bioinform 0.1.9 → 0.1.10

checksums.yaml

@@ -0,0 +1,7 @@
+---
+SHA1:
+  metadata.gz: e8bc7b4338eb8a2d6cccf5871d7d85de1ad112f2
+  data.tar.gz: db3c7503656a2e0696ebf12a1259a9765864c50b
+SHA512:
+  metadata.gz: b16199a16c56a35dff87e5a36b300d90a0bef49b09b1179d7fada64cbf4db3725ce57c2ae51efff730860af0f4cfc62efdb33d6b405a7583a476b8e2fa413e32
+  data.tar.gz: 6ce68721c065e344f1da323a1c748f0e133c338f3c6f09b111b00fdb701dd49edcee2887fdaf3aef7e5c6b77044916944901ac91f0fd3387f842b798729de89a

data/lib/bioinform/data_models/collection.rb

@@ -59,7 +59,7 @@ module Bioinform
           container.each{|motif| yield( *args.map{|arg| motif.parameters.send(arg)} ) }
         end
       else
-        Enumerator.new(self, :each, *args)
+        self.to_enum(:each, *args)
       end
     end
 

data/lib/bioinform/data_models/pm.rb

@@ -69,7 +69,7 @@ module Bioinform
       if block_given?
         matrix.each{|pos| yield pos}
       else
-        Enumerator.new(self, :each_position)
+        self.to_enum(:each_position)
       end
     end
 

data/lib/bioinform/parsers/splittable_parser.rb

@@ -15,7 +15,7 @@ module Bioinform
         if block_given?
           yield self
         else
-          Enumerator.new(self, :each)
+          self.to_enum(:each)
         end
       end
     end
@@ -47,7 +47,7 @@ module Bioinform
             yield result
           end
         else
-          Enumerator.new(self, :each)
+          self.to_enum(:each)
         end
       end
 

data/lib/bioinform/version.rb

@@ -1,3 +1,3 @@
 module Bioinform
-  VERSION = "0.1.9"
+  VERSION = "0.1.10"
 end

metadata

@@ -1,36 +1,32 @@
 --- !ruby/object:Gem::Specification
 name: bioinform
 version: !ruby/object:Gem::Version
-  version: 0.1.9
-  prerelease: 
+  version: 0.1.10
 platform: ruby
 authors:
 - Ilya Vorontsov
 autorequire: 
 bindir: bin
 cert_chain: []
-date: 2012-12-07 00:00:00.000000000 Z
+date: 2013-04-29 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: activesupport
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: 3.0.0
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: 3.0.0
 - !ruby/object:Gem::Dependency
   name: docopt
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - '='
       - !ruby/object:Gem::Version
@@ -38,7 +34,6 @@ dependencies:
   type: :runtime
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - '='
       - !ruby/object:Gem::Version
@@ -46,7 +41,6 @@ dependencies:
 - !ruby/object:Gem::Dependency
   name: fakefs
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - ~>
       - !ruby/object:Gem::Version
@@ -54,7 +48,6 @@ dependencies:
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - ~>
       - !ruby/object:Gem::Version
@@ -62,7 +55,6 @@ dependencies:
 - !ruby/object:Gem::Dependency
   name: fabrication
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - ~>
       - !ruby/object:Gem::Version
@@ -70,7 +62,6 @@ dependencies:
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
     - - ~>
       - !ruby/object:Gem::Version
@@ -78,33 +69,29 @@ dependencies:
 - !ruby/object:Gem::Dependency
   name: rspec
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: '2.0'
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: '2.0'
 - !ruby/object:Gem::Dependency
   name: rspec-given
   requirement: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: 2.0.0
   type: :development
   prerelease: false
   version_requirements: !ruby/object:Gem::Requirement
-    none: false
     requirements:
-    - - ! '>='
+    - - '>='
       - !ruby/object:Gem::Version
         version: 2.0.0
 description: A bunch of useful classes for bioinformatics
@@ -231,27 +218,26 @@ files:
 - spec/support/same_by_spec.rb
 homepage: ''
 licenses: []
+metadata: {}
 post_install_message: 
 rdoc_options: []
 require_paths:
 - lib
 required_ruby_version: !ruby/object:Gem::Requirement
-  none: false
   requirements:
-  - - ! '>='
+  - - '>='
     - !ruby/object:Gem::Version
       version: '0'
 required_rubygems_version: !ruby/object:Gem::Requirement
-  none: false
   requirements:
-  - - ! '>='
+  - - '>='
     - !ruby/object:Gem::Version
       version: '0'
 requirements: []
 rubyforge_project: 
-rubygems_version: 1.8.24
+rubygems_version: 2.0.3
 signing_key: 
-specification_version: 3
+specification_version: 4
 summary: Classes for work with different input formats of positional matrices and
   IUPAC-words and making simple transform and statistics with them. Also module includes
   several useful extensions for Enumerable module like parametric map and callable
@@ -315,3 +301,4 @@ test_files:
 - spec/support/multiline_squish_spec.rb
 - spec/support/partial_sums_spec.rb
 - spec/support/same_by_spec.rb
+has_rdoc: