bolognese 0.9.24 → 0.9.25
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- checksums.yaml +4 -4
- data/Gemfile.lock +2 -2
- data/lib/bolognese/utils.rb +3 -3
- data/lib/bolognese/version.rb +1 -1
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_https.yml +94 -0
- data/spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_www.yml +94 -0
- data/spec/utils_spec.rb +12 -0
- metadata +3 -1
checksums.yaml
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SHA1:
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metadata.gz:
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data.tar.gz:
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metadata.gz: bc915e15f8cc67f07df97f07940c1fd42f36bfde
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data.tar.gz: e5f7a9fcb0c71a382c108f46dd8b8e928ef27c2b
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SHA512:
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metadata.gz:
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metadata.gz: 50a3c57841b12442ff12941e27122290ee4d0662b6d636ded7b11883caa1635580f4c15946133bb4d520f9e82078e85e054a2bd239c46b4652b6e87018f923e2
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7
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data.tar.gz: 3c316919e69e2a937cfedbca564326e6d2c4a1f9eb21704bffa80848ce2772f329718c08441af570a7d8a6fe593f47b4496d13e886b425f9c5045e8b96fd82fa
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data/Gemfile.lock
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PATH
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remote: .
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specs:
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-
bolognese (0.9.
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bolognese (0.9.25)
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activesupport (>= 4.2.5, < 6)
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benchmark_methods (~> 0.7)
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bibtex-ruby (~> 4.1)
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@@ -177,4 +177,4 @@ DEPENDENCIES
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webmock (~> 1.22, >= 1.22.3)
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BUNDLED WITH
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1.15.1
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data/lib/bolognese/utils.rb
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end
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def orcid_from_url(url)
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Array(/\
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Array(/\A:(http|https)\/\/orcid\.org\/(.+)/.match(url)).last
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end
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def orcid_as_url(orcid)
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"
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"https://orcid.org/#{orcid}" if orcid.present?
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end
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def validate_orcid(orcid)
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orcid = Array(/\A(?:http:\/\/orcid\.org\/)?(\d{4}[[:space:]-]\d{4}[[:space:]-]\d{4}[[:space:]-]\d{3}[0-9X]+)\z/.match(orcid)).last
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orcid = Array(/\A(?:(http|https):\/\/(www\.)?orcid\.org\/)?(\d{4}[[:space:]-]\d{4}[[:space:]-]\d{4}[[:space:]-]\d{3}[0-9X]+)\z/.match(orcid)).last
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orcid.gsub(/[[:space:]]/, "-") if orcid.present?
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end
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data/lib/bolognese/version.rb
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owner=\"10.1101\" timestamp=\"2016-12-29 01:10:20\">\r\n <crossref>\r\n
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\ <posted_content type=\"preprint\" language=\"en\" metadata_distribution_opts=\"any\">\r\n
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\ <group_title>Scientific Communication and Education</group_title>\r\n
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\ <contributors>\r\n <person_name contributor_role=\"author\"
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sequence=\"first\">\r\n <given_name>Martin</given_name>\r\n <surname>Fenner</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-1419-2405</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Merc?</given_name>\r\n <surname>Crosas</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-1304-1939</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Jeffrey</given_name>\r\n <surname>Grethe</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-5212-7052</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>David</given_name>\r\n <surname>Kennedy</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-9377-0797</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Henning</given_name>\r\n <surname>Hermjakob</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-8479-0262</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Philippe</given_name>\r\n <surname>Rocca-Serra</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-9853-5668</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Robin</given_name>\r\n <surname>Berjon</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-1731-5346</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Sebastian</given_name>\r\n <surname>Karcher</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-8249-7388</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Maryann</given_name>\r\n <surname>Martone</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-8406-3871</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Timothy</given_name>\r\n <surname>Clark</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-4060-7360</ORCID>\r\n </person_name>\r\n
