dwca_hunter 0.5.4 → 0.5.5
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/.ruby-version +1 -1
- data/Gemfile.lock +1 -1
- data/lib/dwca_hunter/resources/arctos.rb +10 -14
- data/lib/dwca_hunter/version.rb +1 -1
- metadata +1 -1
checksums.yaml
CHANGED
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@@ -1,7 +1,7 @@
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---
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SHA256:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 200857d1971d198dfe5a7f048a1eab71cfb295f96cff9e3164d5d62486e26431
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4
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data.tar.gz: 87a07aa3c9006857c1876fa017436921621889ff833e2eb8d499d853dbe243d1
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SHA512:
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metadata.gz:
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data.tar.gz:
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metadata.gz: 5aeef02ffb2e3f366aef826c7492c5acb23a7aa4fd57ec3dd8fec513176d919c306e289aaa3e678a8b629a81630da2dcd3c3b42b6259fba3aa04b971b0b6e489
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7
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data.tar.gz: c20a2dd504367154582297754fcb594a372484aa67944c8cff25bf56f1df571069fd634169d9f9ef7a3c4a708bca276dbcd413786b1de663ea0fbfc36078c7b0
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data/.ruby-version
CHANGED
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@@ -1 +1 @@
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1
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-
2.6.
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2.6.5
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data/Gemfile.lock
CHANGED
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@@ -39,9 +39,9 @@ module DwcaHunter
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def get_names
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Dir.chdir(@download_dir)
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collect_names
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collect_synonyms
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collect_vernaculars
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collect_names
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end
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def collect_vernaculars
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@@ -69,10 +69,10 @@ module DwcaHunter
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canonical = row['scientific_name']
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if @synonyms_hash.has_key?(canonical)
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@synonyms_hash[canonical] <<
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{
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{ name_string: row['related_name'], status: row['TAXON_RELATIONSHIP']}
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else
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@synonyms_hash[canonical] = [
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{
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{ name_string: row['related_name'], status: row['TAXON_RELATIONSHIP']}
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]
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end
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puts "Processed %s synonyms" % i if i % 10000 == 0
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@@ -103,7 +103,7 @@ module DwcaHunter
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subspecies = row['subspecies']
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code = row['nomenclatural_code']
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taxon_id = "ARCT_#{i}"
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taxon_id = "ARCT_#{i+1}"
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@names << { taxon_id: taxon_id,
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name_string: name_string,
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kingdom: kingdom,
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@@ -124,14 +124,15 @@ module DwcaHunter
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def update_vernacular(taxon_id, canonical)
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return unless @vernaculars_hash.has_key?(canonical)
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@vernaculars_hash[canonical].each do |vern|
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@vernaculars <<
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@vernaculars << { taxon_id: taxon_id, vern: vern }
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end
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end
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def update_synonym(taxon_id, canonical)
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return unless @synonyms_hash.has_key?(canonical)
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@synonyms_hash[canonical].each do |syn|
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@synonyms <<
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@synonyms << { taxon_id: taxon_id, name_string: syn[:name_string],
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status: syn[:status] }
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end
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end
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@@ -139,7 +140,6 @@ module DwcaHunter
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DwcaHunter::logger_write(self.object_id,
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'Creating DarwinCore Archive file')
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@core = [['http://rs.tdwg.org/dwc/terms/taxonID',
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'http://globalnames.org/terms/localID',
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'http://rs.tdwg.org/dwc/terms/scientificName',
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'http://rs.tdwg.org/dwc/terms/kingdom',
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'http://rs.tdwg.org/dwc/terms/phylum',
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@@ -150,7 +150,7 @@ module DwcaHunter
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'http://rs.tdwg.org/dwc/terms/nomenclaturalCode',
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]]
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@names.each do |n|
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@core << [n[:taxon_id], n[:
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@core << [n[:taxon_id], n[:name_string],
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n[:kingdom], n[:phylum], n[:klass], n[:order], n[:family],
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n[:genus], n[:code]]
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end
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@@ -162,23 +162,19 @@ module DwcaHunter
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row_type: 'http://rs.gbif.org/terms/1.0/VernacularName' }
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@vernaculars.each do |v|
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@extensions[-1][:data] << [v[:taxon_id], v[:
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@extensions[-1][:data] << [v[:taxon_id], v[:vern]]
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end
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@extensions << {
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data: [[
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'http://rs.tdwg.org/dwc/terms/taxonID',
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'http://globalnames.org/terms/localID',
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'http://rs.tdwg.org/dwc/terms/scientificName',
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'http://rs.tdwg.org/dwc/terms/taxonomicStatus',
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]],
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file_name: 'synonyms.txt',
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}
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-
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@synonyms.each do |s|
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@extensions[-1][:data] << [
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s[:taxon_id], s[:local_id],
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s[:name_string], s[:taxonomic_status]]
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@extensions[-1][:data] << [s[:taxon_id], s[:name_string], s[:status]]
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end
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@eml = {
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id: @uuid,
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data/lib/dwca_hunter/version.rb
CHANGED