cirneco 0.9.25 → 0.9.26

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA256:
-  metadata.gz: b72604c9b3de7f0b5fac6c06c8eb07a6dbb2de5358efab68557559a3500d95b0
-  data.tar.gz: b12e288dc3c8896cba0046156c7e88deade655fbf17fc09f4261a0e6298b1de3
+  metadata.gz: 1cc8643645d23b3d2995639c6ee153e006547918e4fffa0cd64063a9628722b0
+  data.tar.gz: f66ce1ea88a7b0f3b80fa3625d50bcc1f48e5a97761baab5f7b36f9e1a2bbfac
 SHA512:
-  metadata.gz: 991287174d3662047df011f53a5d71a43ba5a3fb630f900dd9bda1d43380c65a584ea1c361d980e4a75b8752a8364549bee5282b3dcd807befd715ff4228a65d
-  data.tar.gz: 9fba4dbe7e540d68f5c252c3060b9ce0cd5d297e35bc4c193d27ef0b1ba8f75b6fdd305e43cbeeef9ec60b9d0f528e022a3fd9e50a93c4929aa3cca6f27be64e
+  metadata.gz: 902fdaeccbd4f869e97ed44fbbd91fa77d7430e25ab9612a8e446c278f0402db241cc54a07772490a8a80d2227dda5f299837a83621f25796c528ad6bfba146d
+  data.tar.gz: 636c9bf5ea8b5f9049241ded6fc0d7a16ab08372b4b2d5a2d46d3de440ce62512d4effe5a10f7ac0d275749ec1b9a8e338fcb71fd35a00371123c6e57d1d79e0

data/Gemfile.lock

@@ -1,7 +1,7 @@
 PATH
   remote: .
   specs:
-    cirneco (0.9.25)
+    cirneco (0.9.26)
       activesupport (>= 4.2.5, < 6)
       base32-url (~> 0.5)
       bergamasco (~> 0.3)
@@ -36,7 +36,7 @@ GEM
       safe_yaml (~> 1.0, >= 1.0.4)
     bibtex-ruby (4.4.7)
       latex-decode (~> 0.0)
-    bolognese (0.13.4)
+    bolognese (0.14.1)
       activesupport (>= 4.2.5, < 6)
       benchmark_methods (~> 0.7)
       bibtex-ruby (~> 4.1)
@@ -66,13 +66,13 @@ GEM
     diff-lcs (1.3)
     docile (1.1.5)
     dotenv (2.5.0)
-    ebnf (1.1.2)
-      rdf (>= 2.2, < 4.0)
+    ebnf (1.1.3)
+      rdf (~> 3.0)
       sxp (~> 1.0)
     excon (0.62.0)
     faraday (0.15.2)
       multipart-post (>= 1.2, < 3)
-    faraday-encoding (0.0.4)
+    faraday-encoding (0.0.5)
       faraday
     faraday_middleware (0.12.2)
       faraday (>= 0.7.4, < 1.0)
@@ -129,7 +129,7 @@ GEM
     rack-test (0.8.3)
       rack (>= 1.0, < 3)
     rake (12.3.1)
-    rdf (3.0.2)
+    rdf (3.0.3)
       hamster (~> 3.0)
       link_header (~> 0.0, >= 0.0.8)
     rdf-aggregate-repo (2.2.1)
@@ -148,7 +148,7 @@ GEM
     rdf-turtle (2.2.2)
       ebnf (~> 1.1)
       rdf (>= 2.2, < 4.0)
-    rdf-xsd (3.0.0)
+    rdf-xsd (3.0.1)
       rdf (~> 3.0)
     rspec (3.8.0)
       rspec-core (~> 3.8.0)
@@ -204,4 +204,4 @@ DEPENDENCIES
   webmock (~> 3.0, >= 3.0.1)
 
