elixir-toolkit-theme 1.25.0 → 1.26.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/README.md +3 -0
- data/_includes/affiliation-tiles-page.html +31 -0
- data/_includes/contributor-carousel-selection.html +44 -39
- data/_includes/contributor-minitiles-page.html +10 -2
- data/_includes/contributor-tiles-all.html +6 -1
- data/_includes/cookie-popup.html +2 -2
- data/_includes/resource-table-all.html +2 -2
- data/_includes/section-navigation-tiles-simple.html +2 -2
- data/_includes/section-navigation-tiles.html +8 -8
- data/_layouts/default.html +1 -1
- data/_layouts/page.html +1 -0
- data/_sass/_variables.scss +2 -2
- data/assets/css/main.scss +31 -9
- data/assets/js/main.js +1 -1
- metadata +3 -2
checksums.yaml
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 6ef4ebf40b6e201b710ec252b5333ab05e29a1ab2d498f3ae08a68eb070897f3
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data.tar.gz: df3e16d7a670713d0fe8e93547884721aad320d15e572749cbed49b96dabfc76
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 6a16e5224092c6774408a45a127c181a0f8e1683af2dfe139254faf8ce968ab09f8337deff75f010d9ca0ca9ea59b7c7465cb2ec9509f37cc59f7e72acdce583
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data.tar.gz: 8de88b386adcdd70a791627acea9d1fddd448115aa765b32f83b445e1cc7eff869673cc4a4aa5b9b84490017d13495bb4112ed5782d6e47baa9de06615a092dc
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data/README.md
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@@ -109,6 +109,9 @@ This will start the docker container and serve the website locally. Make sure th
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- [Applied Bioinformatics and Biostatistics intranet page](https://intranet.psb.ugent.be/abb/)
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- [FAIRDOM](https://fair-dom.org/)
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- [Australian BioCommons How-to-Guides](https://australianbiocommons.github.io/how-to-guides/)
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- [Norwegian Life Science RDM LookUp](https://elixir.no/rdm-lookup)
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- [ERIM Research Toolbox](https://eur-nl.github.io/erim-research-toolbox/)
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- [ELIXIR-UK Fellowship](https://elixir-uk-dash.github.io/rdmkit/)
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## Used packages
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{%- if page.affiliations and page.affiliations.size != 0 %}
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<span class="d-block h2-like fs-2">Affiliations</span>
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<div class="p-4 rounded mt-4 page-contributors d-flex flex-wrap gap-2">
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{%- assign affiliations = site.data.affiliations %}
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{%- assign page_affiliations = page.affiliations | sort %}
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{%- assign allcountries = site.data.countries %}
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{%- for affiliation in page_affiliations %}
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{%- if affiliation.size == 2 %}
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{%- assign country = affiliation | upcase %}
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{%- assign country_link = site.pages | where:"country_code",country | first %}
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{%- if country_link %}
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<a role="button" href="{{country_link.url | relative_url}}" data-bs-toggle="tooltip" title="{{allcountries[country]}}" class="btn btn-sm d-flex align-items-center contributor-link hover-primary">
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{%- else %}
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<a role="button" data-bs-toggle="tooltip" title="{{allcountries[country]}}" class="btn btn-sm contributor-link d-flex align-items-center hover-primary disabled border-white" aria-disabled="true">
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{%- endif %}
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<div class="d-flex justify-content-center affiliation-flag">
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<div class="ratio ratio-4x3">
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<div class="rounded shadow-sm flag-icon flag-icon-{{affiliation | downcase}}">
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</div>
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</div>
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</div>
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</a>
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{%- else %}
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{%- assign affiliation_info = affiliations | where:"name",affiliation | first %}
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<a class="btn btn-sm contributor-link d-flex align-items-center justify-content-center hover-primary" data-bs-toggle="tooltip" title="{{affiliation_info.name}}" href="{{affiliation_info.url}}">
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<img src="{{affiliation_info.image_url | relative_url}}" alt="{{affiliation_info.name}}" class="affiliation-img">
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</a>
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{%- endif %}
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{%- endfor %}
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</div>
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{%- endif %}
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{%- assign allcontrstr = allcontrstr | append: ", " | append: pagecontr %}
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{%- else %}
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{%- assign allcontrstr = allcontrstr | append: pagecontr %}
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{%- endif
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{%- endif
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{%- endif %}
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{%- endif %}
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{%- endfor %}
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{%- for contr in contributors %}
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{%- assign allcontrstr = allcontrstr | append: ", " | append: contr[0] %}
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{%- endfor %}
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{%- assign allcontributors = allcontrstr | split: ", " | uniq | sort %}
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{%- endif
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{%- endif %}
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<div id="contributors-carousel" class="carousel carousel-dark slide my-4" data-ride="carousel" data-bs-interval="7000">
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<div class="carousel-inner">
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{%- assign counter = 0 %}
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{%- for contributor in allcontributors %}
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{%- capture modulo %}{{ counter | modulo:nr }}{% endcapture %}
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{%- if modulo == '0' or counter == 0 %}
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{%- if counter != 0 %}
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</div>
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</div>
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{%- endif %}
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<div class="carousel-item {% if counter == 0 %}active{% endif %}">
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<div class="row row-cols-5 contributor-cards g-1 g-sm-4 ">
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{%- endif %}
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<div class="col">
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<div class="card h-100">
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{%- assign id = contributors[contributor].git | default: 'no_github' %}
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<div>
