emr_ohsp_interface 0.5.0 → 0.5.1

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: 474cd01fab975e0d16f3c70e36e86f5723f8e7ab41497537c9e301d8d1dcdef4
-  data.tar.gz: d949f4630492570b5a5dee8426492e23846498a629ab24cdaa77eb100ce95321
+  metadata.gz: 5b0a446ac067b3e70a193019ee45c89339716467f917d8a370bcbb1a223b75b6
+  data.tar.gz: b281e439cc147418468af783a1896940f5aa9d5311c85616dc6f57d1945cdfc2
 SHA512:
-  metadata.gz: b146539a2f7b8a50c6301f457d8d8f48fb3371da299ba4ea7f2e3cf327d473633d6f8cb414aa80e5f346f42d54936c2a6aa5d84664d07afe8d3c8658e286579c
-  data.tar.gz: a5a2eb25f4c916feb96bea06bbf2160b0a86ad4d08d14169d58c8f64f89bb2011a486ac6fb64d89b9e89b6f71cfe2aec701882c1a820e482d7a2a2a4a22ed12e
+  metadata.gz: a76ba192164398c65368d1b9ac19b67b74696e53f1f2df83cb8155f2f50cd496f9a98d512166c8afdc61ccae88a4c14bef99b5f932072e9b5e8750be364640c8
+  data.tar.gz: c225131968d0b931b1e15c0c8be724d2e7e754690c998426d186aa9517bac464a99e4b75af4eae5ef012d2939ee993f8bb240f8e37e36c551eb67a2500eb07d6

data/app/controllers/emr_ohsp_interface/emr_ohsp_interface_controller.rb

@@ -14,6 +14,10 @@ class EmrOhspInterface::EmrOhspInterfaceController < ::ApplicationController
     def generate_monthly_idsr_report
         render json: service.generate_monthly_idsr_report(params[:request],params[:start_date],params[:end_date]);
     end
+
+    def generate_hmis_15_report
+        render json: service.generate_hmis_15_report(params[:request],params[:start_date],params[:end_date]);
+    end
    
     def service
         EmrOhspInterface::EmrOhspInterfaceService

data/app/services/emr_ohsp_interface/emr_ohsp_interface_service.rb

@@ -180,6 +180,106 @@ module EmrOhspInterface
         return collection
       end
 
