coderunner 0.16.18 → 0.16.19

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 24e1d40b5039aa83c1f523978438f2dd68011b6c
-  data.tar.gz: 5a03886c56b241ae3e990ba1b5eda9c529ad0cd8
+  metadata.gz: 72930ce4dd1fb18fc037992914665d924a285358
+  data.tar.gz: 0b72724ad98ba0948b68415ac92c828fd53c4871
 SHA512:
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+  metadata.gz: e296ab114aab78403321c33e7a6c101df67dfa3b44c8df523182abddda7d104091a7ff71195916b47db78d9c1ad516ef64157dfddef9f374b66a2e493299d190
+  data.tar.gz: 2f0895e8e1ebf20b2d480c7a353d95b5b19b4166e76cef28823404849f30d625a384c67b53a9647b1e287e51da806f71d17e37e74cf01bffa25b41865857da1b

data/VERSION

@@ -1 +1 @@
-0.16.18
+0.16.19

data/coderunner.gemspec

@@ -2,17 +2,17 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Jeweler::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: coderunner 0.16.18 ruby lib
+# stub: coderunner 0.16.19 ruby lib
 # stub: ext/extconf.rb
 
 Gem::Specification.new do |s|
   s.name = "coderunner"
-  s.version = "0.16.18"
+  s.version = "0.16.19"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib"]
   s.authors = ["Edmund Highcock"]
-  s.date = "2015-07-20"
+  s.date = "2015-07-21"
   s.description = "CodeRunner is a framework for the automated running and analysis of simulations. It automatically generates any necessary input files, organises the output data and analyses it. Because it is a modular system, it can easily be customised to work with any system and any simulation code. One of its greatest strengths is that it is independent of any one simulation code; thus it can easily plot and compare the data from different codes."
   s.email = "edmundhighcock@sourceforge.net"
   s.executables = ["coderunner", "coderunnerrepo"]

data/lib/coderunner/repository.rb

@@ -265,7 +265,10 @@ EOF
     def pull(remote)
       namehost, folder, _barefolder = split_url(remote.name)
       try_system %[ssh #{namehost} "cd #{folder} && git push origin"]
-      bare_repo.fetch(remote)
+      Dir.chdir(bare_repo.repo.to_s) do
+        try_system("git fetch #{remote.name} master:master")
+      end
+      #bare_repo.fetch(remote)
       simple_pull(remote('origin'))
     end
     # A simple git push... does not try to push to local 

data/lib/coderunner/system_modules/archer.rb

@@ -15,6 +15,7 @@ class CodeRunner
 	#PBS -l select=#{nodes}
 	#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}
 	#{@project ? "#PBS -A #@project" : ""}
+	#{@queue ? "#PBS -q #@queue" : ""}
 
 	### start of jobscript 
 	cd $PBS_O_WORKDIR 

data/lib/coderunner/system_modules/moab.rb

@@ -97,6 +97,7 @@ module Moab
 	#PBS -l mppnppn=#{ppn}
 	#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}
 	#{@project ? "#PBS -A #@project" : ""}
+	#{@queue ? "#PBS -q #@queue" : ""}
 
 	### start of jobscript 
 	cd $PBS_O_WORKDIR 

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: coderunner
 version: !ruby/object:Gem::Version
-  version: 0.16.18
+  version: 0.16.19
 platform: ruby
 authors:
 - Edmund Highcock
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2015-07-20 00:00:00.000000000 Z
+date: 2015-07-21 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: graphkit