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{%- if contributors[contributor].image_url %}
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<
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<div class="p-3">
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<div class="ratio ratio-1x1">
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<div class="contr-placeholder rounded-circle" style="background-image: url({{ contributors[contributor].image_url }});">
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</div>
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</div>
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</div>
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{%- else %}
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{%- if contributors[contributor].git %}
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<img src="https://avatars.githubusercontent.com/{{id}}" class="card-img-top p-3 rounded-circle" alt="{{ contributor }}">
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{%- else %}
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<div class="p-3">
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<div class="ratio ratio-1x1">
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<div class="contr-placeholder rounded-circle d-flex justify-content-center align-items-center">
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{%- assign contr_name = contributor | split: " " %}
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{%- assign initials = "" %}
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{%- for name in contr_name %}
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{%- assign initial = name | slice: 0,1 | capitalize %}
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{%- assign initials = initials | append: initial %}
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{%- endfor %}
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<span class="fs-2 fw-bold">{{ initials }}</span>
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</div>
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</div>
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</div>
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</div>
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{%- endif %}
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{%- endif %}
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</div>
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</div>
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{%- endif %}
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</div>
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</div>
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</div>
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{%- assign counter = counter | plus:1 %}
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{%- if forloop.last %}
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</div>
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{%- endif %}
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{%- endfor %}
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</div>
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{%- endif %}
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{%- endfor %}
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</div>
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<button class="carousel-control-prev" type="button" data-bs-target="#contributors-carousel" data-bs-slide="prev">
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<span class="carousel-control-prev-icon" aria-hidden="true"></span>
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<span class="visually-hidden">Previous</span>
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</button>
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<button class="carousel-control-next" type="button" data-bs-target="#contributors-carousel" data-bs-slide="next">
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<span class="carousel-control-next-icon" aria-hidden="true"></span>
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<span class="visually-hidden">Next</span>
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</button>
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</div>
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</div>
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<button class="btn btn-sm dropdown-toggle contributor-link d-flex gap-2 align-items-center hover-primary position-relative" type="button" data-bs-toggle="dropdown" aria-expanded="false" data-bs-auto-close="outside" data-bs-offset="0,10">
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<div>
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{%- if contributors[contributor].image_url %}
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<div class="ratio ratio-1x1 contributor-img-sm">
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<div class="contr-placeholder rounded-circle" style="background-image: url({{ contributors[contributor].image_url }});">
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</div>
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</div>
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{%- else %}
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{%- if contributors[contributor].git %}
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<img class="img-fluid rounded-circle contributor-img-sm" src="https://avatars.githubusercontent.com/{{ id }}" alt="Avatar of the contributor {{ contributor }}">
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{%- assign id = contributors[contributor].git | default: 'no_github' %}
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<div class="position-relative">
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{%- if contributors[contributor].image_url %}
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<div class="p-3">
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<div class="ratio ratio-1x1">
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<div class="contr-placeholder rounded-circle" style="background-image: url({{ contributors[contributor].image_url }});">
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</div>
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</div>
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</div>
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{%- else %}
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{%- if contributors[contributor].git %}
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<img src="https://avatars.githubusercontent.com/{{id}}" class="card-img-top p-3 rounded-circle" alt="{{ contributor }}">
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{%- assign id = contributors[contributor].git | default: 'no_github' %}
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<div class="position-relative">
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{%- if contributors[contributor].image_url %}
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<
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<div class="p-3">
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<div class="ratio ratio-1x1">
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<div class="contr-placeholder rounded-circle" style="background-image: url({{ contributors[contributor].image_url }});">
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</div>
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</div>
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</div>
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{%- else %}
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{%- if contributors[contributor].git %}
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<img src="https://avatars.githubusercontent.com/{{id}}" class="card-img-top p-3 rounded-circle" alt="{{ contributor }}">
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data/_includes/cookie-popup.html
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We use cookies to ensure you get the best experience on our website. Read our
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<a class="fw-bold" href="{{ site.theme_variables.privacy_statement_url | default: '/privacy' | relative_url}}">privacy policy</a> to find out more.
