gnfinder 0.15.5 → 0.16.1
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- checksums.yaml +4 -4
- data/README.md +51 -26
- data/lib/gnfinder/client.rb +29 -16
- data/lib/gnfinder/version.rb +1 -1
- metadata +2 -2
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data/README.md
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# gnfinder
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Ruby gem to access functionality of [GNfinder] project written in Go. This gem
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allows to perform fast and accurate scientific name finding in
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allows to perform fast and accurate scientific name finding in texts,
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web-pages, as well as a large variety of documents. Document files can be
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accessed either locally or via a URL.
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<!-- vim-markdown-toc GFM -->
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* [Requirements](#requirements)
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* [Installation](#installation)
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* [Usage](#usage)
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* [Finding names in a text using default settings](#finding-names-in-a-text-using-default-settings)
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* [Finding names by a URL](#finding-names-by-a-url)
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* [Finding names in a file](#finding-names-in-a-file)
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* [Optionally disable Bayes search](#optionally-disable-bayes-search)
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* [Set a language for the text](#set-a-language-for-the-text)
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* [Set automatic detection of text's language](#set-automatic-detection-of-texts-language)
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* [Set verification option](#set-verification-option)
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* [Set preferred data-sources list](#set-preferred-data-sources-list)
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* [Combination of parameters.](#combination-of-parameters)
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* [Development](#development)
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<!-- vim-markdown-toc -->
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## Requirements
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This gem uses REST API to access a running [GNfinder] server. You can find how
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to run it in [GNfinder] README file.
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to run it in [GNfinder] README file. By default it uses
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`https://gnfinder.globalnames.org/api/v1`
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## Installation
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To use the gem from a Ruby proect install it using Gemfile, or manually:
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```bash
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gem install gnfinder
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```
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[source code][client] of this gem for reference. For other usages read
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the original Go-lang [GNfinder] README file.
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First you need to create
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First you need to create an instance of a `gnfinder` client
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```ruby
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require 'gnfinder'
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gf = Gnfinder::Client.new
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```
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By default the client will try to connect to
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have another location for the
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By default the client will try to connect to
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`https://gnfinder.globalnames.org/api/v1`. If you have another location for the
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server use:
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```ruby
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require 'gnfinder'
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# you can use global public gnfinder server
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# located at finder-rpc.globalnames.org
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gf = Gnfinder::Client.new(host = 'finder
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gf = Gnfinder::Client.new(host = 'finder.example.org', port = 80)
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# localhost,
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# localhost, port 8000
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gf = Gnfinder::Client.new(host = '0.0.0.0', port = 8000)
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```
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puts res.names[0].odds
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```
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### Finding names in a file
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Many different file types are supported (PDF, JPB, TIFF, MS Word, MS Excel
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etc).
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```ruby
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path = "/path/to/file.pdf"
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res = gf.find_file(path)
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puts res.names[0].value
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```
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Support of file-uploading uses 'multipart/form' approach. Here is an
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illustration for `curl`:
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```bash
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curl -v -F sources[]=1 -F sources[]=12 -F file=@file.pdf \
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https://finder.globalnames.org/api/v1/find
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```
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Returned result is quite detailed and contains many accessor methods, for
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example:
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* value: name-string cleaned up for verification.
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* verbatim: name-string as it was found in the text.
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data/lib/gnfinder/client.rb
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@site['/ping'].get.body
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end
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def find_file(path, opts = {})
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params = {}
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update_params(params, opts)
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file = File.new(path, 'rb')
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params = params.merge(file: file)
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resp = @site['find'].post(params)
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prepare_result(resp)
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end
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def find_url(url, opts = {})
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return to_open_struct({ "names": [] }) if url.to_s.strip == ''
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@@ -39,29 +48,33 @@ module Gnfinder
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# rubocop:disable all
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def find(params, opts = {})
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update_params(params, opts)
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resp = @site['find'].post params.to_json, {content_type: :json, accept: :json}
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prepare_result(resp)
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end
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# rubocop:enable all
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def prepare_result(response)
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output = JSON.parse(response.body)
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res = output['metadata']
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res['names'] = output['names'] || []
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res = res.deep_transform_keys(&:underscore)
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res['names'] = [] if res['names'].nil?
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to_open_struct(res)
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end
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# rubocop:disable all
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def update_params(params, opts)
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params[:noBayes] = true if opts[:no_bayes]
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params[:oddsDetails] = true if opts[:odds_details]
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params[:language] = opts[:language] if opts[:language].to_s.strip != ''
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if opts[:words_around] && opts[:words_around]
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params[:wordsAround] = opts[:words_around]
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end
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params[:wordsAround] = opts[:words_around] if opts[:words_around] && opts[:words_around].positive?
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params[:verification] = true if opts[:verification]
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if opts[:sources] && !opts[:sources].empty?
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params[:sources] = opts[:sources]
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end
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res = @site['find'].post params.to_json, {content_type: :json, accept: :json}
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output = JSON.parse(res.body)
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res = output["metadata"]
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res["names"] = output["names"] || []
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res = res.deep_transform_keys(&:underscore)
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if res["names"].nil?
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res["names"] = []
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end
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to_open_struct(res)
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params[:sources] = opts[:sources] if opts[:sources] && !opts[:sources].empty?
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end
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# rubocop:enable all
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data/lib/gnfinder/version.rb
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metadata
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--- !ruby/object:Gem::Specification
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name: gnfinder
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version: !ruby/object:Gem::Version
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version: 0.
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version: 0.16.1
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platform: ruby
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authors:
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- Dmitry Mozzherin
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autorequire:
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bindir: bin
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cert_chain: []
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date: 2021-10-
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date: 2021-10-17 00:00:00.000000000 Z
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dependencies:
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- !ruby/object:Gem::Dependency
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name: rest-client
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