isi 1.1.5 → 1.2.0

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Files changed (30) hide show
  1. data/README +22 -13
  2. data/Rakefile +1 -2
  3. data/bin/isi2bibtex +0 -0
  4. data/bin/isi2html +81 -0
  5. data/bin/isi2kakenhi +2 -2
  6. data/bin/isi2tohoku +0 -0
  7. data/html/classes/ARGF.html +37 -25
  8. data/html/classes/ARGF.src/M000005.html +44 -47
  9. data/html/classes/ISI_record.html +70 -40
  10. data/html/classes/ISI_record.src/M000002.html +11 -37
  11. data/html/classes/ISI_record.src/M000003.html +35 -30
  12. data/html/classes/ISI_record.src/M000004.html +32 -0
  13. data/html/classes/String.html +48 -32
  14. data/html/classes/String.src/{M000004.html → M000001.html} +5 -8
  15. data/html/created.rid +1 -1
  16. data/html/files/README.html +49 -48
  17. data/html/files/lib/isi_rb.html +28 -31
  18. data/html/files/lib/journaltitleabbreviation_rb.html +15 -25
  19. data/html/fr_class_index.html +12 -12
  20. data/html/fr_file_index.html +12 -12
  21. data/html/fr_method_index.html +18 -16
  22. data/html/index.html +5 -8
  23. data/html/rdoc-style.css +210 -119
  24. data/isi.gemspec +3 -3
  25. data/lib/isi.rb +17 -9
  26. data/publication.css +36 -0
  27. data/tests/isi_test.rb +3 -3
  28. metadata +68 -59
  29. data/bin/isi2timescited +0 -40
  30. data/html/classes/ISI_record.src/M000001.html +0 -19
data/README CHANGED
@@ -4,10 +4,9 @@
4
4
  isi is an ISI Export Format to BibTeX Format converter written in
5
5
  Ruby script language. You can use isi as a library, too.
6
6
 
7
- ISI Web of Science (go to http://isiknowledge.com , click [Select a Database] tab,
8
- then click "Web of Science (R)") provides their bibliographic information in
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- ISI Export Format. You can get the tagged Marked List in Web of Science by
10
- clicking the [SAVE TO FILE] button.
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+ ISI Web of Science (http://isiknowledge.com) provides their bibliographic
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+ information in ISI Export Format. You can get the tagged Marked List in
9
+ Web of Science by clicking the [SAVE TO FILE] button.
11
10
 
