cql_qdm_patientapi 1.0.1 → 1.0.2

checksums.yaml

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data/.github/CONTRIBUTING.md

@@ -0,0 +1,14 @@
+# :clipboard: CQL QDM Patient API contribution rules
+1. All tickets relating to a pull request must link to the pull request.
+2. All pull requests must link to their parent tickets.
+3. All pull requests must have accompanying tests. This means:
+    * Automated tests: Automated tests are expected unless they are not feasible. If they are not feasible, this should be explained in the pull request.
+    * A JIRA test should be included if the automated tests are not sufficient
+        - The JIRA test should link to the pull request
+        - The JIRA test should link to the tasks that were resolved by the pull request
+    * A pull request review also includes a review of the accompanying tests tests
+4. All pull requests must pass a calculation regression test to confirm that calculations do not break with these changes
+
+:clipboard: For more details see: https://gitlab.mitre.org/bonnie/internal-documentation/wikis/pull-requests
+
+As a reviewer of a pull request, you are accountable to verifying that the PR contains all items. :punch:

data/.github/PULL_REQUEST_TEMPLATE.md

@@ -0,0 +1,45 @@
+Pull requests into CQL QDM Patient API require the following. Submitter and reviewer should :white_check_mark: when done. For items that are not-applicable, note it's not-applicable ("N/A") and :white_check_mark:.
+
+**Submitter:**
+- [ ] This pull request describes why these changes were made.
+- [ ] This PR is into the correct branch.
+- [ ] JIRA ticket for this PR:
+- [ ] JIRA ticket links to this PR
+- [ ] Code diff has been done and been reviewed (it **does not** contain: additional white space, not applicable code changes, debug statements, etc.)
+- [ ] Tests are included and test edge cases
+- [ ] Tests have been run locally and pass (remember to update Gemfile when applicable)
+- [ ] Code coverage has not gone down and all code touched or added is covered.
+    * In rare situations, this may not be possible or applicable to a PR. In those situations:
+        1. Note why this could not be done or is not applicable here:
+        2. Add TODOs in the code noting that it requires a test
+        3. Add a JIRA task to add the test and link it here:
+- [ ] Automated regression test(s) pass
+
+If JIRA tests were used to supplement or replace automated tests:
+- [ ] JIRA test links:
+- [ ] Justification for using JIRA tests:
+- [ ] JIRA tests have been added to sprint
+
+
+**Reviewer 1:**
+
+Name:
+- [ ] Code is maintainable and reusable, reuses existing code and infrastructure where appropriate, and accomplishes the task’s purpose
+- [ ] The tests appropriately test the new code, including edge cases
+- [ ] You have tried to break the code
+
+If JIRA tests were used to supplement or replace automated tests:
+- [ ] JIRA tests have been run and pass
+- [ ] You agree with the justification for use of JIRA tests or have provided input on why you disagree
+
+
+**Reviewer 2:**
+
+Name:
+- [ ] Code is maintainable and reusable, reuses existing code and infrastructure where appropriate, and accomplishes the task’s purpose
+- [ ] The tests appropriately test the new code, including edge cases
+- [ ] You have tried to break the code
+
+If JIRA tests were used to supplement or replace automated tests:
+- [ ] JIRA tests have been run and pass
+- [ ] You agree with the justification for use of JIRA tests or have provided input on why you disagree

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    cql_qdm_patientapi (1.0.1)
+    cql_qdm_patientapi (1.0.2)
       coffee-rails (~> 4.1)
       rails (~> 4.2)
       sprockets-rails (~> 2.3)
@@ -124,4 +124,4 @@ DEPENDENCIES
   teaspoon-jasmine (= 2.3.4)
 
