coderunner 0.13.23 → 0.13.24

data/VERSION

@@ -1 +1 @@
-0.13.23
+0.13.24

data/coderunner.gemspec

@@ -5,11 +5,11 @@
 
 Gem::Specification.new do |s|
   s.name = "coderunner"
-  s.version = "0.13.23"
+  s.version = "0.13.24"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Edmund Highcock"]
-  s.date = "2013-10-21"
+  s.date = "2013-11-14"
   s.description = "CodeRunner is a framework for the automated running and analysis of simulations. It automatically generates any necessary input files, organises the output data and analyses it. Because it is a modular system, it can easily be customised to work with any system and any simulation code. One of its greatest strengths is that it is independent of any one simulation code; thus it can easily plot and compare the data from different codes."
   s.email = "edmundhighcock@sourceforge.net"
   s.executables = ["coderunner"]
@@ -48,6 +48,7 @@ Gem::Specification.new do |s|
     "lib/coderunner/merged_code_runner.rb",
     "lib/coderunner/remote_code_runner.rb",
     "lib/coderunner/run.rb",
+    "lib/coderunner/system_modules/archer.rb",
     "lib/coderunner/system_modules/blue_joule.rb",
     "lib/coderunner/system_modules/dirac.rb",
     "lib/coderunner/system_modules/edison.rb",

data/lib/coderunner/system_modules/archer.rb

@@ -0,0 +1,37 @@
+class CodeRunner
+	require SCRIPT_FOLDER + '/system_modules/moab.rb'
+	module Hector
+		include Moab
+
+		def batch_script
+			raise "Please specify project" unless @project
+			(eputs "Warning: number of wall mins is not recommended (20, 60, 180, 360, 720 recomended)"; sleep 0.2) unless [20, 60, 180, 360, 720].include? @wall_mins.to_i
+
+		ppn_checks
+		hours, mins, secs = hours_minutes_seconds
+<<EOF
+	#!/bin/bash --login 
+	#PBS -N #{executable_name}.#{job_identifier}
+	#PBS -l select=#{nodes}
+	#PBS -l walltime=#{sprintf("%02d:%02d:%02d", hours, mins, secs)}
+	#{@project ? "#PBS -A #@project" : ""}
+
+	### start of jobscript 
+	cd $PBS_O_WORKDIR 
+	echo "workdir: $PBS_O_WORKDIR" 
+#{code_run_environment}
+
+	echo "Submitting #{nodes}x#{ppn} job on #{CodeRunner::SYS} for project #@project..."
+EOF
+	end
+		end
+
+		def max_ppn
+			24
+		end
+
+	def mpi_prog
+		"aprun -n #{ppn}"
+	end
+
+end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: coderunner
 version: !ruby/object:Gem::Version
-  version: 0.13.23
+  version: 0.13.24
   prerelease: 
 platform: ruby
 authors:
@@ -9,11 +9,11 @@ authors:
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2013-10-21 00:00:00.000000000 Z
+date: 2013-11-14 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: graphkit
-  requirement: &18265900 !ruby/object:Gem::Requirement
+  requirement: &24726720 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -21,10 +21,10 @@ dependencies:
         version: 0.2.0
   type: :runtime
   prerelease: false
-  version_requirements: *18265900
+  version_requirements: *24726720
 - !ruby/object:Gem::Dependency
   name: parallelpipes
-  requirement: &18265300 !ruby/object:Gem::Requirement
+  requirement: &24726220 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -32,10 +32,10 @@ dependencies:
         version: 1.0.0
   type: :runtime
   prerelease: false
-  version_requirements: *18265300
+  version_requirements: *24726220
 - !ruby/object:Gem::Dependency
   name: rubyhacks
-  requirement: &18263820 !ruby/object:Gem::Requirement
+  requirement: &24725740 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -43,10 +43,10 @@ dependencies:
         version: 0.1.4
   type: :runtime
   prerelease: false
-  version_requirements: *18263820
+  version_requirements: *24725740
 - !ruby/object:Gem::Dependency
   name: gsl
-  requirement: &18279100 !ruby/object:Gem::Requirement
+  requirement: &24725240 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -54,10 +54,10 @@ dependencies:
         version: 1.12.0
   type: :runtime
   prerelease: false
-  version_requirements: *18279100
+  version_requirements: *24725240
 - !ruby/object:Gem::Dependency
   name: gsl_extras
-  requirement: &18278440 !ruby/object:Gem::Requirement
+  requirement: &24724760 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -65,10 +65,10 @@ dependencies:
         version: 0.3.0
   type: :runtime
   prerelease: false
-  version_requirements: *18278440
+  version_requirements: *24724760
 - !ruby/object:Gem::Dependency
   name: hostmanager
-  requirement: &18277900 !ruby/object:Gem::Requirement
+  requirement: &24723880 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>'
@@ -76,10 +76,10 @@ dependencies:
         version: 0.1.0
   type: :runtime
   prerelease: false
-  version_requirements: *18277900
+  version_requirements: *24723880
 - !ruby/object:Gem::Dependency
   name: shoulda
-  requirement: &18277380 !ruby/object:Gem::Requirement
+  requirement: &24723260 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -87,10 +87,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *18277380
+  version_requirements: *24723260
 - !ruby/object:Gem::Dependency
   name: rdoc
-  requirement: &18276800 !ruby/object:Gem::Requirement
+  requirement: &24722780 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -98,10 +98,10 @@ dependencies:
         version: '3.12'
   type: :development
   prerelease: false
-  version_requirements: *18276800
+  version_requirements: *24722780
 - !ruby/object:Gem::Dependency
   name: bundler
-  requirement: &18276300 !ruby/object:Gem::Requirement
+  requirement: &24738600 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>'
@@ -109,10 +109,10 @@ dependencies:
         version: 1.0.0
   type: :development
   prerelease: false
-  version_requirements: *18276300
+  version_requirements: *24738600
 - !ruby/object:Gem::Dependency
   name: jeweler
-  requirement: &18275760 !ruby/object:Gem::Requirement
+  requirement: &24738040 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -120,7 +120,7 @@ dependencies:
         version: 1.8.4
   type: :development
   prerelease: false
-  version_requirements: *18275760
+  version_requirements: *24738040
 description: CodeRunner is a framework for the automated running and analysis of simulations.
   It automatically generates any necessary input files, organises the output data
   and analyses it. Because it is a modular system, it can easily be customised to
@@ -165,6 +165,7 @@ files:
 - lib/coderunner/merged_code_runner.rb
 - lib/coderunner/remote_code_runner.rb
 - lib/coderunner/run.rb
+- lib/coderunner/system_modules/archer.rb
 - lib/coderunner/system_modules/blue_joule.rb
 - lib/coderunner/system_modules/dirac.rb
 - lib/coderunner/system_modules/edison.rb