his_emr_api_lab 0.0.7 → 0.0.8
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- checksums.yaml +4 -4
- data/app/services/lab/labelling_service/order_label.rb +20 -2
- data/app/services/lab/lims/worker.rb +3 -1
- data/lib/lab/version.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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1
1
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---
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2
2
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SHA256:
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3
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-
metadata.gz:
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4
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-
data.tar.gz:
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3
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+
metadata.gz: 7b410e215fad55950c150d2ec7a82bda3f434cca4cc287e0d4fca2a9116e9182
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4
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+
data.tar.gz: 6b3a0c75c303c2139c1f6f963875667c4606bce42d23f6a22c277412e24db960
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5
5
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SHA512:
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6
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-
metadata.gz:
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|
7
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-
data.tar.gz:
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6
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+
metadata.gz: 4f6068aecbc02d5c3df75ac422c4d4f9baeac86c6559a1e75078ef68088b4e6702239a366fb5e5879a2925592e3440a2880668bcc50f4730c9d2051f522ac94a
|
|
7
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+
data.tar.gz: 5e3b4d61f507f2de7847951dcdd738a50dd29ba4ae5f981ce8284f3ba11c35d6d1c337787c1b78154b96eb318fc5343d404a3827fd02c89ffc3da60eb2d617c3
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@@ -27,7 +27,7 @@ module Lab
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27
27
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'',
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28
28
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drawer,
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29
29
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'',
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30
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-
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30
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+
tests,
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31
31
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reason_for_test,
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32
32
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order.accession_number,
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33
33
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order.accession_number)
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@@ -36,7 +36,7 @@ module Lab
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36
36
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def reason_for_test
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37
37
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return 'Unknown' unless order.reason_for_test
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38
38
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39
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-
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39
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+
short_concept_name(order.reason_for_test.value_coded) || 'Unknown'
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40
40
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end
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41
41
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42
42
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def patient
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@@ -73,6 +73,24 @@ module Lab
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73
73
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ConceptName.find_by_concept_id(order.concept_id)&.name || 'Unknown'
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74
74
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end
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75
75
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|
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76
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+
def tests
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77
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+
tests = order.tests.map do |test|
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78
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+
name = short_concept_name(test.value_coded) || 'Unknown'
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79
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+
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80
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+
next 'VL' if name.match?(/Viral load/i)
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|
81
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+
|
|
82
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+
name.size > 7 ? name[0..6] : name
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|
83
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+
end
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84
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+
|
|
85
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+
tests.join(', ')
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86
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+
end
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|
87
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+
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|
88
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+
def short_concept_name(concept_id)
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|
89
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+
ConceptName.where(concept_id: concept_id)
|
|
90
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+
.min_by { |concept| concept.name.size }
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|
91
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+
&.name
|
|
92
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+
end
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93
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+
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76
94
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def unknown_concept
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77
95
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ConceptName.find_by_name('Unknown')
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78
96
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end
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@@ -28,7 +28,9 @@ module Lab
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28
28
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fout.write("Worker ##{Process.pid} started at #{Time.now}")
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29
29
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worker = new(Api.new)
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30
30
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worker.pull_orders
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|
31
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-
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|
31
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+
# TODO: Verify that names being pushed to LIMS are of the correct format (ie matching
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32
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+
# LIMS naming conventions). Enable pushing when that is done
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|
33
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+
# worker.push_orders
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|
32
34
|
end
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|
33
35
|
end
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34
36
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data/lib/lab/version.rb
CHANGED