bolognese 1.2.11 → 1.2.14
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/Gemfile.lock +1 -1
- data/lib/bolognese/readers/crossref_reader.rb +24 -13
- data/lib/bolognese/utils.rb +1 -1
- data/lib/bolognese/version.rb +1 -1
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book.yml +127 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/component.yml +109 -0
- data/spec/readers/crossref_reader_spec.rb +34 -1
- metadata +4 -2
checksums.yaml
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metadata.gz:
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metadata.gz: b161e85e32a6b26d50c1aa4be3cbe672a29b7a873223ff1327da0e4cd71c0574
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data.tar.gz: a69885385e246fc479d1c5ac803b70aa3c1b5a674bbaa8257af049e45f55ad4d
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metadata.gz: f8eba6e85d0a04522531abc25769f19144fdbfd62c61233c30cd9ff2e71da3ae3b9d41a97e529c81bcec3984ebb7868b9a56ea90ff0fb6d5b6118d94edf28caf
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data.tar.gz: 5416771fec0658fed4f8222935f0dd98840e512f50a89e375736094c03282deff66320aefdf15a436743e3ada15263c16ddbfb54c1a7d00abd8261669d84b79c
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data/Gemfile.lock
CHANGED
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@@ -58,7 +58,7 @@ module Bolognese
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bibliographic_metadata = meta.dig("crossref", "journal", "journal_article").to_h
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program_metadata = bibliographic_metadata.dig("crossmark", "custom_metadata", "program") || bibliographic_metadata.dig("program")
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journal_issue = meta.dig("crossref", "journal", "journal_issue") || {}
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journal_article = meta.dig("crossref", "journal", "journal_article") ||
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journal_article = meta.dig("crossref", "journal", "journal_article") || {}
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resource_type = if journal_article.present?
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"journal_article"
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@@ -72,6 +72,8 @@ module Bolognese
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publisher = bibliographic_metadata.dig("institution", "institution_name")
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when "sa_component"
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bibliographic_metadata = meta.dig("crossref", "sa_component", "component_list", "component").to_h
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related_identifier = Array.wrap(query.to_h["crm_item"]).find { |cr| cr["name"] == "relation" }
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journal_metadata = { "relatedIdentifier" => related_identifier.to_h.fetch("__content", nil) }
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when "database"
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bibliographic_metadata = meta.dig("crossref", "database", "dataset").to_h
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resource_type = "dataset"
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@@ -88,15 +90,19 @@ module Bolognese
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"ris" => Bolognese::Utils::CR_TO_RIS_TRANSLATIONS[resource_type] || "JOUR"
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}.compact
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titles =
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titles = if bibliographic_metadata.dig("titles").present?
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Array.wrap(bibliographic_metadata.dig("titles")).map do |r|
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if r.blank? || r["title"].blank?
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nil
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elsif r["title"].is_a?(String)
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{ "title" => sanitize(r["title"]) }
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else
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{ "title" => sanitize(r.dig("title", "__content__")) }.compact
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end
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end.compact
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else
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[{ "title" => ":{unav)" }]
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end
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date_created = Array.wrap(query.to_h["crm_item"]).find { |cr| cr["name"] == "created" }
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date_updated = Array.wrap(query.to_h["crm_item"]).find { |cr| cr["name"] == "last-update" }
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@@ -188,7 +194,9 @@ module Bolognese
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end
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def crossref_people(bibliographic_metadata, contributor_role)
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person = bibliographic_metadata.dig("contributors", "person_name")
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person = bibliographic_metadata.dig("contributors", "person_name")
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person = [{ "name" => ":(unav)", "contributor_role"=>"author" }] if contributor_role == "author" && Array.wrap(person).select { |a| a["contributor_role"] == "author" }.blank?
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Array.wrap(person).select { |a| a["contributor_role"] == contributor_role }.map do |a|
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name_identifiers = normalize_orcid(parse_attributes(a["ORCID"])).present? ? [{ "nameIdentifier" => normalize_orcid(parse_attributes(a["ORCID"])), "nameIdentifierScheme" => "ORCID", "schemeUri"=>"https://orcid.org" }] : nil
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if a["surname"].present? || a["given_name"].present? || name_identifiers.present?
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@@ -200,8 +208,7 @@ module Bolognese
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"contributorType" => contributor_role == "editor" ? "Editor" : nil }.compact
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else
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{ "nameType" => "Organizational",
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"name" => a["name"]
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"contributorType" => a["contributor_role"] }
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"name" => a["name"] }
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end
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end.unwrap
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end
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"relationType" => "IsPartOf",
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"relatedIdentifierType" => "ISSN",
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"resourceTypeGeneral" => "Collection" }.compact
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elsif model_metadata.present? && model_metadata.fetch("relatedIdentifier", nil).present?
