fast_bayes 0.1.0

checksums.yaml

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+SHA1:
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+  data.tar.gz: 983b3744a2e1c4468f7da891cfe8ad46c380c4d0
+SHA512:
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data/.gitignore

@@ -0,0 +1,41 @@
+*.gem
+*.rbc
+/.bundle/
+/.yardoc
+/Gemfile.lock
+/_yardoc/
+/coverage/
+/doc/
+/pkg/
+/spec/reports/
+/tmp/
+
+# Compiled Object files
+*.slo
+*.lo
+*.o
+*.obj
+
+# Precompiled Headers
+*.gch
+*.pch
+
+# Compiled Dynamic libraries
+*.so
+*.dylib
+*.dll
+
+# Fortran module files
+*.mod
+*.smod
+
+# Compiled Static libraries
+*.lai
+*.la
+*.a
+*.lib
+
+# Executables
+*.exe
+*.out
+*.app

data/.rspec

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+--format documentation
+--color

data/.travis.yml

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+sudo: false
+language: ruby
+rvm:
+  - 2.3.1
+before_install: gem install bundler -v 1.13.0

data/Gemfile

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+source 'https://rubygems.org'
+
+# Specify your gem's dependencies in fast_bayes.gemspec
+gemspec

data/LICENSE.txt

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+The MIT License (MIT)
+
+Copyright (c) 2016 Chang Rajani
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in
+all copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
+THE SOFTWARE.

data/README.md

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+# FastBayes
+
+A fast implementation of the naive Bayes classification algorithm. Written in C++ with an interface for Ruby using [Rice](https://github.com/jasonroelofs/rice).
+
+Performs text classification with no separate training step needed, the cost of training is split between classification and observation. This is especially useful when data is an online stream, as the system can gradually improve.
+
+## Installation
+
+Add this line to your application's Gemfile:
+
+```ruby
+gem 'fast_bayes'
+```
+
+And then execute:
+
+    $ bundle
+
+Or install it yourself as:
+
+    $ gem install fast_bayes
+
+## Usage
+
+TODO: Write usage instructions here
+
+## Development
+
+After checking out the repo, run `bin/setup` to install dependencies. Then, run `rake spec` to run the tests. You can also run `bin/console` for an interactive prompt that will allow you to experiment.
+
+To install this gem onto your local machine, run `bundle exec rake install`. To release a new version, update the version number in `version.rb`, and then run `bundle exec rake release`, which will create a git tag for the version, push git commits and tags, and push the `.gem` file to [rubygems.org](https://rubygems.org).
+
+## Contributing
+
+Bug reports and pull requests are welcome on GitHub at https://github.com/[USERNAME]/fast_bayes.
+
+
+## License
+
+The gem is available as open source under the terms of the [MIT License](http://opensource.org/licenses/MIT).

data/Rakefile

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+require "bundler/gem_tasks"
+require "rspec/core/rake_task"
+require "rake/extensiontask"
+
+RSpec::Core::RakeTask.new(:spec)
+
+task :default => :spec
+
+Rake::ExtensionTask.new "fast_bayes" do |ext|
+  ext.lib_dir = "lib/fast_bayes"
+end

data/bin/console

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+#!/usr/bin/env ruby
+
+require "bundler/setup"
+require "fast_bayes"
+
+# You can add fixtures and/or initialization code here to make experimenting
+# with your gem easier. You can also use a different console, if you like.
+
+# (If you use this, don't forget to add pry to your Gemfile!)
+# require "pry"
+# Pry.start
+
+require "irb"
+IRB.start

data/bin/setup

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+#!/usr/bin/env bash
+set -euo pipefail
+IFS=$'\n\t'
+set -vx
+
+bundle install
+
+# Do any other automated setup that you need to do here

data/ext/Makefile

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+debug:
+	clang++ -std=c++11 -g ./test/*.cpp
+test:
+	clang++ -std=c++11 -O3 ./test/*.cpp && ./a.out
+main:
+	clang++ -std=c++11 -O3 ./src/main.cpp && ./a.out