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</p>
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<div class="d-flex justify-content-center">
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<button type="button" id="acceptcookies" class="btn btn-primary">
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Got it!
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</button>
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</div>
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{%- assign hide_ids = hide_ids | append: " " | append: tool_id %}
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<tr {% unless include.tag==nil %} class="collapse multi-collapse" id="{{tool_id}}" {% endunless %}>
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{% if tool.url %}
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<td><a href="{{tool.url}}">{{tool.name}}</a><a href="{{country_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{country_page.title}}"><span class="flag-icon ms-2 flag-icon-{{country_page.country_code | downcase }}"></span></a></td>
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<td><a href="{{tool.url}}">{{tool.name}}</a><a href="{{country_page.url | relative_url }}" data-bs-toggle="tooltip" title="{{country_page.title}}"><span class="flag-icon ms-2 shadow-sm flag-icon-{{country_page.country_code | downcase }}"></span></a></td>
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{%- else %}
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<td>{{tool.name}}<a href="{{country_page.url}}"><span class="flag-icon ms-2 flag-icon-{{country_page.country_code | downcase }}"></span></a></td>
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<td>{{tool.name}}<a href="{{country_page.url}}"><span class="flag-icon ms-2 shadow-sm flag-icon-{{country_page.country_code | downcase }}"></span></a></td>
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{%- endif %}
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<td>{{tool.description | markdownify }}
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{%- if tool.instance_of or tool.how_to_access %}
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{%- assign allcountries = site.data.countries %}
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{%- assign except = include.except | split: ", " %}
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<div class="row row-cols-1 row-cols-md-2 g-3
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<div class="row row-cols-1 row-cols-md-2 g-3 my-4 navigation-tiles">
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{%- for current_page in site.pages | sorted %}
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{%- if current_page.title and current_page.search_exclude != true and current_page.type == include.type %}
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{%- unless except contains current_page.name %}
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<div class="col d-grid">
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<a role="button" class="btn bg-light py-4 fs-3 hover-primary" href="{{ current_page.url | relative_url }}">{{current_page.title}}<span class="flag-icon ms-3 flag-icon-{{current_page.country_code | downcase }}"></span
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<a role="button" class="btn bg-light py-4 fs-3 hover-primary" href="{{ current_page.url | relative_url }}">{{current_page.title}}{% if current_page.country_code %}<span class="flag-icon shadow-sm ms-3 flag-icon-{{current_page.country_code | downcase }}"></span>{% endif %}</a>
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</div>
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{% endunless %}
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{%- endif %}