12
11
  == Where is the homepage of isi?
13
12
  http://isi-rb.rubyforge.org
@@ -38,7 +37,9 @@ lib/journaltitleabbreviation.rb (journaltitleabbreviation-X.Y.Z.rb)
38
37
  into your working directory which contains your saved "Marked List",
39
38
  e.g. savedrecs.txt.
40
39
  $ cp lib/isi.rb lib/journaltitleabbreviation.rb ~/your/working/directory/
41
- ($ cp isi-X.Y.Z.rb journaltitleabbreviation-X.Y.Z.rb ~/your/working/directory/isi.rb)
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+ ($ cp isi-X.Y.Z.rb ~/your/working/directory/isi.rb)
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+ $ cp lib/journaltitleabbreviation.rb ~/your/working/directory/
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+ ($ cp journaltitleabbreviation-X.Y.Z.rb ~/your/working/directory/journaltitleabbreviation.rb)
42
43
  $ cd ~/your/working/directory/
43
44
  $ ruby isi.rb savedrecs1.txt savedrecs2.txt
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  $ ruby isi.rb < savedrecs.txt > savedrecs.bib
@@ -65,13 +66,9 @@ For KakenhiLaTeX http://osksn2.hep.sci.osaka-u.ac.jp/~taku/kakenhiLaTeX/
65
66
  For the database of "Academic Research Staff at Tohoku University" http://db.tohoku.ac.jp/whois/TunvTopE.html
66
67
  $ isi2tohoku --help
67
68
  $ isi2tohoku --id 12345678 --name 'Example Name' savedrecs.txt
68
- For summing the number of times cited
69
- $ isi2timescited MyAllPapers.isi
70
- 1997 10
71
- :
72
- 2007 0
73
- total 88
74
- WARNING: isi2timescited is OBSOLETE. Try the [CITATION REPORT] button in the right column of ISI Web of Science.
69
+ To convert ISI Export Format to HTML
70
+ $ isi2html --help
71
+ $ isi2html --full-name='Hideki Yukawa' --name-regexp='(H\. Yukawa|Hideki Yukawa)' savedrecs.txt > index.html
75
72
  === You can use isi as a library.
76
73
  Here is an example:
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  #!/usr/bin/env ruby
@@ -131,15 +128,25 @@ See http://isibasic.com/help/helpprn.html .
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128
  AP: Article number of new APS journals (in ISI Web of Knowledge, 2008-)
132
129
  AR: Article number of new APS journals
133
130
  AU: Authors
131
+ BN: ISBN
134
132
  BP: Beginning page
135
133
  C1: Research addresses
134
+ CA: Group authors
135
+ CL: Conference location
136
136
  CR: Cited references
137
+ CT: Conference title
138
+ CY: Conference Date
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139
  DE: Original keywords
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140
  DI: DOI
139
141
  DT: Document type
142
+ ED: Editors
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+ EM: E-mail address
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144
  EP: Ending page
141
145
  ER: end of a record
142
- GA: ISI document delivery number
146
+ FN: File name
147
+ FU: Funding agency and grant number
148
+ FX: Funding text
149
+ GA: IDS number (ISI original)
143
150
  ID: New keywords given by ISI
144
151
  IS: issue
145
152
  J9: 29-character journal title abbreviation
@@ -147,6 +154,7 @@ See http://isibasic.com/help/helpprn.html .
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154
  LA: Language
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155
  NR: Cited reference count
149
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  PD: Publication date e.g. "JUN 8" or "JUL"
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+ PA: Publisher Address
150
158
  PG: the number of pages
151
159
  PI: Publisher city
152
160
  PN: Part number
@@ -158,6 +166,7 @@ See http://isibasic.com/help/helpprn.html .
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  SI: Special issue
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167
  SN: ISSN
160
168
  SO: journal title, in full
169
+ SP: Conference Sponsors
161
170
  SU: Supplement
162
171
  TC: Times cited
163
172
  TI: Title
data/Rakefile CHANGED
@@ -1,6 +1,6 @@
1
1
  #! /usr/bin/env rake
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  # -*-Ruby-*-
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- # Time-stamp: <2008-02-20 10:31:23 takeshi>
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+ # Time-stamp: <2009-04-21 20:45:04 takeshi>
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4
  # Author: Takeshi Nishimatsu
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5
  ##
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6
  $LOAD_PATH.unshift('lib')
@@ -12,7 +12,6 @@ require 'rake/rdoctask'
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12
  require 'rake/clean'
13
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  require 'rake/contrib/rubyforgepublisher'
14
14
  require 'isi.rb'
15
- require 'archive/tar/minitar'
16
15
  require 'zlib'
17
16
 