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\ </contributors>\r\n <titles>\r\n <title>A Data Citation
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Roadmap for Scholarly Data Repositories</title>\r\n </titles>\r\n <posted_date>\r\n
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\ <month>12</month>\r\n <day>28</day>\r\n <year>2016</year>\r\n
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\ </posted_date>\r\n <acceptance_date>\r\n <month>12</month>\r\n
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\ <day>28</day>\r\n <year>2016</year>\r\n </acceptance_date>\r\n
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\ <institution>\r\n <institution_name>bioRxiv</institution_name>\r\n
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\ </institution>\r\n <item_number item_number_type=\"pisa\">biorxiv;097196v1</item_number>\r\n
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\ <abstract>\r\n <p>This article presents a practical roadmap
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for scholarly data repositories to implement data citation in accordance with
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the Joint Declaration of Data Citation Principles (Data Citation Synthesis
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Group, 2014), a synopsis and harmonization of the recommendations of major
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science policy bodies. The roadmap was developed by the Repositories Early
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Adopters Expert Group, part of the Data Citation Implementation Pilot (DCIP)
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project (FORCE11, 2015), an initiative of FORCE11.org and the NIH BioCADDIE
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(2016) program. The roadmap makes 11 specific recommendations, grouped into
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three phases of implementation: a) required steps needed to support the Joint
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Declaration of Data Citation Principles, b) recommended steps that facilitate
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article/data publication workflows, and c) optional steps that further improve
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data citation support provided by data repositories.</p>\r\n </abstract>\r\n
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\ <doi_data>\r\n <doi>10.1101/097196</doi>\r\n <timestamp>2016122822100649000</timestamp>\r\n
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\ <resource>http://biorxiv.org/lookup/doi/10.1101/097196</resource>\r\n
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\ <collection property=\"crawler-based\">\r\n <item crawler=\"iParadigms\">\r\n
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\ <resource>https://syndication.highwire.org/content/doi/10.1101/097196</resource>\r\n
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\ </posted_content>\r\n </crossref>\r\n </doi_record>\r\n</doi_records>"
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http_version:
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recorded_at: Tue, 20 Jun 2017 06:48:35 GMT
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owner=\"10.1101\" timestamp=\"2016-12-29 01:10:20\">\r\n <crossref>\r\n
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\ <posted_content type=\"preprint\" language=\"en\" metadata_distribution_opts=\"any\">\r\n
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\ <group_title>Scientific Communication and Education</group_title>\r\n
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\ <contributors>\r\n <person_name contributor_role=\"author\"
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sequence=\"first\">\r\n <given_name>Martin</given_name>\r\n <surname>Fenner</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-1419-2405</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Merc?</given_name>\r\n <surname>Crosas</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-1304-1939</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Jeffrey</given_name>\r\n <surname>Grethe</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-5212-7052</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>David</given_name>\r\n <surname>Kennedy</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-9377-0797</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Henning</given_name>\r\n <surname>Hermjakob</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-8479-0262</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Philippe</given_name>\r\n <surname>Rocca-Serra</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-9853-5668</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Robin</given_name>\r\n <surname>Berjon</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-1731-5346</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Sebastian</given_name>\r\n <surname>Karcher</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0001-8249-7388</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Maryann</given_name>\r\n <surname>Martone</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0002-8406-3871</ORCID>\r\n </person_name>\r\n
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\ <person_name contributor_role=\"author\" sequence=\"additional\">\r\n