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{%- assign country_link = site.pages | where:"country_code",country | first %}
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{%- if country_link %}
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<a role="button" href="{{country_link.url | relative_url}}" data-bs-toggle="tooltip" title="{{allcountries[country]}}" class="btn btn-sm bg-white hover-primary">
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{%- else %}
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<a role="button" data-bs-toggle="tooltip" title="{{allcountries[country]}}" class="btn btn-sm bg-white hover-primary disabled border-white" aria-disabled="true">
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{%- endif %}
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<div class="d-block affiliation-img-sm">
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<span class="flag-icon flag-icon-{{affiliation | downcase}} shadow-sm"></span>
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</div>
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</a>
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{%- elsif filter_affiliation %}
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<a role="button" href="{{filter_affiliation.url}}" data-bs-toggle="tooltip" data-bs-original-title="{{affiliation}}" class="btn btn-sm bg-white hover-primary">
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{%- if filter_affiliation.image_url %}
|
|
159
|
-
<img alt="logo of {{filter_affiliation.name}}" src="{{filter_affiliation.image_url | relative_url }}" class="d-inline
|
|
159
|
+
<img alt="logo of {{filter_affiliation.name}}" src="{{filter_affiliation.image_url | relative_url }}" class="d-inline affiliation-img-sm">
|
|
160
160
|
{%- else %}
|
|
161
161
|
{{filter_affiliation.name}}
|
|
162
162
|
{%- endif %}
|
data/_layouts/default.html
CHANGED
|
@@ -10,7 +10,7 @@
|
|
|
10
10
|
<div class="row gx-0 gx-lg-5">
|
|
11
11
|
{%- assign content_col_size = "col-lg-12" %}{% unless page.hide_sidebar %}
|
|
12
12
|
<!-- Sidebar Column -->
|
|
13
|
-
<div class="col-lg-3">
|
|
13
|
+
<div class="col-lg-3 mb-0 mb-lg-4">
|
|
14
14
|
{% include sidebar.html %}
|
|
15
15
|
</div>
|
|
16
16
|
{%- assign content_col_size = "col-lg-9" %}{% endunless %}
|
data/_layouts/page.html
CHANGED
|
@@ -27,6 +27,7 @@ layout: default
|
|
|
27
27
|
{%- if page.page_id %}
|
|
28
28
|
{% include resource-table-all.html tag=page.page_id %}
|
|
29
29
|
{%- endif %}
|
|
30
|
+
{% include affiliation-tiles-page.html %}
|
|
30
31
|
{% include contributor-minitiles-page.html %}
|
|
31
32
|
{%- if site.theme_variables.github_buttons.position == "bottom" %}
|
|
32
33
|
<div id="github-buttons-wrapper" class="d-flex mt-5">
|
data/_sass/_variables.scss
CHANGED
|
@@ -28,11 +28,11 @@ $sidebar-color-active: $white;
|
|
|
28
28
|
$toc-bg: $light;
|
|
29
29
|
|
|
30
30
|
/*-----Section navigation tiles-----*/
|
|
31
|
-
$nav-card-bg: $
|
|
31
|
+
$nav-card-bg: $light;
|
|
32
32
|
$nav-card-header-bg: $secondary;
|
|
33
33
|
$nav-card-header-color: $white;
|
|
34
34
|
$nav-card-badge-color: $body-color;
|
|
35
|
-
$nav-card-badge-bg: $
|
|
35
|
+
$nav-card-badge-bg: $white;
|
|
36
36
|
$nav-card-badge-color-hover: $white;
|
|
37
37
|
$nav-card-badge-bg-hover: $primary;
|
|
38
38
|
|
data/assets/css/main.scss
CHANGED
|
@@ -6,6 +6,7 @@ permalink: assets/css/main.css
|
|
|
6
6
|
/*-----Default theme variables-----*/
|
|
7
7
|
$popover-max-width: 12em;
|
|
8
8
|
$enable-caret: false;
|
|
9
|
+
$card-border-width: 0;
|
|
9
10
|
|
|
10
11
|
/*-----Include other SASS files-----*/
|
|
11
12
|
|
|
@@ -128,7 +129,6 @@ pre {
|
|
|
128
129
|
code {
|
|
129
130
|
padding: 0;
|
|
130
131
|
background-color: transparent;
|
|
131
|
-
|
|
132
132
|
}
|
|
133
133
|
}
|
|
134
134
|
|
|