18
17
  spec = eval(File.read("isi.gemspec"))
data/bin/isi2bibtex CHANGED
File without changes
data/bin/isi2html ADDED
@@ -0,0 +1,81 @@
1
+ #!/usr/bin/env ruby
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+ # isi2html -*-Ruby-*-
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+ # Time-stamp: <2009-04-21 21:08:56 takeshi>
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+ # Description: isi2html is an ISI Export Format to HTML Format converter.
5
+ # Project homepage: http://isi-rb.rubyforge.org/
6
+ # Usage: isi2html --name-regexp='(H\. Yukawa|Hideki Yukawa)' savedrecs.txt > index.html
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+ # Author: Takeshi Nishimatsu
8
+ ##
9
+ require "isi"
10
+ require "optparse"
11
+
12
+ class ISI_record
13
+ def to_html(name_regexp)
14
+ " <li>
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+ #{comma_and_separated_authors.sub(name_regexp,'<u>\1</u>')}:
16
+ \"#{@hash['TI']}\",
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+ #{ji2journal} <b>#{@hash['VL']}</b>, #{pages} (#{@hash['PY']})#{', ' + doi_html_link if doi_html_link},
18
+ <i>N</i><sub>tc</sub>=#{@hash['TC']}.
19
+ </li>\n"
20
+ end
21
+ end
22
+
23
+ name_regexp=/(T\. Nishimatsu|Takeshi Nishimatsu)/
24
+ full_name="Takeshi Nshimatsu"
25
+
26
+ opts = OptionParser.new
27
+ def opts.usage
28
+ return to_s.sub(/options/,'options] [filename(s)')
29
+ end
30
+ opts.on("-n YOUR_NAME_REGEXP","--name-regexp YOUR_NAME_REGEXP",
31
+ "Regular expression of your name. Example: --name-regexp='(H\\. Yukawa|Hideki Yukawa)'"){|v| name_regexp=Regexp.new(v)}
32
+ opts.on("-f YOUR_FULL_NAME","--full-name YOUR_FULL_NAME",
33
+ "Your full name for the title: --full-name='Hideki Yukawa'"){|v| full_name=v}
34
+ opts.on_tail("-h", "--help", "Show this message"){puts opts.usage; exit}
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+
36
+ opts.parse!(ARGV)
37
+
38
+
39
+ print "<?xml version=\"1.0\" encoding=\"utf-8\"?>
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+ <!DOCTYPE html PUBLIC \"-//W3C//DTD XHTML 1.0 Transitional//EN\"
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+ \"http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd\">
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+
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+ <html xmlns=\"http://www.w3.org/1999/xhtml\" xml:lang=\"en\" lang=\"en\">
44
+ <head>
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+ <meta http-equiv=\"Content-Type\" content=\"text/html; charset=utf-8\" />
46
+ <title>#{full_name} Publication List</title>
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+ <meta name=\"author\" content=\"#{full_name}\" />
48
+ <meta name=\"copyright\" content=\"Copyright &#169; 2008 #{full_name}\" />
49
+ <link rel=\"stylesheet\" href=\"publication.css\" type=\"text/css\" />
50
+ <link rel=\"shortcut icon\" href=\"favicon.ico\" />
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+
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+ </head>
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+ <body>
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+ <h1 id=\"TITLE\">#{full_name} Publication List</h1>
55
+
56
+ <p>
57
+ <i>N</i><sub>tc</sub>: The number of times cited before #{Time.now.strftime("%B %Y")}.
58
+ </p>
59
+
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+ <ol>
61
+ "
62
+
63
+ while rec = ARGF.read_an_ISI_record
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+ print rec.to_html(name_regexp)
65
+ end
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+
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+ print "</ol>
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+
69
+ <hr />
70
+
71
+ <p>
72
+ This publication list was semi-automatically generated by <a href=\"http://isi-rb.rubyforge.org/\">isi2html</a> from a searched result in <a href=\"http://isiknowledge.com/\">Web of Science</a>.
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+ </p>
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+
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+ </body>
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+ </html>
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+ "
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+
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+ #Local variables:
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+ # compile-command: "ruby -r rubygems -I ../lib isi2html ~/references/isi/TakeshiNishimatsuAll-with-DOI.isi > ../examples/publication.html"
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+ #End:
data/bin/isi2kakenhi CHANGED
@@ -1,6 +1,6 @@
1
1
  #!/usr/bin/env ruby
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2
  # isi2kakenhi -*-Ruby-*-
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- # Time-stamp: <2007-10-11 20:46:11 takeshi>
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+ # Time-stamp: <2008-09-14 16:05:57 takeshi>
4
4
  # Description: isi2kakenhi is an ISI Export Format to KakenhiLaTeX Format converter.
5
5
  # Project homepage: http://isi-rb.rubyforge.org/
6
6
  # KakenhiLaTeX homepage: http://osksn2.hep.sci.osaka-u.ac.jp/~taku/kakenhiLaTeX/
@@ -24,7 +24,7 @@ opts = OptionParser.new
24
24
  def opts.usage
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25
  return to_s.sub(/options/,'options] [filename(s)')
26
26
  end
27
- opts.on("-n YOUR_NAME","--name-regexp YOUR_NAME_REGEXP",
27
+ opts.on("-n YOUR_NAME_REGEXP","--name-regexp YOUR_NAME_REGEXP",
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28
  "Regular expression of your name. Example: --name-regexp='(H\\. Yukawa|Hideki Yukawa)'"){|v| name_regexp=Regexp.new(v)}
29
29
  opts.on_tail("-h", "--help", "Show this message"){puts opts.usage; exit}
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30
 