data/ext/fast_bayes/Makefile

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+
+SHELL = /bin/sh
+
+# V=0 quiet, V=1 verbose.  other values don't work.
+V = 0
+Q1 = $(V:1=)
+Q = $(Q1:0=@)
+ECHO1 = $(V:1=@:)
+ECHO = $(ECHO1:0=@echo)
+NULLCMD = :
+
+#### Start of system configuration section. ####
+
+srcdir = .
+topdir = /home/chang/.rbenv/versions/2.3.1/include/ruby-2.3.0
+hdrdir = $(topdir)
+arch_hdrdir = /home/chang/.rbenv/versions/2.3.1/include/ruby-2.3.0/x86_64-linux
+PATH_SEPARATOR = :
+VPATH = $(srcdir):$(arch_hdrdir)/ruby:$(hdrdir)/ruby
+
+prefix = $(DESTDIR)/home/chang/.rbenv/versions/2.3.1
+
+rubysitearchprefix = $(rubylibprefix)/$(sitearch)
+
+rubyarchprefix = $(rubylibprefix)/$(arch)
+
+rubylibprefix = $(libdir)/$(RUBY_BASE_NAME)
+
+exec_prefix = $(prefix)
+
+vendorarchhdrdir = $(vendorhdrdir)/$(sitearch)
+
+sitearchhdrdir = $(sitehdrdir)/$(sitearch)
+
+rubyarchhdrdir = $(rubyhdrdir)/$(arch)
+
+vendorhdrdir = $(rubyhdrdir)/vendor_ruby
+
+sitehdrdir = $(rubyhdrdir)/site_ruby
+
+rubyhdrdir = $(includedir)/$(RUBY_VERSION_NAME)
+
+vendorarchdir = $(vendorlibdir)/$(sitearch)
+
+vendorlibdir = $(vendordir)/$(ruby_version)
+
+vendordir = $(rubylibprefix)/vendor_ruby
+
+sitearchdir = $(sitelibdir)/$(sitearch)
+
+sitelibdir = $(sitedir)/$(ruby_version)
+
+sitedir = $(rubylibprefix)/site_ruby
+
+rubyarchdir = $(rubylibdir)/$(arch)
+
+rubylibdir = $(rubylibprefix)/$(ruby_version)
+
+sitearchincludedir = $(includedir)/$(sitearch)
+
+archincludedir = $(includedir)/$(arch)
+
+sitearchlibdir = $(libdir)/$(sitearch)
+
+archlibdir = $(libdir)/$(arch)
+
+ridir = $(datarootdir)/$(RI_BASE_NAME)
+
+mandir = $(datarootdir)/man
+
+localedir = $(datarootdir)/locale
+
+libdir = $(exec_prefix)/lib
+
+psdir = $(docdir)
+
+pdfdir = $(docdir)
+
+dvidir = $(docdir)
+
+htmldir = $(docdir)
+
+infodir = $(datarootdir)/info
+
+docdir = $(datarootdir)/doc/$(PACKAGE)
+
+oldincludedir = $(DESTDIR)/usr/include
+
+includedir = $(prefix)/include
+
+localstatedir = $(prefix)/var
+
+sharedstatedir = $(prefix)/com
+
+sysconfdir = $(prefix)/etc
+
+datadir = $(datarootdir)
+
+datarootdir = $(prefix)/share
+
+libexecdir = $(exec_prefix)/libexec
+
+sbindir = $(exec_prefix)/sbin
+
+bindir = $(exec_prefix)/bin
+
+archdir = $(rubyarchdir)
+
+
+
+CC = gcc
+CXX = g++
+LIBRUBY = $(LIBRUBY_SO)
+LIBRUBY_A = lib$(RUBY_SO_NAME)-static.a
+LIBRUBYARG_SHARED = -Wl,-R$(libdir) -L$(libdir) -l$(RUBY_SO_NAME)
+LIBRUBYARG_STATIC = -Wl,-R/home/chang/.rbenv/versions/2.3.1/lib -L/home/chang/.rbenv/versions/2.3.1/lib -lruby-static
+empty =
+OUTFLAG = -o $(empty)
+COUTFLAG = -o $(empty)
+
+RUBY_EXTCONF_H = 
+cflags   =  $(optflags) $(debugflags) $(warnflags)
+cxxflags =  $(optflags) $(debugflags) $(warnflags)