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{ "relatedIdentifier" => model_metadata.fetch("relatedIdentifier", nil),
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"relationType" => "IsPartOf",
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"relatedIdentifierType" => "DOI" }.compact
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else
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nil
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end
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data/lib/bolognese/utils.rb
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a["family"] = a["familyName"]
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a["given"] = a["givenName"]
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a["literal"] = a["name"] unless a["familyName"].present?
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a.except("nameType", "type", "@type", "id", "@id", "name", "familyName", "givenName", "affiliation", "nameIdentifiers").compact
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a.except("nameType", "type", "@type", "id", "@id", "name", "familyName", "givenName", "affiliation", "nameIdentifiers", "contributorType").compact
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end.presence
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end
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data/lib/bolognese/version.rb
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"DOI": "10.2973",
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"RA": "Crossref"
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string: "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<crossref_result xmlns=\"http://www.crossref.org/qrschema/3.0\"
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version=\"3.0\" xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:schemaLocation=\"http://www.crossref.org/qrschema/3.0
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http://www.crossref.org/schemas/crossref_query_output3.0.xsd\">\r\n <query_result>\r\n
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\ <head>\r\n <doi_batch_id>none</doi_batch_id>\r\n </head>\r\n <body>\r\n
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\ <query status=\"resolved\">\r\n <doi type=\"book_title\">10.2973/odp.proc.ir.180.2000</doi>\r\n
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\ <crm-item name=\"publisher-name\" type=\"string\">International Ocean
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Discovery Program (IODP)</crm-item>\r\n <crm-item name=\"prefix-name\"
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type=\"string\">International Ocean Discovery Program Texas</crm-item>\r\n
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\ <crm-item name=\"member-id\" type=\"number\">1029</crm-item>\r\n <crm-item
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name=\"citation-id\" type=\"number\">23807285</crm-item>\r\n <crm-item
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name=\"book-id\" type=\"number\">284099</crm-item>\r\n <crm-item name=\"series-id\"
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type=\"number\">283327</crm-item>\r\n <crm-item name=\"deposit-timestamp\"
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type=\"number\">20061017201744</crm-item>\r\n <crm-item name=\"owner-prefix\"
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type=\"string\">10.2973</crm-item>\r\n <crm-item name=\"last-update\"
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type=\"date\">2009-02-02T21:19:43Z</crm-item>\r\n <crm-item name=\"created\"
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type=\"date\">2006-10-17T19:50:37Z</crm-item>\r\n <crm-item name=\"citedby-count\"
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type=\"number\">15</crm-item>\r\n <doi_record>\r\n <crossref
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xmlns=\"http://www.crossref.org/xschema/1.0\" xsi:schemaLocation=\"http://www.crossref.org/xschema/1.0
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http://doi.crossref.org/schemas/unixref1.0.xsd\">\r\n <book book_type=\"monograph\">\r\n
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\ <book_metadata language=\"en\">\r\n <contributors>\r\n