data/bin/isi2tohoku CHANGED
File without changes
data/html/classes/ARGF.html CHANGED
@@ -1,12 +1,9 @@
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- <?xml version="1.0" encoding="iso-8859-1"?>
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- <!DOCTYPE html
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- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
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- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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-
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+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
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+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
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3
  <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
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4
  <head>
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- <title>Module: ARGF</title>
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- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
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+ <title>Module: ARGF [isi]</title>
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+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
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  <meta http-equiv="Content-Script-Type" content="text/javascript" />
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8
  <link rel="stylesheet" href=".././rdoc-style.css" type="text/css" media="screen" />
12
9
  <script type="text/javascript">
@@ -25,7 +22,7 @@
25
22
  return false;
26
23
 
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  elemStyle = elem.style;
28
-
25
+
29
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  if ( elemStyle.display != "block" ) {
30
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  elemStyle.display = "block"
31
28
  } else {
@@ -34,10 +31,10 @@
34
31
 
35
32
  return true;
36
33
  }
37
-
34
+
38
35
  // Make codeblocks hidden by default
39
- document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
40
-
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+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }<\/style>" )
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+
41
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  // ]]>
42
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  </script>
43
40
 
@@ -45,7 +42,6 @@
45
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  <body>
46
43
 
47
44
 
48
-
49
45
  <div id="classHeader">
50
46
  <table class="header-table">
51
47
  <tr class="top-aligned-row">
@@ -55,34 +51,44 @@
55
51
  <tr class="top-aligned-row">
56
52
  <td><strong>In:</strong></td>
57
53
  <td>
54
+
55
+
56
+ <a href="../files/lib/isi_rb.html">
57
+
58
+ lib/isi.rb
59
+
60
+ </a>
61
+
62
+
63
+ <br />
64
+
58
65
  </td>
59
66
  </tr>
60
67
 
68
+
61
69
  </table>
62
70
  </div>
63
71
  <!-- banner header -->
64
72
 
65
73
  <div id="bodyContent">
66
74
 
67
-
68
-
69
75
  <div id="contextContent">
70
76
 
71
-
72
-
73
77
  </div>
74
78
 
79
+
75
80
  <div id="method-list">
76
81
  <h3 class="section-bar">Methods</h3>
77
82
 
78
83
  <div class="name-list">
79
- <a href="#M000005">read_an_ISI_record</a>&nbsp;&nbsp;
84
+
85
+ <a href="#M000005">read_an_ISI_record</a>&nbsp;&nbsp;
86
+
80
87
  </div>
81
88
  </div>
82
89
 
83
90
  </div>
84
91
 
85
-
86
92
  <!-- if includes -->
87
93
 
88
94
  <div id="section">
@@ -90,38 +96,44 @@
90
96
 
91
97
 
92
98
 
93
-
94
-
95
-
96
-
97
99
  <!-- if method_list -->
100
+
98
101
  <div id="methods">
102
+
99
103
  <h3 class="section-bar">Public Class methods</h3>
100
104
 
105
+
101
106
  <div id="method-M000005" class="method-detail">
102
107
  <a name="M000005"></a>
103
108
 
104
109
  <div class="method-heading">
110
+
105
111
  <a href="ARGF.src/M000005.html" target="Code" class="method-signature"
106
112
  onclick="popupCode('ARGF.src/M000005.html');return false;">
113
+
107
114
  <span class="method-name">read_an_ISI_record</span><span class="method-args">()</span>
115
+
108
116
  </a>
117
+
109
118
  </div>
110
-
119
+
111
120
  <div class="method-description">
121
+
112
122
  </div>
113
123
  </div>
114
124
 
115
125
 
126
+
116
127
  </div>
117
128
 
118
129
 
119
- </div>
120
130
 
121
131
 
132
+ </div>
133
+
122
134
  <div id="validator-badges">
123
135
  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
124
136
  </div>
125
137
 
