cagnut_bwa 0.3.0 → 0.3.1

checksums.yaml

@@ -1,7 +1,7 @@
 ---
 SHA1:
-  metadata.gz: 212201476cdd487c7d175275b4b2dda5064794a8
-  data.tar.gz: e1b5fb5113d105b8ba7782c3b34e100fb05f6820
+  metadata.gz: 9a590ef059a51b29608fa778fb7240b15fd35324
+  data.tar.gz: 84eb55f1953dee48a355399b869b93dca3ae2eda
 SHA512:
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-  data.tar.gz: 002602c3c99c28f7eb7eef0504038c1c07e3df88fafecf8b15c53c202c96bd32040032abd2fda8d67f60edd984f6da195c0e36473a04f55179f27d9668b586d9
+  metadata.gz: 30557300233764630040310ac624e8779c6f174833ccea6045c384922e5093ea280d127d70d46002cfb4e82fa03686ecb13941d6b2b67b70b4be568ba5387655
+  data.tar.gz: c46eb66f3291c6fb55422f50263031698bd1818def78c4b8a7e8a0132e4f92b656a357d5b4aa226f466a1782f8f553329a53d6a2e54de079cfa12282dfea1ea7

data/lib/cagnut_bwa/functions/aln.rb

@@ -46,8 +46,8 @@ module CagnutBwa
       array = aln_params.dup
       array.insert 1, 'aln'
       array << "#{ref_fasta}"
-      array << "-f #{@output}"
       array << "#{@input}"
+      array << "> #{@output}"
       array.uniq
     end
 
@@ -55,8 +55,8 @@ module CagnutBwa
       array = aln_params.dup
       array.insert 1, 'aln'
       array << "#{ref_fasta}"
-      array << "-f #{@output2}"
-      array << "#{@input2}"
+      array << "#{@input2} >"
+      array << "#{@output2}"
       array.uniq
     end
 

data/lib/cagnut_bwa/version.rb

@@ -1,3 +1,3 @@
 module CagnutBwa
-  VERSION = "0.3.0"
+  VERSION = "0.3.1"
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: cagnut_bwa
 version: !ruby/object:Gem::Version
-  version: 0.3.0
+  version: 0.3.1
 platform: ruby
 authors:
 - Shi-Gang Wang
@@ -9,7 +9,7 @@ authors:
 autorequire: 
 bindir: exe
 cert_chain: []
-date: 2016-11-01 00:00:00.000000000 Z
+date: 2016-11-07 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: cagnut_core