+optflags = -O3 -fno-fast-math
+debugflags = -ggdb3
+warnflags = -Wall -Wextra -Wno-unused-parameter -Wno-parentheses -Wno-long-long -Wno-missing-field-initializers -Wunused-variable -Wpointer-arith -Wwrite-strings -Wdeclaration-after-statement -Wimplicit-function-declaration -Wdeprecated-declarations -Wno-packed-bitfield-compat
+CCDLFLAGS = -fPIC
+CFLAGS   = $(CCDLFLAGS) $(cflags)  -fPIC $(ARCH_FLAG)
+INCFLAGS = -I. -I$(arch_hdrdir) -I$(hdrdir)/ruby/backward -I$(hdrdir) -I$(srcdir)
+DEFS     = 
+CPPFLAGS =  -I/home/chang/.rbenv/versions/2.3.1/include  $(DEFS) $(cppflags)  -I/home/chang/.rbenv/versions/2.3.1/lib/ruby/gems/2.3.0/gems/rice-2.1.0/ruby/lib/include
+CXXFLAGS = $(CFLAGS)  -Wall -g -std=c++11 
+ldflags  = -L. -L/home/chang/.rbenv/versions/2.3.1/lib  -fstack-protector -rdynamic -Wl,-export-dynamic  -L/home/chang/.rbenv/versions/2.3.1/lib/ruby/gems/2.3.0/gems/rice-2.1.0/ruby/lib/lib -lrice
+dldflags =  
+ARCH_FLAG = 
+DLDFLAGS = $(ldflags) $(dldflags) $(ARCH_FLAG)
+LDSHARED = g++ -shared
+LDSHAREDXX = $(CXX) -shared
+AR = ar
+EXEEXT = 
+
+
+RUBY_INSTALL_NAME = $(RUBY_BASE_NAME)
+
+RUBY_SO_NAME = ruby
+
+RUBYW_INSTALL_NAME = 
+
+RUBY_VERSION_NAME = $(RUBY_BASE_NAME)-$(ruby_version)
+
+RUBYW_BASE_NAME = rubyw
+
+RUBY_BASE_NAME = ruby
+
+
+arch = x86_64-linux
+sitearch = $(arch)
+ruby_version = 2.3.0
+ruby = $(bindir)/$(RUBY_BASE_NAME)
+RUBY = $(ruby)
+ruby_headers = $(hdrdir)/ruby.h $(hdrdir)/ruby/ruby.h $(hdrdir)/ruby/defines.h $(hdrdir)/ruby/missing.h $(hdrdir)/ruby/intern.h $(hdrdir)/ruby/st.h $(hdrdir)/ruby/subst.h $(arch_hdrdir)/ruby/config.h
+
+RM = rm -f
+RM_RF = $(RUBY) -run -e rm -- -rf
+RMDIRS = rmdir --ignore-fail-on-non-empty -p
+MAKEDIRS = /bin/mkdir -p
+INSTALL = /usr/bin/install -c
+INSTALL_PROG = $(INSTALL) -m 0755
+INSTALL_DATA = $(INSTALL) -m 644
+COPY = cp
+TOUCH = exit >
+
+#### End of system configuration section. ####
+
+preload = 
+
+
+CXX = g++
+
+libpath = . $(libdir)
+LIBPATH =  -L. -L$(libdir) -Wl,-R$(libdir)
+DEFFILE = 
+
+CLEANFILES = mkmf.log
+DISTCLEANFILES = 
+DISTCLEANDIRS = 
+
+extout = 
+extout_prefix = 
+target_prefix = 
+LOCAL_LIBS = 
+LIBS = -Wl,-R/home/chang/.rbenv/versions/2.3.1/lib -L/home/chang/.rbenv/versions/2.3.1/lib -lruby -lpthread -lgmp -ldl -lcrypt -lm   -lc
+ORIG_SRCS = main.cpp wrapper.cpp
+SRCS = $(ORIG_SRCS) 
+OBJS = main.o wrapper.o
+HDRS = $(srcdir)/bayes.h
+TARGET = fast_bayes
+TARGET_NAME = fast_bayes
+TARGET_ENTRY = Init_$(TARGET_NAME)
+DLLIB = $(TARGET).so
+EXTSTATIC = 
+STATIC_LIB = 
+
+TIMESTAMP_DIR = .
+BINDIR        = $(bindir)
+RUBYCOMMONDIR = $(sitedir)$(target_prefix)
+RUBYLIBDIR    = $(sitelibdir)$(target_prefix)
+RUBYARCHDIR   = $(sitearchdir)$(target_prefix)
