fasta_util 0.4.0 → 0.5.0
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- data/VERSION +1 -1
- data/bin/fasta_util +1 -1
- data/fasta_util.gemspec +2 -2
- metadata +3 -3
data/VERSION
CHANGED
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@@ -1 +1 @@
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1
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-
0.
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1
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+
0.5.0
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data/bin/fasta_util
CHANGED
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@@ -63,7 +63,7 @@ class FastaUtility < Thor
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def filter(filename)
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invoke :filecheck
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invoke :filecheck, [options.definitions_file]
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66
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-
requested_definitions = File.open(options.definitions_file).map{|definition| definition.strip}
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66
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+
requested_definitions = File.open(options.definitions_file).map{|definition| definition.strip} if options.definitions_file
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Bio::FlatFile.open(filename).each do |entry|
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passed = true
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passed &&= (entry.length >= options.length_cutoff)
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data/fasta_util.gemspec
CHANGED
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@@ -5,11 +5,11 @@
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5
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Gem::Specification.new do |s|
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s.name = %q{fasta_util}
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-
s.version = "0.
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8
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+
s.version = "0.5.0"
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s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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s.authors = ["robsyme"]
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-
s.date = %q{2011-07-
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+
s.date = %q{2011-07-13}
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s.default_executable = %q{fasta_util}
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s.description = %q{Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on the fasta_tool script that I think was written by Jason Stajich.}
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s.email = %q{rob.syme@gmail.com}
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metadata
CHANGED
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@@ -2,7 +2,7 @@
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name: fasta_util
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version: !ruby/object:Gem::Version
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prerelease:
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-
version: 0.
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5
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+
version: 0.5.0
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platform: ruby
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authors:
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- robsyme
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@@ -10,7 +10,7 @@ autorequire:
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bindir: bin
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cert_chain: []
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-
date: 2011-07-
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+
date: 2011-07-13 00:00:00 +08:00
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default_executable: fasta_util
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dependencies:
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- !ruby/object:Gem::Dependency
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@@ -125,7 +125,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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requirements:
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- - ">="
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- !ruby/object:Gem::Version
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-
hash:
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+
hash: 221242491910546500
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segments:
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- 0
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version: "0"
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