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\ <person_name sequence=\"first\" contributor_role=\"editor\">\r\n
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\ <given_name>B.</given_name>\r\n <surname>Taylor</surname>\r\n
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\ </person_name>\r\n <person_name sequence=\"additional\"
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contributor_role=\"editor\">\r\n <given_name>P.</given_name>\r\n
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\ <surname>Huchon</surname>\r\n </person_name>\r\n
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\ <person_name sequence=\"additional\" contributor_role=\"editor\">\r\n
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\ <given_name>A.</given_name>\r\n <surname>Klaus</surname>\r\n
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\ </person_name>\r\n <organization sequence=\"additional\"
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contributor_role=\"editor\">et al.</organization>\r\n </contributors>\r\n
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\ <titles>\r\n <title>Proceedings of the Ocean
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Drilling Program, 180 Initial Reports</title>\r\n </titles>\r\n
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\ <series_metadata>\r\n <titles>\r\n <title>Proceedings
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of the Ocean Drilling Program</title>\r\n </titles>\r\n </series_metadata>\r\n
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\ <volume>180</volume>\r\n <publication_date
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media_type=\"online\">\r\n <month>02</month>\r\n <day>04</day>\r\n
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\ <year>2000</year>\r\n </publication_date>\r\n
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\ <publisher>\r\n <publisher_name>Ocean Drilling
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Program</publisher_name>\r\n </publisher>\r\n <doi_data>\r\n
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\ <doi>10.2973/odp.proc.ir.180.2000</doi>\r\n <resource>http://www-odp.tamu.edu/publications/180_IR/180TOC.HTM</resource>\r\n
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\ </doi_data>\r\n </book_metadata>\r\n </book>\r\n
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\ </crossref>\r\n </doi_record>\r\n </query>\r\n </body>\r\n
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\ </query_result>\r\n</crossref_result>"
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http_version:
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recorded_at: Sat, 06 Jul 2019 21:18:46 GMT
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recorded_with: VCR 3.0.3
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Server:
|
|
33
|
+
- cloudflare
|
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34
|
+
Cf-Ray:
|
|
35
|
+
- 4f244f0a1b1ad711-FRA
|
|
36
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+
body:
|
|
37
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+
encoding: ASCII-8BIT
|
|
38
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+
string: |-
|
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39
|
+
[
|
|
40
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+
{
|
|
41
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+
"DOI": "10.1371",
|
|
42
|
+
"RA": "Crossref"
|
|
43
|
+
}
|
|
44
|
+
]
|
|
45
|
+
http_version:
|
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46
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+
recorded_at: Sat, 06 Jul 2019 20:25:35 GMT
|
|
47
|
+
- request:
|
|
48
|
+
method: get
|
|
49
|
+
uri: https://api.crossref.org/works/10.1371/journal.pmed.0030277.g001/transform/application/vnd.crossref.unixsd+xml
|
|
50
|
+
body:
|
|
51
|
+
encoding: US-ASCII
|
|
52
|
+
string: ''
|
|
53
|
+
headers:
|
|
54
|
+
User-Agent:
|
|
55
|
+
- Mozilla/5.0 (compatible; Maremma/4.2.6; mailto:info@datacite.org)
|
|
56
|
+
Accept:
|
|
57
|
+
- text/xml
|
|
58
|
+
response:
|
|
59
|
+
status:
|
|
60
|
+
code: 200
|
|
61
|
+
message: OK
|
|
62
|
+
headers:
|
|
63
|
+
Link:
|
|
64
|
+
- <http://dx.doi.org/10.1371/journal.pmed.0030277.g001>; rel="canonical"