 BUNDLED WITH
-   1.16.0
+   1.16.1

data/app/assets/javascripts/cqlpatient.js.coffee

@@ -104,6 +104,12 @@ class CQL_QDM.CQLPatient
     else if /PatientCharacteristicExpired/.test profile
       # Requested deathdate
       [new CQL_QDM.PatientCharacteristicExpired(@_patient)]
+    else if /PatientCharacteristicRace/.test profile
+      # Requested race
+      [new CQL_QDM.PatientCharacteristicRace(@_patient)]
+    else if /PatientCharacteristicEthnicity/.test profile
+      # Requested ethnicity
+      [new CQL_QDM.PatientCharacteristicEthnicity(@_patient)]
     else
       # Check if there are PatientCharateristic qdm datatypes that can be returned
       profile = profile.replace(/ *\{[^)]*\} */g, '')

data/app/assets/javascripts/datatypes/patient_characteristic_ethnicity.js.coffee

@@ -0,0 +1,23 @@
+###
+@namespace scoping into the CQL_QDM namespace (all classes and
+their methods will be accessable through the CQL_QDM namespace)
+###
+@CQL_QDM ||= {}
+
+
+###
+Used to represent a ethnicity.
+###
+class CQL_QDM.PatientCharacteristicEthnicity extends CQL_QDM.QDMDatatype
+  ###
+  @param {Object} patient - the HDS patient object to use
+  ###
+  constructor: (patient) ->
+    @_patient = patient
+
+
+  getCode: ->
+    if @_patient?.has('ethnicity')
+      code: @_patient.get('ethnicity')
+    else
+      null

data/app/assets/javascripts/datatypes/patient_characteristic_race.js.coffee

@@ -0,0 +1,23 @@
+###
+@namespace scoping into the CQL_QDM namespace (all classes and
+their methods will be accessable through the CQL_QDM namespace)
+###
+@CQL_QDM ||= {}
+
+
+###
+Used to represent a race.
+###
+class CQL_QDM.PatientCharacteristicRace extends CQL_QDM.QDMDatatype
+  ###
+  @param {Object} patient - the HDS patient object to use
+  ###
+  constructor: (patient) ->
+    @_patient = patient
+
+
+  getCode: ->
+    if @_patient?.has('race')
+      code: @_patient.get('race')
+    else
+      null

data/lib/cql_qdm_patientapi/version.rb

@@ -1,3 +1,3 @@
 module CqlQdmPatientapi
-  VERSION = "1.0.1"
+  VERSION = "1.0.2"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: cql_qdm_patientapi
 version: !ruby/object:Gem::Version
-  version: 1.0.1
+  version: 1.0.2
 platform: ruby
 authors:
 - The MITRE Corporation
 autorequire: 
 bindir: exe
 cert_chain: []
-date: 2017-12-01 00:00:00.000000000 Z
+date: 2018-02-15 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: rails
@@ -59,6 +59,8 @@ executables: []
 extensions: []
 extra_rdoc_files: []
 files:
+- ".github/CONTRIBUTING.md"
+- ".github/PULL_REQUEST_TEMPLATE.md"
 - ".gitignore"
 - ".travis.yml"
 - Gemfile
@@ -88,8 +90,10 @@ files:
 - app/assets/javascripts/datatypes/laboratorytest.js.coffee
 - app/assets/javascripts/datatypes/medication.js.coffee
 - app/assets/javascripts/datatypes/patient_characteristic.js.coffee
+- app/assets/javascripts/datatypes/patient_characteristic_ethnicity.js.coffee
 - app/assets/javascripts/datatypes/patient_characteristic_expired.js.coffee
 - app/assets/javascripts/datatypes/patient_characteristic_payer.js.coffee
+- app/assets/javascripts/datatypes/patient_characteristic_race.js.coffee
 - app/assets/javascripts/datatypes/patient_characteristic_sex.js.coffee
 - app/assets/javascripts/datatypes/physicalexam.js.coffee
 - app/assets/javascripts/datatypes/procedure.js.coffee
@@ -126,7 +130,7 @@ required_rubygems_version: !ruby/object:Gem::Requirement
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 2.6.12
+rubygems_version: 2.6.14
 signing_key: 
 specification_version: 4
 summary: QDM CQL execution engine and HDS patient model interface