fasta_util 0.4.0 → 0.5.0

data/VERSION

@@ -1 +1 @@
-0.4.0
+0.5.0

data/bin/fasta_util

@@ -63,7 +63,7 @@ class FastaUtility < Thor
   def filter(filename)
     invoke :filecheck
     invoke :filecheck, [options.definitions_file]
-    requested_definitions = File.open(options.definitions_file).map{|definition| definition.strip}
+    requested_definitions = File.open(options.definitions_file).map{|definition| definition.strip} if options.definitions_file
     Bio::FlatFile.open(filename).each do |entry|
       passed = true
       passed &&= (entry.length >= options.length_cutoff)

data/fasta_util.gemspec

@@ -5,11 +5,11 @@
 
 Gem::Specification.new do |s|
   s.name = %q{fasta_util}
-  s.version = "0.4.0"
+  s.version = "0.5.0"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["robsyme"]
-  s.date = %q{2011-07-07}
+  s.date = %q{2011-07-13}
   s.default_executable = %q{fasta_util}
   s.description = %q{Easy fasta filtering, wrapping, calculating common statistics, sorting etc. Based on the fasta_tool script that I think was written by Jason Stajich.}
   s.email = %q{rob.syme@gmail.com}

metadata

@@ -2,7 +2,7 @@
 name: fasta_util
 version: !ruby/object:Gem::Version 
   prerelease: 
-  version: 0.4.0
+  version: 0.5.0
 platform: ruby
 authors: 
 - robsyme
@@ -10,7 +10,7 @@ autorequire:
 bindir: bin
 cert_chain: []
 
-date: 2011-07-07 00:00:00 +08:00
+date: 2011-07-13 00:00:00 +08:00
 default_executable: fasta_util
 dependencies: 
 - !ruby/object:Gem::Dependency 
@@ -125,7 +125,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
   requirements: 
   - - ">="
     - !ruby/object:Gem::Version 
-      hash: 4438515197359890059
+      hash: 221242491910546500
       segments: 
       - 0
       version: "0"