126
138
  </body>
127
- </html>
139
+ </html>
data/html/classes/ARGF.src/M000005.html CHANGED
@@ -1,53 +1,50 @@
1
- <?xml version="1.0" encoding="iso-8859-1"?>
2
- <!DOCTYPE html
3
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
4
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
5
-
6
- <html>
1
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
2
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
3
+ <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
7
4
  <head>
8
5
  <title>read_an_ISI_record (ARGF)</title>
9
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
6
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
10
7
  <link rel="stylesheet" href="../.././rdoc-style.css" type="text/css" media="screen" />
11
8
  </head>
12
9
  <body class="standalone-code">
13
- <pre> <span class="ruby-comment cmt"># File lib/isi.rb, line 200</span>
14
- 200: <span class="ruby-keyword kw">def</span> <span class="ruby-constant">ARGF</span>.<span class="ruby-identifier">read_an_ISI_record</span>
15
- 201: <span class="ruby-comment cmt"># singleton method (instance method associated only with ARGF)</span>
16
- 202: <span class="ruby-identifier">hash</span> = {}
17
- 203: <span class="ruby-keyword kw">while</span> <span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>
18
- 204: <span class="ruby-comment cmt">#===== a few special cases</span>
19
- 205: <span class="ruby-keyword kw">return</span> <span class="ruby-constant">ISI_record</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">hash</span>) <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ER/</span>
20
- 206: <span class="ruby-keyword kw">next</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^(EF|FN|VR)/</span> <span class="ruby-comment cmt"># ignore file-unique tags</span>
21
- 207: <span class="ruby-keyword kw">next</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^\s*$/</span> <span class="ruby-comment cmt"># ignore blank lines</span>
22
- 208: <span class="ruby-keyword kw">while</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/\!$/</span>
23
- 209: <span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp!</span>.<span class="ruby-identifier">chop!</span> <span class="ruby-comment cmt"># continued to next line if the line ends with &quot;!&quot;</span>
24
- 210: <span class="ruby-identifier">line</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">gets</span>
25
- 211: <span class="ruby-keyword kw">end</span>
26
- 212: <span class="ruby-comment cmt">#===== Normal tags</span>
27
- 213: <span class="ruby-keyword kw">case</span> <span class="ruby-identifier">line</span>
28
- 214: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(AU|AF|CR) /</span>
29
- 215: <span class="ruby-identifier">tag</span> = <span class="ruby-identifier">$1</span>
30
- 216: <span class="ruby-identifier">authors</span> = [<span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^(AU|AF|CR) /</span>,<span class="ruby-value str">''</span>)]
31
- 217: <span class="ruby-keyword kw">while</span> (<span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>) <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ /</span>
32
- 218: <span class="ruby-identifier">authors</span>.<span class="ruby-identifier">push</span>(<span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^\s+/</span>,<span class="ruby-value str">''</span>))
33
- 219: <span class="ruby-keyword kw">end</span>
34
- 220: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">tag</span>] = <span class="ruby-identifier">authors</span>
35
- 221: <span class="ruby-keyword kw">redo</span>
36
- 222: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(NR|PG|PY|TC) (.*)$/</span>
37
- 223: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">$1</span>] = <span class="ruby-identifier">$2</span>.<span class="ruby-identifier">to_i</span>
38
- 224: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(TI|AB|DE|ID|SO|PT|JI|BP|EP|AP|AR|PD|VL|IS|GA|PI|PU|PN|PA|J9|UT|DT|C1|RP|SI|SE|SN|SU|LA|DI|SC) (.*)$/</span>
39
- 225: <span class="ruby-identifier">tag</span> = <span class="ruby-identifier">$1</span>
40
- 226: <span class="ruby-identifier">str</span> = <span class="ruby-identifier">$2</span>
41
- 227: <span class="ruby-keyword kw">while</span> (<span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>) <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ /</span>
42
- 228: <span class="ruby-identifier">str</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^ /</span>,<span class="ruby-value str">''</span>)
43
- 229: <span class="ruby-keyword kw">end</span>
44
- 230: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">tag</span>] = <span class="ruby-identifier">str</span>
45
- 231: <span class="ruby-keyword kw">redo</span>
46
- 232: <span class="ruby-keyword kw">else</span>
47
- 233: <span class="ruby-constant">STDERR</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-node">&quot;#{$FILENAME}:#{file.lineno}: Unknown tag: #{line}&quot;</span>
48
- 234: <span class="ruby-keyword kw">end</span>
49
- 235: <span class="ruby-keyword kw">end</span>
50
- 236: <span class="ruby-keyword kw">return</span> <span class="ruby-keyword kw">nil</span>
51
- 237: <span class="ruby-keyword kw">end</span></pre>
10
+ <pre> <span class="ruby-comment cmt"># File lib/isi.rb, line 208</span>
11
+ 208: <span class="ruby-keyword kw">def</span> <span class="ruby-constant">ARGF</span>.<span class="ruby-identifier">read_an_ISI_record</span>
12
