gn_crossmap 3.1.2 → 3.1.3

checksums.yaml

@@ -1,7 +1,7 @@
 ---
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-  data.tar.gz: ee231d6521ed912b3f970c4c96050368a83a254f
+  metadata.gz: dd937cc49a912ee4e7eefd2706b8050cdb34bd03
+  data.tar.gz: 764ad83d40ef1e9242a937d79548383483773398
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+  data.tar.gz: 609754d18b3079bea30cdadbec424f54dd40f50e759dd8dc1cf3e11266feee7dae74d6b9512edb57d0e8979223a9b5fbf59f67807db7564596632b6533943a17

data/CHANGELOG.md

@@ -1,5 +1,9 @@
 # ``gn_crossmap`` CHANGELOG
 
+## 3.1.3
+
+* @dimus - Fix formatting bug for empty results, remove BOM char from headers
+
 ## 3.1.2
 
 * @dimus - Fixes #37 tab is now default if separator is not found

data/lib/gn_crossmap/collector.rb

@@ -26,7 +26,7 @@ module GnCrossmap
     end
 
     def prepare_field(field)
-      field = field.to_s.tr(":", "/")
+      field = field.to_s.tr(":", "/").delete("\u{feff}")
       return :none if field == ""
       field.split("/")[-1].strip.downcase.to_sym
     end

data/lib/gn_crossmap/result_processor.rb

@@ -30,13 +30,19 @@ module GnCrossmap
     def write_empty_result(datum)
       @stats.stats[:matches][0] += 1
       @stats.stats[:resolved_records] += 1
-      res = @original_data[datum[:supplied_id]]
-      res += [GnCrossmap::MATCH_TYPES[0], datum[:supplied_name_string], nil,
-              datum[:supplied_canonical_form], nil,
-              @input[datum[:supplied_id]][:rank], nil, nil, nil, nil]
+      res = compile_empty_result(datum)
       @writer.write(res)
     end
 
+    def compile_empty_result(datum)
+      res = @original_data[datum[:supplied_id]]
+      res += [GnCrossmap::MATCH_TYPES[0], datum[:supplied_name_string],
+              nil, nil, nil, nil,
+              @input[datum[:supplied_id]][:rank], nil, nil, nil, nil, nil]
+      res <<  nil if @with_classification
+      res
+    end
+
     def write_result(datum)
       collect_stats(datum)
       datum[:results].each do |result|
@@ -72,7 +78,8 @@ module GnCrossmap
 
     def canonical(name_string)
       parsed = @parser.parse(name_string)[:scientificName]
-      parsed[:canonical].nil? || parsed[:hybrid] ? nil : parsed[:canonical]
+      return nil if parsed[:canonical].nil? || parsed[:hybrid]
+      parsed[:canonical]
     rescue StandardError
       @parser = ScientificNameParser.new
       nil

data/lib/gn_crossmap/version.rb

@@ -2,7 +2,7 @@
 
 # Namespace module for crossmapping checklists to GN sources
 module GnCrossmap
-  VERSION = "3.1.2"
+  VERSION = "3.1.3"
 
   def self.version
     VERSION

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: gn_crossmap
 version: !ruby/object:Gem::Version
-  version: 3.1.2
+  version: 3.1.3
 platform: ruby
 authors:
 - Dmitry Mozzherin
 autorequire: 
 bindir: exe
 cert_chain: []
-date: 2017-08-08 00:00:00.000000000 Z
+date: 2017-08-09 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: biodiversity