|
|
65
|
+
Access-Control-Allow-Origin:
|
|
66
|
+
- "*"
|
|
67
|
+
Access-Control-Allow-Headers:
|
|
68
|
+
- X-Requested-With
|
|
69
|
+
Content-Length:
|
|
70
|
+
- '2142'
|
|
71
|
+
Server:
|
|
72
|
+
- http-kit
|
|
73
|
+
Date:
|
|
74
|
+
- Sat, 06 Jul 2019 20:25:35 GMT
|
|
75
|
+
X-Rate-Limit-Limit:
|
|
76
|
+
- '50'
|
|
77
|
+
X-Rate-Limit-Interval:
|
|
78
|
+
- 1s
|
|
79
|
+
Connection:
|
|
80
|
+
- close
|
|
81
|
+
body:
|
|
82
|
+
encoding: ASCII-8BIT
|
|
83
|
+
string: "<?xml version=\"1.0\" encoding=\"UTF-8\"?>\n<crossref_result xmlns=\"http://www.crossref.org/qrschema/3.0\"
|
|
84
|
+
version=\"3.0\" xmlns:xsi=\"http://www.w3.org/2001/XMLSchema-instance\" xsi:schemaLocation=\"http://www.crossref.org/qrschema/3.0
|
|
85
|
+
http://www.crossref.org/schemas/crossref_query_output3.0.xsd\">\r\n <query_result>\r\n
|
|
86
|
+
\ <head>\r\n <doi_batch_id>none</doi_batch_id>\r\n </head>\r\n <body>\r\n
|
|
87
|
+
\ <query status=\"resolved\">\r\n <doi type=\"component\">10.1371/journal.pmed.0030277.g001</doi>\r\n
|
|
88
|
+
\ <crm-item name=\"publisher-name\" type=\"string\">Public Library of
|
|
89
|
+
Science (PLoS)</crm-item>\r\n <crm-item name=\"prefix-name\" type=\"string\">Public
|
|
90
|
+
Library of Science</crm-item>\r\n <crm-item name=\"member-id\" type=\"number\">340</crm-item>\r\n
|
|
91
|
+
\ <crm-item name=\"citation-id\" type=\"number\">78426024</crm-item>\r\n
|
|
92
|
+
\ <crm-item name=\"journal-id\" type=\"number\">31937</crm-item>\r\n
|
|
93
|
+
\ <crm-item name=\"deposit-timestamp\" type=\"number\">201510161053338750</crm-item>\r\n
|
|
94
|
+
\ <crm-item name=\"owner-prefix\" type=\"string\">10.1371</crm-item>\r\n
|
|
95
|
+
\ <crm-item name=\"last-update\" type=\"date\">2018-10-19T21:13:42Z</crm-item>\r\n
|
|
96
|
+
\ <crm-item name=\"created\" type=\"date\">2015-10-20T20:01:19Z</crm-item>\r\n
|
|
97
|
+
\ <crm-item name=\"citedby-count\" type=\"number\">0</crm-item>\r\n
|
|
98
|
+
\ <crm-item name=\"relation\" type=\"doi\" claim=\"hasComponent\">10.1371/journal.pmed.0030277</crm-item>\r\n
|
|
99
|
+
\ <doi_record>\r\n <crossref xmlns=\"http://www.crossref.org/xschema/1.1\"
|
|
100
|
+
xsi:schemaLocation=\"http://www.crossref.org/xschema/1.1 http://doi.crossref.org/schemas/unixref1.1.xsd\">\r\n
|
|
101
|
+
\ <sa_component>\r\n <component_list>\r\n <component
|
|
102
|
+
reg-agency=\"CrossRef\">\r\n <description />\r\n <doi_data>\r\n
|
|
103
|
+
\ <doi>10.1371/journal.pmed.0030277.g001</doi>\r\n <resource>https://dx.plos.org/10.1371/journal.pmed.0030277.g001</resource>\r\n
|
|
104
|
+
\ </doi_data>\r\n </component>\r\n </component_list>\r\n
|
|
105
|
+
\ </sa_component>\r\n </crossref>\r\n </doi_record>\r\n
|
|
106
|
+
\ </query>\r\n </body>\r\n </query_result>\r\n</crossref_result>"
|
|
107
|
+
http_version:
|
|
108
|
+
recorded_at: Sat, 06 Jul 2019 20:25:35 GMT
|
|
109
|
+
recorded_with: VCR 3.0.3
|
|
@@ -179,6 +179,22 @@ describe Bolognese::Metadata, vcr: true do
|
|
|
179
179
|
expect(subject.agency).to eq("Crossref")
|
|
180
180
|
end
|
|
181
181
|
|
|
182
|
+
it "component" do
|
|
183
|
+
input = "10.1371/journal.pmed.0030277.g001"
|
|
184
|
+
subject = Bolognese::Metadata.new(input: input)
|
|
185
|
+
expect(subject.valid?).to be true
|
|
186
|
+
expect(subject.identifiers).to eq([{"identifier"=>"https://doi.org/10.1371/journal.pmed.0030277.g001", "identifierType"=>"DOI"}])
|
|
187
|
+
expect(subject.url).to eq("https://dx.plos.org/10.1371/journal.pmed.0030277.g001")
|
|
188
|
+
expect(subject.types).to eq("bibtex"=>"misc", "citeproc"=>"article-journal", "resourceType"=>"SaComponent", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
|
|
189
|
+
expect(subject.creators).to eq("name"=>":(unav)", "nameType"=>"Organizational")
|
|
190
|
+
expect(subject.titles).to eq([{"title"=>":{unav)"}])
|
|
191
|
+
expect(subject.descriptions).to be_empty
|
|
192
|
+
expect(subject.dates).to eq([{"date"=>"2015-10-20", "dateType"=>"Issued"}, {"date"=>"2018-10-19T21:13:42Z", "dateType"=>"Updated"}])
|
|
193
|
+
expect(subject.publication_year).to eq("2015")
|
|
194
|
+
expect(subject.publisher).to eq("Public Library of Science (PLoS)")
|
|
195
|
+
expect(subject.agency).to eq("Crossref")
|
|
196
|
+
end
|
|
197
|
+
|
|
182
198
|
it "dataset usda" do
|
|
183