+HDRDIR        = $(rubyhdrdir)/ruby$(target_prefix)
+ARCHHDRDIR    = $(rubyhdrdir)/$(arch)/ruby$(target_prefix)
+
+TARGET_SO     = $(DLLIB)
+CLEANLIBS     = $(TARGET).so 
+CLEANOBJS     = *.o  *.bak
+
+all:    $(DLLIB)
+static: $(STATIC_LIB) install-rb
+.PHONY: all install static install-so install-rb
+.PHONY: clean clean-so clean-static clean-rb
+
+clean-static::
+clean-rb-default::
+clean-rb::
+clean-so::
+clean: clean-so clean-static clean-rb-default clean-rb
+		-$(Q)$(RM) $(CLEANLIBS) $(CLEANOBJS) $(CLEANFILES) .*.time
+
+distclean-rb-default::
+distclean-rb::
+distclean-so::
+distclean-static::
+distclean: clean distclean-so distclean-static distclean-rb-default distclean-rb
+		-$(Q)$(RM) Makefile $(RUBY_EXTCONF_H) conftest.* mkmf.log
+		-$(Q)$(RM) core ruby$(EXEEXT) *~ $(DISTCLEANFILES)
+		-$(Q)$(RMDIRS) $(DISTCLEANDIRS) 2> /dev/null || true
+
+realclean: distclean
+install: install-so install-rb
+
+install-so: $(DLLIB) $(TIMESTAMP_DIR)/.RUBYARCHDIR.time
+	$(INSTALL_PROG) $(DLLIB) $(RUBYARCHDIR)
+clean-static::
+	-$(Q)$(RM) $(STATIC_LIB)
+install-rb: pre-install-rb install-rb-default
+install-rb-default: pre-install-rb-default
+pre-install-rb: Makefile
+pre-install-rb-default: Makefile
+pre-install-rb-default:
+	@$(NULLCMD)
+$(TIMESTAMP_DIR)/.RUBYARCHDIR.time:
+	$(Q) $(MAKEDIRS) $(@D) $(RUBYARCHDIR)
+	$(Q) $(TOUCH) $@
+
+site-install: site-install-so site-install-rb
+site-install-so: install-so
+site-install-rb: install-rb
+
+.SUFFIXES: .c .m .cc .mm .cxx .cpp .o .S
+
+.cc.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -c $<
+
+.cc.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -S $<
+
+.mm.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -c $<
+
+.mm.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -S $<
+
+.cxx.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -c $<
+
+.cxx.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -S $<
+
+.cpp.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -c $<
+
+.cpp.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CXX) $(INCFLAGS) $(CPPFLAGS) $(CXXFLAGS) $(COUTFLAG)$@ -S $<
+
+.c.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CC) $(INCFLAGS) $(CPPFLAGS) $(CFLAGS) $(COUTFLAG)$@ -c $<
+
+.c.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CC) $(INCFLAGS) $(CPPFLAGS) $(CFLAGS) $(COUTFLAG)$@ -S $<
+
+.m.o:
+	$(ECHO) compiling $(<)
+	$(Q) $(CC) $(INCFLAGS) $(CPPFLAGS) $(CFLAGS) $(COUTFLAG)$@ -c $<
+
+.m.S:
+	$(ECHO) translating $(<)
+	$(Q) $(CC) $(INCFLAGS) $(CPPFLAGS) $(CFLAGS) $(COUTFLAG)$@ -S $<
+
+$(DLLIB): $(OBJS) Makefile
+	$(ECHO) linking shared-object $(DLLIB)
+	-$(Q)$(RM) $(@)
+	$(Q) $(LDSHAREDXX) -o $@ $(OBJS) $(LIBPATH) $(DLDFLAGS) $(LOCAL_LIBS) $(LIBS)
+
+
+
+$(OBJS): $(HDRS) $(ruby_headers)