fathom 0.2.0 → 0.2.1

data/.gitignore

@@ -3,4 +3,4 @@
 coverage
 rdoc
 pkg
-*.gemspec
+*.gemspec

data/VERSION

@@ -1 +1 @@
-0.2.0
+0.2.1

data/lib/fathom/data_node.rb

@@ -39,7 +39,7 @@ class Fathom::DataNode
   
   protected
     def rng
-      @rng ||= GSL::Rng.alloc
+      @rng ||= GSL::Rng.alloc(GSL::Rng::MT19937_1999, Kernel.rand(100_000))
     end
     
 end

data/lib/fathom/ext/array.rb

@@ -0,0 +1,5 @@
+class Array
+  def rand
+    self[Kernel.rand(self.length)]
+  end
+end

data/lib/fathom/plausible_range.rb

@@ -87,7 +87,7 @@ module Fathom
       end
       
       def rng
-        @rng ||= GSL::Rng.alloc
+        @rng ||= GSL::Rng.alloc(GSL::Rng::MT19937_1999, Kernel.rand(100_000))
       end
   end
   

data/lib/fathom.rb

@@ -10,6 +10,7 @@ require "gsl"
 require 'options_hash'
 
 require 'ext/open_struct'
+require 'ext/array'
 
 module Fathom
   lib = File.expand_path(File.dirname(__FILE__))

metadata

@@ -1,13 +1,13 @@
 --- !ruby/object:Gem::Specification 
 name: fathom
 version: !ruby/object:Gem::Version 
-  hash: 23
+  hash: 21
   prerelease: false
   segments: 
   - 0
   - 2
-  - 0
-  version: 0.2.0
+  - 1
+  version: 0.2.1
 platform: ruby
 authors: 
 - David
@@ -53,7 +53,6 @@ files:
 - Rakefile
 - VERSION
 - autotest/discover.rb
-- fathom.gemspec
 - lib/fathom.rb
 - lib/fathom/agent.rb
 - lib/fathom/agent/agent_cluster.rb
@@ -69,6 +68,7 @@ files:
 - lib/fathom/combined_plausibilities.rb
 - lib/fathom/concept.rb
 - lib/fathom/data_node.rb
+- lib/fathom/ext/array.rb
 - lib/fathom/ext/faster_csv.rb
 - lib/fathom/ext/open_struct.rb
 - lib/fathom/import.rb

data/fathom.gemspec

@@ -1,117 +0,0 @@
-# Generated by jeweler
-# DO NOT EDIT THIS FILE DIRECTLY
-# Instead, edit Jeweler::Tasks in Rakefile, and run the gemspec command
-# -*- encoding: utf-8 -*-
-
-Gem::Specification.new do |s|
-  s.name = %q{fathom}
-  s.version = "0.2.0"
-
-  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
-  s.authors = ["David"]
-  s.date = %q{2010-11-07}
-  s.description = %q{Collecting some decision support tools in a decoupled Ruby library.}
-  s.email = %q{davidlamontrichards@gmail.com}
-  s.extra_rdoc_files = [
-    "LICENSE",
-     "README.md"
-  ]
-  s.files = [
-    ".bundle/config",
-     ".document",
-     ".gitignore",
-     ".rspec",
-     "Gemfile",
-     "Gemfile.lock",
-     "LICENSE",
-     "README.md",
-     "Rakefile",
-     "VERSION",
-     "autotest/discover.rb",
-     "fathom.gemspec",
-     "lib/fathom.rb",
-     "lib/fathom/agent.rb",
-     "lib/fathom/agent/agent_cluster.rb",
-     "lib/fathom/agent/properties.rb",
-     "lib/fathom/archive/conditional_probability_matrix.rb",
-     "lib/fathom/archive/n2.rb",
-     "lib/fathom/archive/n3.rb",
-     "lib/fathom/archive/node.rb",
-     "lib/fathom/archive/noodle.rb",
-     "lib/fathom/archive/scratch.rb",
-     "lib/fathom/basic_node.rb",
-     "lib/fathom/causal_graph.rb",
-     "lib/fathom/combined_plausibilities.rb",
-     "lib/fathom/concept.rb",
-     "lib/fathom/data_node.rb",
-     "lib/fathom/ext/faster_csv.rb",
-     "lib/fathom/ext/open_struct.rb",
-     "lib/fathom/import.rb",
-     "lib/fathom/import/csv_import.rb",
-     "lib/fathom/import/yaml_import.rb",
-     "lib/fathom/inverter.rb",
-     "lib/fathom/knowledge_base.rb",
-     "lib/fathom/monte_carlo_set.rb",
-     "lib/fathom/node_utilities.rb",
-     "lib/fathom/plausible_range.rb",
-     "lib/fathom/simulation.rb",
-     "lib/fathom/simulation/tick_methods.rb",
-     "lib/fathom/simulation/tick_simulation.rb",
-     "lib/fathom/value_aggregator.rb",
-     "lib/fathom/value_description.rb",
-     "lib/fathom/value_multiplier.rb",
-     "lib/options_hash.rb",
-     "spec/fathom/agent/agent_cluster_spec.rb",
-     "spec/fathom/agent_spec.rb",
-     "spec/fathom/data_node_spec.rb",
-     "spec/fathom/import/csv_import_spec.rb",
-     "spec/fathom/import/yaml_import_spec.rb",
-     "spec/fathom/import_spec.rb",
-     "spec/fathom/knowledge_base_spec.rb",
-     "spec/fathom/monte_carlo_set_spec.rb",
-     "spec/fathom/plausible_range_spec.rb",
-     "spec/fathom/simulation/tick_simulation_spec.rb",
-     "spec/fathom/simulation_spec.rb",
-     "spec/fathom/value_description_spec.rb",
-     "spec/fathom_spec.rb",
-     "spec/spec_helper.rb",
-     "spec/support/demo.yml",
-     "spec/support/demo_agent.rb"
-  ]
-  s.homepage = %q{http://github.com/davidrichards/fathom}
-  s.rdoc_options = ["--charset=UTF-8"]
-  s.require_paths = ["lib"]
-  s.rubygems_version = %q{1.3.7}
-  s.summary = %q{Decision Support in Ruby}
-  s.test_files = [
-    "spec/fathom/agent/agent_cluster_spec.rb",
-     "spec/fathom/agent_spec.rb",
-     "spec/fathom/data_node_spec.rb",
-     "spec/fathom/import/csv_import_spec.rb",
-     "spec/fathom/import/yaml_import_spec.rb",
-     "spec/fathom/import_spec.rb",
-     "spec/fathom/knowledge_base_spec.rb",
-     "spec/fathom/monte_carlo_set_spec.rb",
-     "spec/fathom/plausible_range_spec.rb",
-     "spec/fathom/simulation/tick_simulation_spec.rb",
-     "spec/fathom/simulation_spec.rb",
-     "spec/fathom/value_description_spec.rb",
-     "spec/fathom_spec.rb",
-     "spec/spec_helper.rb",
-     "spec/support/demo_agent.rb"
-  ]
-
-  if s.respond_to? :specification_version then
-    current_version = Gem::Specification::CURRENT_SPECIFICATION_VERSION
-    s.specification_version = 3
-
-    if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
-      s.add_development_dependency(%q<rspec>, [">= 0"])
-    else
-      s.add_dependency(%q<rspec>, [">= 0"])
-    end
-  else
-    s.add_dependency(%q<rspec>, [">= 0"])
-  end
-end
-