199
|
input = "https://doi.org/10.2737/RDS-2018-0001"
|
|
184
200
|
subject = Bolognese::Metadata.new(input: input)
|
|
@@ -249,7 +265,7 @@ describe Bolognese::Metadata, vcr: true do
|
|
|
249
265
|
expect(subject.identifiers).to eq([{"identifier"=>"https://doi.org/10.3390/publications6020015", "identifierType"=>"DOI"}])
|
|
250
266
|
expect(subject.url).to eq("http://www.mdpi.com/2304-6775/6/2/15")
|
|
251
267
|
expect(subject.types).to eq("bibtex"=>"article", "citeproc"=>"article-journal", "resourceType"=>"JournalArticle", "resourceTypeGeneral"=>"Text", "ris"=>"JOUR", "schemaOrg"=>"ScholarlyArticle")
|
|
252
|
-
expect(subject.creators).to eq("
|
|
268
|
+
expect(subject.creators).to eq("name"=>":(unav)", "nameType"=>"Organizational")
|
|
253
269
|
expect(subject.titles).to eq([{"title"=>"Converting the Literature of a Scientific Field to Open Access through Global Collaboration: The Experience of SCOAP3 in Particle Physics"}])
|
|
254
270
|
expect(subject.dates).to eq([{"date"=>"2018-04-09", "dateType"=>"Issued"}, {"date"=>"2018-04-10T17:58:05Z", "dateType"=>"Updated"}])
|
|
255
271
|
expect(subject.publication_year).to eq("2018")
|
|
@@ -272,6 +288,23 @@ describe Bolognese::Metadata, vcr: true do
|
|
|
272
288
|
expect(subject.agency).to eq("Crossref")
|
|
273
289
|
end
|
|
274
290
|
|
|
291
|
+
it "another book" do
|
|
292
|
+
input = "https://doi.org/10.2973/odp.proc.ir.180.2000"
|
|
293
|
+
subject = Bolognese::Metadata.new(input: input)
|
|
294
|
+
expect(subject.valid?).to be true
|
|
295
|
+
expect(subject.identifiers).to eq([{"identifier"=>"https://doi.org/10.2973/odp.proc.ir.180.2000", "identifierType"=>"DOI"}])
|
|
296
|
+
expect(subject.url).to eq("http://www-odp.tamu.edu/publications/180_IR/180TOC.HTM")
|
|
297
|
+
expect(subject.types).to eq("bibtex"=>"book", "citeproc"=>"book", "resourceType"=>"Book", "ris"=>"BOOK", "schemaOrg"=>"Book")
|
|
298
|
+
expect(subject.creators).to eq("name"=>":(unav)", "nameType"=>"Organizational")
|
|
299
|
+
expect(subject.contributors.size).to eq(3)
|
|
300
|
+
expect(subject.contributors.first).to eq("contributorType"=>"Editor", "familyName"=>"Taylor", "givenName"=>"B.", "name"=>"Taylor, B.", "nameType"=>"Personal")
|
|
301
|
+
expect(subject.titles).to eq([{"title"=>"Proceedings of the Ocean Drilling Program, 180 Initial Reports"}])
|
|
302
|
+
expect(subject.dates).to eq([{"date"=>"2000-02-04", "dateType"=>"Issued"}, {"date"=>"2009-02-02T21:19:43Z", "dateType"=>"Updated"}])
|
|
303
|
+
expect(subject.publication_year).to eq("2000")
|
|
304
|
+
expect(subject.publisher).to eq("Ocean Drilling Program")
|
|
305
|
+
expect(subject.agency).to eq("Crossref")
|
|
306
|
+
end
|
|
307
|
+
|
|
275
308
|
it "mEDRA" do
|
|
276
309
|
input = "https://doi.org/10.3280/ecag2018-001005"
|
|
277
310
|
subject = Bolognese::Metadata.new(input: input)
|
metadata
CHANGED
|
@@ -1,14 +1,14 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: bolognese
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 1.2.
|
|
4
|
+
version: 1.2.14
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Martin Fenner
|
|
8
8
|
autorequire:
|
|
9
9
|
bindir: bin
|
|
10
10
|
cert_chain: []
|
|
11
|
-
date: 2019-07-
|
|
11
|
+
date: 2019-07-07 00:00:00.000000000 Z
|
|
12
12
|
dependencies:
|
|
13
13
|
- !ruby/object:Gem::Dependency
|
|
14
14
|
name: maremma
|
|
@@ -830,9 +830,11 @@ files:
|
|
|
830
830
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/JaLC.yml
|
|
831
831
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/KISTI.yml
|
|
832
832
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/OP.yml
|
|
833
|
+
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book.yml
|
|
833
834
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/another_book_chapter.yml
|
|
834
835
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book.yml
|
|
835
836
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/book_chapter.yml
|
|
837
|
+
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/component.yml
|
|
836
838
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset.yml
|
|
837
839
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/dataset_usda.yml
|
|
838
840
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/get_crossref_metadata/date_in_future.yml
|