bix 0.0.6 → 0.0.8
Sign up to get free protection for your applications and to get access to all the features.
- data/lib/bix/gtf.rb +7 -3
- metadata +2 -2
data/lib/bix/gtf.rb
CHANGED
@@ -13,10 +13,10 @@ module Bix
|
|
13
13
|
raise if @start < 1
|
14
14
|
@stop = f[4].to_i
|
15
15
|
raise if @stop < 1
|
16
|
-
@score = f[5]
|
16
|
+
@score = f[5]
|
17
17
|
@strand = f[6]
|
18
18
|
raise if @strand.size > 1
|
19
|
-
@frame = f[7]
|
19
|
+
@frame = f[7]
|
20
20
|
|
21
21
|
group = f[8]
|
22
22
|
|
@@ -68,7 +68,11 @@ module Bix
|
|
68
68
|
if i > 0
|
69
69
|
propstr << " "
|
70
70
|
end
|
71
|
-
|
71
|
+
if value.include?(" ")
|
72
|
+
propstr << "#{key} \"#{value}\";"
|
73
|
+
else
|
74
|
+
propstr << "#{key} #{value};"
|
75
|
+
end
|
72
76
|
i += 1
|
73
77
|
end
|
74
78
|
return [@chr, @prog, @feature, @start, @stop, @score, @strand, @frame, propstr].join("\t")
|
metadata
CHANGED
@@ -2,7 +2,7 @@
|
|
2
2
|
name: bix
|
3
3
|
version: !ruby/object:Gem::Version
|
4
4
|
prerelease:
|
5
|
-
version: 0.0.
|
5
|
+
version: 0.0.8
|
6
6
|
platform: ruby
|
7
7
|
authors:
|
8
8
|
- Jesse Rodriguez
|
@@ -10,7 +10,7 @@ autorequire:
|
|
10
10
|
bindir: bin
|
11
11
|
cert_chain: []
|
12
12
|
|
13
|
-
date:
|
13
|
+
date: 2013-01-21 00:00:00 Z
|
14
14
|
dependencies:
|
15
15
|
- !ruby/object:Gem::Dependency
|
16
16
|
name: swak
|