+ 209: <span class="ruby-comment cmt"># singleton method (instance method associated only with ARGF)</span>
13
+ 210: <span class="ruby-identifier">hash</span> = {}
14
+ 211: <span class="ruby-keyword kw">while</span> <span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>
15
+ 212: <span class="ruby-comment cmt">#===== a few special cases</span>
16
+ 213: <span class="ruby-keyword kw">return</span> <span class="ruby-constant">ISI_record</span>.<span class="ruby-identifier">new</span>(<span class="ruby-identifier">hash</span>) <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ER/</span>
17
+ 214: <span class="ruby-keyword kw">next</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^(EF|FN|VR)/</span> <span class="ruby-comment cmt"># ignore file-unique tags</span>
18
+ 215: <span class="ruby-keyword kw">next</span> <span class="ruby-keyword kw">if</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^\s*$/</span> <span class="ruby-comment cmt"># ignore blank lines</span>
19
+ 216: <span class="ruby-keyword kw">while</span> <span class="ruby-identifier">line</span> <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/\!$/</span>
20
+ 217: <span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp!</span>.<span class="ruby-identifier">chop!</span> <span class="ruby-comment cmt"># continued to next line if the line ends with &quot;!&quot;</span>
21
+ 218: <span class="ruby-identifier">line</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">gets</span>
22
+ 219: <span class="ruby-keyword kw">end</span>
23
+ 220: <span class="ruby-comment cmt">#===== Normal tags</span>
24
+ 221: <span class="ruby-keyword kw">case</span> <span class="ruby-identifier">line</span>
25
+ 222: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(AU|AF|CR) /</span>
26
+ 223: <span class="ruby-identifier">tag</span> = <span class="ruby-identifier">$1</span>
27
+ 224: <span class="ruby-identifier">authors</span> = [<span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^(AU|AF|CR) /</span>,<span class="ruby-value str">''</span>)]
28
+ 225: <span class="ruby-keyword kw">while</span> (<span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>) <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ /</span>
29
+ 226: <span class="ruby-identifier">authors</span>.<span class="ruby-identifier">push</span>(<span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^\s+/</span>,<span class="ruby-value str">''</span>))
30
+ 227: <span class="ruby-keyword kw">end</span>
31
+ 228: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">tag</span>] = <span class="ruby-identifier">authors</span>
32
+ 229: <span class="ruby-keyword kw">redo</span>
33
+ 230: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(NR|PG|PY|TC) (.*)$/</span>
34
+ 231: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">$1</span>] = <span class="ruby-identifier">$2</span>.<span class="ruby-identifier">to_i</span>
35
+ 232: <span class="ruby-keyword kw">when</span> <span class="ruby-regexp re">/^(AB|AP|AR|BN|BP|C1|CA|CL|CT|CY|DE|DI|DT|ED|EM|EP|FN|FU|FX|GA|ID|IS|J9|JI|LA|PA|PD|PI|PN|PT|PU|RP|SC|SE|SI|SN|SO|SP|SU|TI|UT|VL) (.*)$/</span>
36
+ 233: <span class="ruby-identifier">tag</span> = <span class="ruby-identifier">$1</span>
37
+ 234: <span class="ruby-identifier">str</span> = <span class="ruby-identifier">$2</span>
38
+ 235: <span class="ruby-keyword kw">while</span> (<span class="ruby-identifier">line</span> = <span class="ruby-identifier">gets</span>) <span class="ruby-operator">=~</span> <span class="ruby-regexp re">/^ /</span>
39
+ 236: <span class="ruby-identifier">str</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-identifier">line</span>.<span class="ruby-identifier">chomp</span>.<span class="ruby-identifier">sub</span>(<span class="ruby-regexp re">/^ /</span>,<span class="ruby-value str">''</span>)
40
+ 237: <span class="ruby-keyword kw">end</span>
41
+ 238: <span class="ruby-identifier">hash</span>[<span class="ruby-identifier">tag</span>] = <span class="ruby-identifier">str</span>
42
+ 239: <span class="ruby-keyword kw">redo</span>
43
+ 240: <span class="ruby-keyword kw">else</span>
44
+ 241: <span class="ruby-constant">STDERR</span> <span class="ruby-operator">&lt;&lt;</span> <span class="ruby-node">&quot;#{$FILENAME}:#{file.lineno}: Unknown tag: #{line}&quot;</span>
45
+ 242: <span class="ruby-keyword kw">end</span>
46
+ 243: <span class="ruby-keyword kw">end</span>
47
+ 244: <span class="ruby-keyword kw">return</span> <span class="ruby-keyword kw">nil</span>
48
+ 245: <span class="ruby-keyword kw">end</span></pre>
52
49
  </body>
53
- </html>
50
+ </html>
data/html/classes/ISI_record.html CHANGED
@@ -1,12 +1,9 @@
1
- <?xml version="1.0" encoding="iso-8859-1"?>
2
- <!DOCTYPE html
3
- PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN"
4
- "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
5
-
1
+ <!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Strict//EN"
2
+ "http://www.w3.org/TR/xhtml1/DTD/xhtml1-strict.dtd">
6
3
  <html xmlns="http://www.w3.org/1999/xhtml" xml:lang="en" lang="en">
7
4
  <head>
8
- <title>Class: ISI_record</title>
9
- <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1" />
5
+ <title>Class: ISI_record [isi]</title>
6
+ <meta http-equiv="Content-Type" content="text/html; charset=utf-8" />
10
7
  <meta http-equiv="Content-Script-Type" content="text/javascript" />
11
8
  <link rel="stylesheet" href=".././rdoc-style.css" type="text/css" media="screen" />
12
9
  <script type="text/javascript">
@@ -25,7 +22,7 @@
25
22
  return false;
26
23
 