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\ <given_name>Timothy</given_name>\r\n <surname>Clark</surname>\r\n
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\ <ORCID>http://orcid.org/0000-0003-4060-7360</ORCID>\r\n </person_name>\r\n
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\ </contributors>\r\n <titles>\r\n <title>A Data Citation
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Roadmap for Scholarly Data Repositories</title>\r\n </titles>\r\n <posted_date>\r\n
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\ <month>12</month>\r\n <day>28</day>\r\n <year>2016</year>\r\n
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\ </posted_date>\r\n <acceptance_date>\r\n <month>12</month>\r\n
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\ <day>28</day>\r\n <year>2016</year>\r\n </acceptance_date>\r\n
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\ <institution>\r\n <institution_name>bioRxiv</institution_name>\r\n
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\ </institution>\r\n <item_number item_number_type=\"pisa\">biorxiv;097196v1</item_number>\r\n
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\ <abstract>\r\n <p>This article presents a practical roadmap
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for scholarly data repositories to implement data citation in accordance with
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the Joint Declaration of Data Citation Principles (Data Citation Synthesis
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Group, 2014), a synopsis and harmonization of the recommendations of major
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science policy bodies. The roadmap was developed by the Repositories Early
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Adopters Expert Group, part of the Data Citation Implementation Pilot (DCIP)
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project (FORCE11, 2015), an initiative of FORCE11.org and the NIH BioCADDIE
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(2016) program. The roadmap makes 11 specific recommendations, grouped into
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three phases of implementation: a) required steps needed to support the Joint
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Declaration of Data Citation Principles, b) recommended steps that facilitate
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article/data publication workflows, and c) optional steps that further improve
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data citation support provided by data repositories.</p>\r\n </abstract>\r\n
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\ <doi_data>\r\n <doi>10.1101/097196</doi>\r\n <timestamp>2016122822100649000</timestamp>\r\n
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87
|
+
\ <resource>http://biorxiv.org/lookup/doi/10.1101/097196</resource>\r\n
|
|
88
|
+
\ <collection property=\"crawler-based\">\r\n <item crawler=\"iParadigms\">\r\n
|
|
89
|
+
\ <resource>https://syndication.highwire.org/content/doi/10.1101/097196</resource>\r\n
|
|
90
|
+
\ </item>\r\n </collection>\r\n </doi_data>\r\n
|
|
91
|
+
\ </posted_content>\r\n </crossref>\r\n </doi_record>\r\n</doi_records>"
|
|
92
|
+
http_version:
|
|
93
|
+
recorded_at: Tue, 20 Jun 2017 06:48:35 GMT
|
|
94
|
+
recorded_with: VCR 3.0.3
|
data/spec/utils_spec.rb
CHANGED
|
@@ -38,12 +38,24 @@ describe Bolognese::Metadata, vcr: true do
|
|
|
38
38
|
expect(response).to eq("0000-0002-2590-225X")
|
|
39
39
|
end
|
|
40
40
|
|
|
41
|
+
it "validate_orcid https" do
|
|
42
|
+
orcid = "https://orcid.org/0000-0002-2590-225X"
|
|
43
|
+
response = subject.validate_orcid(orcid)
|
|
44
|
+
expect(response).to eq("0000-0002-2590-225X")
|
|
45
|
+
end
|
|
46
|
+
|
|
41
47
|
it "validate_orcid id" do
|
|
42
48
|
orcid = "0000-0002-2590-225X"
|
|
43
49
|
response = subject.validate_orcid(orcid)
|
|
44
50
|
expect(response).to eq("0000-0002-2590-225X")
|
|
45
51
|
end
|
|
46
52
|
|
|
53
|
+
it "validate_orcid www" do
|
|
54
|
+
orcid = "http://www.orcid.org/0000-0002-2590-225X"
|
|
55
|
+
response = subject.validate_orcid(orcid)
|
|
56
|
+
expect(response).to eq("0000-0002-2590-225X")
|
|
57
|
+
end
|
|
58
|
+
|
|
47
59
|
it "validate_orcid with spaces" do
|
|
48
60
|
orcid = "0000 0002 1394 3097"
|
|
49
61
|
response = subject.validate_orcid(orcid)
|
metadata
CHANGED
|
@@ -1,7 +1,7 @@
|
|
|
1
1
|
--- !ruby/object:Gem::Specification
|
|
2
2
|
name: bolognese
|
|
3
3
|
version: !ruby/object:Gem::Version
|
|
4
|
-
version: 0.9.
|
|
4
|
+
version: 0.9.25
|
|
5
5
|
platform: ruby
|
|
6
6
|
authors:
|
|
7
7
|
- Martin Fenner
|
|
@@ -684,9 +684,11 @@ files:
|
|
|
684
684
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/sanitize/should_remove_a_tags.yml
|
|
685
685
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/to_schema_org/with_id.yml
|
|
686
686
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid.yml
|
|
687
|
+
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_https.yml
|
|
687
688
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_id.yml
|
|
688
689
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_with_spaces.yml
|
|
689
690
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_wrong_id.yml
|
|
691
|
+
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_orcid/validate_orcid_www.yml
|
|
690
692
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/DOI.yml
|
|
691
693
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/ISSN.yml
|
|
692
694
|
- spec/fixtures/vcr_cassettes/Bolognese_Metadata/validate_url/URL.yml
|