 BUNDLED WITH
-   1.16.1
+   1.16.4

data/README.md

@@ -127,6 +127,19 @@ Hide DOIs with metadata for all markdown files in a folder
 cirneco doi hide /source/posts
 ```
 
+## Bulk Operations
+
+Transfer a list of DOIs. A list of DOIs must be provided in a file
+
+```
+10.5438/5aep-2n86
+10.5438/cd2b-xj80
+```
+
+```shell
+cirneco doi transfer --target DATACITE.DATACITE --jwt {YOUR-JSON-WEB-TOKEN} ./doi_transfer.txt
+```
+
 ## Development
 
 We use rspec for unit testing:

data/lib/cirneco/api.rb

@@ -21,6 +21,19 @@ module Cirneco
       Maremma.put(url, content_type: 'application/xml;charset=UTF-8', data: options[:data], username: options[:username], password: options[:password])
     end
 
+    def transfer_doi(doi, options={})
+      return OpenStruct.new(body: { "errors" => [{ "title" => "JWT or Username or password missing" }] }) unless options[:jwt].present? || (options[:username].present? && options[:password].present?)
+
+      api_url = options[:sandbox] ? 'https://api.test.datacite.org' : 'https://api.datacite.org'
+
+      url = URI.encode("#{api_url}/dois/#{doi}")
+      if options[:jwt].present?
+        Maremma.patch(url, content_type: 'application/vnd.api+json;charset=UTF-8', data: options[:data], bearer: options[:jwt]) 
+      else
+        Maremma.patch(url, content_type: 'application/vnd.api+json;charset=UTF-8', data: options[:data], username: options[:username], password: options[:password])
+      end
+    end
+
     def get_metadata(doi, options={})
       return OpenStruct.new(body: { "errors" => [{ "title" => "Username or password missing" }] }) unless options[:username].present? && options[:password].present?
 

data/lib/cirneco/doi.rb

@@ -112,5 +112,31 @@ module Cirneco
         puts "Checksum for #{doi} is not valid"
       end
     end
+
+    desc "transfer DOIs", "transfer list of DOIs"
+    method_option :target,  :type => :string
+    method_option :username, :default => ENV['MDS_USERNAME']
+    method_option :password, :default => ENV['MDS_PASSWORD']
+    method_option :sandbox, :type => :boolean, :force => false
+    method_option :jwt, :default => ENV['JWT']
+    def transfer(file)
+      count = 0
+      File.foreach(file) do |line|
+        doi = line.rstrip
+        next unless doi.present?
+        meta = generate_transfer_template(options)
+
+        response = transfer_doi(doi, options.merge(data: meta.to_json))
+
+        if [200, 201].include?(response.status)
+          puts "#{doi} Transfered to #{options[:target]}."
+          count += 1
+        else
+          puts "Error: " + response.body["errors"].first.fetch("title", "An error occured")
+        end
+      end
+
+      puts "#{count} DOIs transfered."
+    end
   end
 end

data/lib/cirneco/utils.rb

@@ -18,6 +18,26 @@ module Cirneco
       response
     end
 
+    def generate_transfer_template(options={})
+      response = {
+        "data" => {
+          "type" => "dois",
+          "attributes" => {
+            "mode" => "transfer"
+          },
+          "relationships"=> {
+            "client"=>  {
+              "data"=> {
+                "type"=> "clients",
+                "id"=> options[:target].downcase
+              }
+            }
+          }
+        }
+      }
+      response
+    end
+
     def decode_doi(doi)
       prefix, string = doi.split('/', 2)
       Base32::URL.decode(string, checksum: true).to_i

data/lib/cirneco/version.rb

@@ -1,3 +1,3 @@
 module Cirneco
-  VERSION = "0.9.25"
+  VERSION = "0.9.26"
 end

metadata

@@ -1,14 +1,14 @@
 --- !ruby/object:Gem::Specification
 name: cirneco
 version: !ruby/object:Gem::Version
-  version: 0.9.25
+  version: 0.9.26
 platform: ruby
 authors:
 - Martin Fenner
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2018-08-31 00:00:00.000000000 Z
+date: 2018-09-20 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: maremma