27
24
  elemStyle = elem.style;
28
-
25
+
29
26
  if ( elemStyle.display != "block" ) {
30
27
  elemStyle.display = "block"
31
28
  } else {
@@ -34,10 +31,10 @@
34
31
 
35
32
  return true;
36
33
  }
37
-
34
+
38
35
  // Make codeblocks hidden by default
39
- document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }</style>" )
40
-
36
+ document.writeln( "<style type=\"text/css\">div.method-source-code { display: none }<\/style>" )
37
+
41
38
  // ]]>
42
39
  </script>
43
40
 
@@ -45,7 +42,6 @@
45
42
  <body>
46
43
 
47
44
 
48
-
49
45
  <div id="classHeader">
50
46
  <table class="header-table">
51
47
  <tr class="top-aligned-row">
@@ -55,128 +51,162 @@
55
51
  <tr class="top-aligned-row">
56
52
  <td><strong>In:</strong></td>
57
53
  <td>
54
+
55
+
58
56
  <a href="../files/lib/isi_rb.html">
57
+
59
58
  lib/isi.rb
59
+
60
60
  </a>
61
+
62
+
61
63
  <br />
64
+
62
65
  </td>
63
66
  </tr>
64
67
 
68
+
65
69
  <tr class="top-aligned-row">
66
70
  <td><strong>Parent:</strong></td>
67
71
  <td>
72
+
68
73
  Object
74
+
69
75
  </td>
70
76
  </tr>
77
+
71
78
  </table>
72
79
  </div>
73
80
  <!-- banner header -->
74
81
 
75
82
  <div id="bodyContent">
76
83
 
77
-
78
-
79
84
  <div id="contextContent">
80
85
 
81
-
82
-
83
86
  </div>
84
87
 
88
+
85
89
  <div id="method-list">
86
90
  <h3 class="section-bar">Methods</h3>
87
91
 
88
92
  <div class="name-list">
89
- <a href="#M000001">new</a>&nbsp;&nbsp;
90
- <a href="#M000003">to_bibtex</a>&nbsp;&nbsp;
91
- <a href="#M000002">to_tohoku_DB</a>&nbsp;&nbsp;
93
+
94
+ <a href="#M000002">new</a>&nbsp;&nbsp;
95
+
96
+ <a href="#M000004">to_bibtex</a>&nbsp;&nbsp;
97
+
98
+ <a href="#M000003">to_tohoku_DB</a>&nbsp;&nbsp;
99
+
92
100
  </div>
93
101
  </div>
94
102
 
