chipgps 0.1.1 → 0.1.2

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Files changed (6) hide show
  1. data/Gemfile +1 -0
  2. data/Gemfile.lock +2 -1
  3. data/VERSION +1 -1
  4. data/chipgps.gemspec +6 -3
  5. data/sample/{gps2bet.rb → gps2bed.rb} +0 -0
  6. metadata +21 -10
data/Gemfile CHANGED
@@ -6,6 +6,7 @@ source "http://rubygems.org"
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  # Add dependencies to develop your gem here.
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  # Include everything needed to run rake, tests, features, etc.
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  group :development do
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+ gem "rake", "~> 0.9.2"
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  gem "bundler", "~> 1.0.0"
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  gem "jeweler", "~> 1.6.4"
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  gem "rcov", ">= 0"
data/Gemfile.lock CHANGED
@@ -6,7 +6,7 @@ GEM
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  bundler (~> 1.0)
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  git (>= 1.2.5)
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  rake
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- rake (0.9.2)
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+ rake (0.9.2.2)
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  rcov (0.9.11)
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  PLATFORMS
@@ -15,4 +15,5 @@ PLATFORMS
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  DEPENDENCIES
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  bundler (~> 1.0.0)
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  jeweler (~> 1.6.4)
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+ rake (~> 0.9.2)
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  rcov
data/VERSION CHANGED
@@ -1 +1 @@
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- 0.1.1
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+ 0.1.2
data/chipgps.gemspec CHANGED
@@ -5,11 +5,11 @@
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  Gem::Specification.new do |s|
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  s.name = "chipgps"
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- s.version = "0.1.1"
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+ s.version = "0.1.2"
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  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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  s.authors = ["Itoshi NIKAIDO"]
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- s.date = "2011-10-20"
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+ s.date = "2011-11-20"
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  s.description = "ChIPgps is an open source Ruby library for parsing result files of the Genome Positioning System which is a software tool to study protein-DNA interaction using ChIP-Seq data."
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  s.email = "dritoshi@gmail.com"
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  s.extra_rdoc_files = [
@@ -27,7 +27,7 @@ Gem::Specification.new do |s|
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  "chipgps.gemspec",
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  "lib/chipgps.rb",
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  "sample/Demo_2_GPS_significant.txt",
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- "sample/gps2bet.rb",
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+ "sample/gps2bed.rb",
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  "test/helper.rb",
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  "test/test_chipgps.rb"
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  ]
@@ -41,15 +41,18 @@ Gem::Specification.new do |s|
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  s.specification_version = 3
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  if Gem::Version.new(Gem::VERSION) >= Gem::Version.new('1.2.0') then
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+ s.add_development_dependency(%q<rake>, ["~> 0.9.2"])
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  s.add_development_dependency(%q<bundler>, ["~> 1.0.0"])
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  s.add_development_dependency(%q<jeweler>, ["~> 1.6.4"])
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  s.add_development_dependency(%q<rcov>, [">= 0"])
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  else
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+ s.add_dependency(%q<rake>, ["~> 0.9.2"])
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  s.add_dependency(%q<bundler>, ["~> 1.0.0"])
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  s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
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  s.add_dependency(%q<rcov>, [">= 0"])
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  end
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  else
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+ s.add_dependency(%q<rake>, ["~> 0.9.2"])
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  s.add_dependency(%q<bundler>, ["~> 1.0.0"])
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  s.add_dependency(%q<jeweler>, ["~> 1.6.4"])
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  s.add_dependency(%q<rcov>, [">= 0"])
data/sample/{gps2bet.rb → gps2bed.rb} RENAMED
File without changes
metadata CHANGED
@@ -2,7 +2,7 @@
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  name: chipgps
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  version: !ruby/object:Gem::Version
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  prerelease:
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- version: 0.1.1
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+ version: 0.1.2
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  platform: ruby
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  authors:
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  - Itoshi NIKAIDO
@@ -10,33 +10,44 @@ autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2011-10-20 00:00:00 Z
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+ date: 2011-11-20 00:00:00 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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- name: bundler
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+ name: rake
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  requirement: &id001 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ~>
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  - !ruby/object:Gem::Version
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- version: 1.0.0
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+ version: 0.9.2
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  type: :development
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  prerelease: false
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  version_requirements: *id001
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  - !ruby/object:Gem::Dependency
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- name: jeweler
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+ name: bundler
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  requirement: &id002 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ~>
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  - !ruby/object:Gem::Version
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- version: 1.6.4
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+ version: 1.0.0
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  type: :development
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  prerelease: false
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  version_requirements: *id002
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  - !ruby/object:Gem::Dependency
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- name: rcov
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+ name: jeweler
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  requirement: &id003 !ruby/object:Gem::Requirement
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+ none: false
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+ requirements:
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+ - - ~>
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+ - !ruby/object:Gem::Version
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+ version: 1.6.4
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+ type: :development
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+ prerelease: false
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+ version_requirements: *id003
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+ - !ruby/object:Gem::Dependency
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+ name: rcov
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+ requirement: &id004 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ">="
@@ -44,7 +55,7 @@ dependencies:
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  version: "0"
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  type: :development
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  prerelease: false
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- version_requirements: *id003
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+ version_requirements: *id004
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  description: ChIPgps is an open source Ruby library for parsing result files of the Genome Positioning System which is a software tool to study protein-DNA interaction using ChIP-Seq data.
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  email: dritoshi@gmail.com
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  executables: []
@@ -65,7 +76,7 @@ files:
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  - chipgps.gemspec
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  - lib/chipgps.rb
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  - sample/Demo_2_GPS_significant.txt
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- - sample/gps2bet.rb
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+ - sample/gps2bed.rb
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  - test/helper.rb
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  - test/test_chipgps.rb
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  homepage: http://github.com/dritoshi/chipgps
@@ -81,7 +92,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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  requirements:
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  - - ">="
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  - !ruby/object:Gem::Version
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- hash: 1295371598341010762
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+ hash: -48557904386486017
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  segments:
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  - 0
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  version: "0"