_pick_pooled_gain: 0.0,
+      prob_pick_avg_gain: 0.0,
+      prob_pick_full_gain: 0.0,
+      prob_pick_dens: 0.0,
+      prob_pick_col_by_range: 0.0,
+      prob_pick_col_by_var: 0.0,
+      prob_pick_col_by_kurt: 0.0,
+      min_gain: 0.0,
+      missing_action: "auto",
+      new_categ_action: "auto",
+      categ_split_type: "auto",
+      all_perm: false,
+      coef_by_prop: false,
       # recode_categ: false,
       weights_as_sample_prob: true,
-      sample_with_replacement: false, penalize_range: false, standardize_data: true,
-      scoring_metric: "depth", fast_bratio: true,
-      weigh_by_kurtosis: false, coefs: "uniform", assume_full_distr: true,
+      sample_with_replacement: false,
+      penalize_range: false,
+      standardize_data: true,
+      scoring_metric: "depth",
+      fast_bratio: true,
+      weigh_by_kurtosis: false,
+      coefs: "uniform",
+      assume_full_distr: true,
       # build_imputer: false,
-      min_imp_obs: 3, depth_imp: "higher",
-      weigh_imp_rows: "inverse", random_seed: 1, use_long_double: false, nthreads: -1
+      min_imp_obs: 3,
+      depth_imp: "higher",
+      weigh_imp_rows: "inverse",
+      random_seed: 1,
+      use_long_double: false,
+      nthreads: -1
     )
-
       @sample_size = sample_size
       @ntrees = ntrees
       @ndim = ndim

data/lib/isotree/version.rb

@@ -1,3 +1,3 @@
 module IsoTree
-  VERSION = "0.4.0"
+  VERSION = "0.4.1"
 end

metadata

@@ -1,14 +1,13 @@
 --- !ruby/object:Gem::Specification
 name: isotree
 version: !ruby/object:Gem::Version
-  version: 0.4.0
+  version: 0.4.1
 platform: ruby
 authors:
 - Andrew Kane
-autorequire:
 bindir: bin
 cert_chain: []
-date: 2024-06-12 00:00:00.000000000 Z
+date: 1980-01-02 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rice
@@ -16,15 +15,14 @@ dependencies:
     requirements:
     - - ">="
       - !ruby/object:Gem::Version
-        version: '4.3'
+        version: '4.7'
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
     requirements:
     - - ">="
       - !ruby/object:Gem::Version
-        version: '4.3'
-description:
+        version: '4.7'
 email: andrew@ankane.org
 executables: []
 extensions:
@@ -88,7 +86,6 @@ homepage: https://github.com/ankane/isotree-ruby
 licenses:
 - BSD-2-Clause
 metadata: {}
-post_install_message:
 rdoc_options: []
 require_paths:
 - lib
@@ -103,8 +100,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
-rubygems_version: 3.5.9
-signing_key:
+rubygems_version: 3.6.9
 specification_version: 4
 summary: Outlier/anomaly detection for Ruby using Isolation Forest
 test_files: []