+      def generate_hmis_15_report(start_date=nil,end_date=nil)
+
+        diag_map = settings["hmis_15_map"]
+    
+        #pull the data
+        type = EncounterType.find_by_name 'Outpatient diagnosis'
+        collection = {}
+    
+        special_indicators = ["Malaria - new cases (under 5)",
+          "Malaria - new cases (5 & over)",
+          "HIV confirmed positive (15-49 years) new cases"
+        ]
+    
+        diag_map.each do |key,value|
+          options = {"ids"=>nil}
+          concept_ids = ConceptName.where(name: value).collect{|cn| cn.concept_id}
+    
+          if !special_indicators.include?(key)
+            data = Encounter.where('encounter_datetime BETWEEN ? AND ?
+            AND encounter_type = ? AND value_coded IN (?)
+            AND concept_id IN(6543, 6542)',
+            start_date.to_date.strftime('%Y-%m-%d 00:00:00'),
+            end_date.to_date.strftime('%Y-%m-%d 23:59:59'),type.id,concept_ids).\
+            joins('INNER JOIN obs ON obs.encounter_id = encounter.encounter_id
+            INNER JOIN person p ON p.person_id = encounter.patient_id').\
+            select('encounter.encounter_type, obs.value_coded, p.*')
+    
+            # #under_five
+            # under_five = data.select{|record| calculate_age(record["birthdate"]) < 5}.\
+            #             collect{|record| record.person_id}
+            # options["<5yrs"] = under_five
+            # #above 5 years
+            # over_five = data.select{|record| calculate_age(record["birthdate"]) >=5 }.\
+            #             collect{|record| record.person_id}
+    
+            # options[">=5yrs"] =  over_five
+    
+            all = data.collect{|record| record.person_id}
+    
+    
+            options["ids"] = all
+    
+            collection[key] = options
+          else
+            if key.eql?("Malaria - new cases (under 5)")
+              data = Encounter.where('encounter_datetime BETWEEN ? AND ?
+              AND encounter_type = ? AND value_coded IN (?)
+              AND concept_id IN(6543, 6542)',
+              start_date.to_date.strftime('%Y-%m-%d 00:00:00'),
+              end_date.to_date.strftime('%Y-%m-%d 23:59:59'),type.id,concept_ids).\
+              joins('INNER JOIN obs ON obs.encounter_id = encounter.encounter_id
+              INNER JOIN person p ON p.person_id = encounter.patient_id').\
+              select('encounter.encounter_type, obs.value_coded, p.*')
+    
+              under_five = data.select{|record| calculate_age(record["birthdate"]) < 5 }.\
+                            collect{|record| record["person_id"]}
+    
+              options["ids"] = under_five
+    
+              collection[key] = options
+    
+            end
+    
+            if key.eql?("Malaria - new cases (5 & over)")
+              data = Encounter.where('encounter_datetime BETWEEN ? AND ?
+              AND encounter_type = ? AND value_coded IN (?)
+              AND concept_id IN(6543, 6542)',
+              start_date.to_date.strftime('%Y-%m-%d 00:00:00'),
+              end_date.to_date.strftime('%Y-%m-%d 23:59:59'),type.id,concept_ids).\
+              joins('INNER JOIN obs ON obs.encounter_id = encounter.encounter_id
+              INNER JOIN person p ON p.person_id = encounter.patient_id').\
+              select('encounter.encounter_type, obs.value_coded, p.*')
+    
+              over_and_five = data.select{|record| calculate_age(record["birthdate"])  >= 5 }.\
+                            collect{|record| record["person_id"]}
+    
+              options["ids"] = over_and_five
+    
+              collection[key] = options
+            end
+    
+            if key.eql?("HIV confirmed positive (15-49 years) new cases")
+              data =  ActiveRecord::Base.connection.select_all(
+                "SELECT * FROM temp_earliest_start_date
+                  WHERE date_enrolled BETWEEN '#{start_date}' AND '#{end_date}'
+                  AND date_enrolled = earliest_start_date
+                  GROUP BY patient_id" ).to_hash
+    
+              over_and_15_49 = data.select{|record| calculate_age(record["birthdate"])  >= 15 && calculate_age(record["birthdate"]) <=49 }.\
+                     collect{|record| record["patient_id"]}
+    
+              options["ids"] = over_and_15_49
+    
+              collection[key] = options
+            end
+        end
+        end
+         collection
+      end
+
       # helper menthod
       def months_generator
           months = Hash.new

data/config/routes.rb

@@ -5,4 +5,5 @@ EmrOhspInterface::Engine.routes.draw do
     get '/get_months', to: 'emr_ohsp_interface#months_generator'
     get '/generate_weekly_idsr_report', to: 'emr_ohsp_interface#generate_weekly_idsr_report'
     get '/generate_monthly_idsr_report', to: 'emr_ohsp_interface#generate_monthly_idsr_report'
+    get '/generate_hmis_15_report', to: 'emr_ohsp_interface#generate_hmis_15_report'
 end

data/lib/emr_ohsp_interface/version.rb

@@ -1,3 +1,3 @@
 module EmrOhspInterface
-  VERSION = '0.5.0'
+  VERSION = '0.5.1'
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: emr_ohsp_interface
 version: !ruby/object:Gem::Version
-  version: 0.5.0
+  version: 0.5.1
 platform: ruby
 authors:
 - Justin Manda and Petros Kayange
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2021-12-02 00:00:00.000000000 Z
+date: 2022-01-06 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rails