95
103
  </div>
96
104
 
97
-
98
105
  <!-- if includes -->
99
106
 
100
107
  <div id="section">
101
108
 
102
-
103
109
  <div id="constants-list">
104
110
  <h3 class="section-bar">Constants</h3>
105
111
 
106
112
  <div class="name-list">
107
113
  <table summary="Constants">
114
+
108
115
  <tr class="top-aligned-row context-row">
109
116
  <td class="context-item-name">FMT</td>
110
117
  <td>=</td>
111
118
  <td class="context-item-value">Text::Format.new(:columns =&gt; 80, :first_indent =&gt; 1, :left_margin =&gt; 22)</td>
119
+
112
120
  </tr>
121
+
113
122
  </table>
114
123
  </div>
115
124
  </div>
116
125
 
117
126
 
118
127
 
119
-
120
-
121
128
 
122
129
  <!-- if method_list -->
130
+
123
131
  <div id="methods">
132
+
124
133
  <h3 class="section-bar">Public Class methods</h3>
125
134
 
126
- <div id="method-M000001" class="method-detail">
127
- <a name="M000001"></a>
135
+
136
+ <div id="method-M000002" class="method-detail">
137
+ <a name="M000002"></a>
128
138
 
129
139
  <div class="method-heading">
130
- <a href="ISI_record.src/M000001.html" target="Code" class="method-signature"
131
- onclick="popupCode('ISI_record.src/M000001.html');return false;">
140
+
141
+ <a href="ISI_record.src/M000002.html" target="Code" class="method-signature"
142
+ onclick="popupCode('ISI_record.src/M000002.html');return false;">
143
+
132
144
  <span class="method-name">new</span><span class="method-args">(hash)</span>
145
+
133
146
  </a>
147
+
134
148
  </div>
135
-
149
+
136
150
  <div class="method-description">
151
+
137
152
  </div>
138
153
  </div>
139
154
 
155
+
140
156
  <h3 class="section-bar">Public Instance methods</h3>
141
157
 
142
- <div id="method-M000003" class="method-detail">
143
- <a name="M000003"></a>
158
+
159
+ <div id="method-M000004" class="method-detail">
160
+ <a name="M000004"></a>
144
161
 
145
162
  <div class="method-heading">
146
- <a href="ISI_record.src/M000003.html" target="Code" class="method-signature"
147
- onclick="popupCode('ISI_record.src/M000003.html');return false;">
163
+
164
+ <a href="ISI_record.src/M000004.html" target="Code" class="method-signature"
165
+ onclick="popupCode('ISI_record.src/M000004.html');return false;">
166
+
148
167
  <span class="method-name">to_bibtex</span><span class="method-args">()</span>
168
+
149
169
  </a>
170
+
150
171
  </div>
151
-
172
+
152
173
  <div class="method-description">
174
+
153
175
  </div>
154
176
  </div>
155
177
 
156
- <div id="method-M000002" class="method-detail">
157
- <a name="M000002"></a>
178
+
179
+ <div id="method-M000003" class="method-detail">
180
+ <a name="M000003"></a>
158
181
 
159
182
  <div class="method-heading">
160
- <a href="ISI_record.src/M000002.html" target="Code" class="method-signature"
161
- onclick="popupCode('ISI_record.src/M000002.html');return false;">
183
+
184
+ <a href="ISI_record.src/M000003.html" target="Code" class="method-signature"
185
+ onclick="popupCode('ISI_record.src/M000003.html');return false;">
186
+
162
187
  <span class="method-name">to_tohoku_DB</span><span class="method-args">(tohoku_id, name)</span>
188
+
163
189
  </a>
190
+
164
191
  </div>
165
-
192
+
166
193
  <div class="method-description">
194
+
167
195
  </div>
168
196
  </div>
169
197
 
170
198
 
199
+
171
200
  </div>
172
201
 
173
202
 
174
- </div>
175
203
 
176
204
 
205
+ </div>
206
+
177
207
  <div id="validator-badges">
178
208
  <p><small><a href="http://validator.w3.org/check/referer">[Validate]</a></small></p>
179
209
  </div>
180
210
 
181
211
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182
- </html>
212
+ </html>