@@ -137,7 +137,7 @@ div.highlight {
|
|
|
137
137
|
color: $body-color;
|
|
138
138
|
border: 1px solid $border-color;
|
|
139
139
|
border-radius: $border-radius;
|
|
140
|
-
margin
|
|
140
|
+
margin: $spacer 0;
|
|
141
141
|
pre {
|
|
142
142
|
margin-bottom: 0;
|
|
143
143
|
padding: $spacer;
|
|
@@ -495,8 +495,11 @@ footer {
|
|
|
495
495
|
}
|
|
496
496
|
|
|
497
497
|
#ett-logo {
|
|
498
|
+
transition: color .15s ease-in-out;
|
|
499
|
+
|
|
498
500
|
.cls-1 {
|
|
499
501
|
fill: $footer-ett;
|
|
502
|
+
transition: fill .15s ease-in-out;
|
|
500
503
|
}
|
|
501
504
|
&:hover {
|
|
502
505
|
.cls-1 {
|
|
@@ -510,7 +513,6 @@ footer {
|
|
|
510
513
|
/*-----Back to top-----*/
|
|
511
514
|
|
|
512
515
|
#back-to-top {
|
|
513
|
-
transition: 0.3s ease-in-out;
|
|
514
516
|
position: fixed;
|
|
515
517
|
bottom: -50px;
|
|
516
518
|
right: $spacer;
|
|
@@ -540,9 +542,6 @@ footer {
|
|
|
540
542
|
color: $primary;
|
|
541
543
|
font-size: 0.8em;
|
|
542
544
|
}
|
|
543
|
-
.contr-placeholder {
|
|
544
|
-
background-color: rgba($dark, 0.1);
|
|
545
|
-
}
|
|
546
545
|
}
|
|
547
546
|
|
|
548
547
|
/*-----Contributors carousel-----*/
|
|
@@ -567,6 +566,18 @@ footer {
|
|
|
567
566
|
}
|
|
568
567
|
}
|
|
569
568
|
|
|
569
|
+
/*-----Contributor url image-----*/
|
|
570
|
+
|
|
571
|
+
.contr-placeholder {
|
|
572
|
+
background-color: rgba($dark, 0.1);
|
|
573
|
+
background-position: center;
|
|
574
|
+
background-repeat: no-repeat;
|
|
575
|
+
-webkit-background-size: cover;
|
|
576
|
+
-moz-background-size: cover;
|
|
577
|
+
-o-background-size: cover;
|
|
578
|
+
background-size: cover;
|
|
579
|
+
}
|
|
580
|
+
|
|
570
581
|
/*-----------Social icons----------*/
|
|
571
582
|
|
|
572
583
|
.social-icons {
|
|
@@ -621,7 +632,6 @@ footer {
|
|
|
621
632
|
}
|
|
622
633
|
|
|
623
634
|
.contr-placeholder {
|
|
624
|
-
background-color: rgba($dark, 0.1);
|
|
625
635
|
font-size: 0.5rem;
|
|
626
636
|
}
|
|
627
637
|
}
|
|
@@ -674,12 +684,24 @@ footer {
|
|
|
674
684
|
color: $primary !important;
|
|
675
685
|
}
|
|
676
686
|
|
|
677
|
-
/*-----
|
|
687
|
+
/*-----Affiliation sizes-----*/
|
|
678
688
|
|
|
679
|
-
.
|
|
689
|
+
.affiliation-img-sm {
|
|
680
690
|
height: 24px;
|
|
681
691
|
}
|
|
682
692
|
|
|
693
|
+
.affiliation-img {
|
|
694
|
+
height: 60px;
|
|
695
|
+
}
|
|
696
|
+
|
|
697
|
+
.affiliation-flag {
|
|
698
|
+
width: 60px;
|
|
699
|
+
}
|
|
700
|
+
|
|
701
|
+
.affiliation-flag .ratio {
|
|
702
|
+
width: 40px;
|
|
703
|
+
}
|
|
704
|
+
|
|
683
705
|
/*-----News and events-----*/
|
|
684
706
|
|
|
685
707
|
li.upcoming_event,
|
data/assets/js/main.js
CHANGED
|
@@ -126,7 +126,7 @@ $(document).ready(function () {
|
|
|
126
126
|
var btn = document.createElement('button');
|
|
127
127
|
var div = document.createElement('div');
|
|
128
128
|
btn.innerHTML = '<i class="fa-regular fa-copy"></i>';
|
|
129
|
-
btn.className = "btn
|
|
129
|
+
btn.className = "btn text-secondary m-1 btn-copy py-1 px-2";
|
|
130
130
|
btn.title = "Copy to clipboard";
|
|
131
131
|
btn.type = "button";
|
|
132
132
|
btn.setAttribute("data-bs-toggle", "tooltip");
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: elixir-toolkit-theme
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 1.
|
|
4
|
+
version: 1.26.0
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- bedroesb
|
|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date: 2023-
|
|
11
|
+
date: 2023-04-25 00:00:00.000000000 Z
|
|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: jekyll
|
|
@@ -63,6 +63,7 @@ extra_rdoc_files: []
|
|
|
63
63
|
files:
|
|
64
64
|
- LICENSE
|
|
65
65
|
- README.md
|
|
66
|
+
- _includes/affiliation-tiles-page.html
|
|
66
67
|
- _includes/affiliation-tiles-selection.html
|
|
67
68
|
- _includes/callout.html
|
|
68
69
|
- _includes/contributor-carousel-selection.html
|