bioinform 0.1.0 → 0.1.1

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data/bioinform.gemspec CHANGED
@@ -15,7 +15,7 @@ Gem::Specification.new do |gem|
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  gem.require_paths = ["lib"]
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  gem.version = Bioinform::VERSION
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- gem.add_dependency('active_support', '~> 3.0.0')
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+ gem.add_dependency('activesupport', '>= 3.0.0')
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- gem.add_development_dependency "rspec", "~> 2.0"
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+ gem.add_development_dependency "rspec", ">= 2.0"
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  end
@@ -2,7 +2,7 @@ require 'bioinform/support'
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  module Bioinform
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  class PM
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- attr_reader :matrix
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+ attr_reader :matrix, :background
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  attr_accessor :name
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  def initialize(input = nil, parser = nil)
@@ -14,6 +14,10 @@ module Bioinform
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  matrix_init
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  end
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+ def ==(other)
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+ @matrix == other.matrix && @background == other.background
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+ end
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+
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  def parser_init
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  if @parser
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  raise ArgumentError, 'Input cannot be parsed by specified parser' unless @parser.new(@input).can_parse?
@@ -1,3 +1,3 @@
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  module Bioinform
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- VERSION = "0.1.0"
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+ VERSION = "0.1.1"
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  end
metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: bioinform
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  version: !ruby/object:Gem::Version
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- version: 0.1.0
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+ version: 0.1.1
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  prerelease:
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  platform: ruby
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  authors:
@@ -9,14 +9,14 @@ authors:
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  autorequire:
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  bindir: bin
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  cert_chain: []
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- date: 2012-06-20 00:00:00.000000000 Z
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+ date: 2012-06-27 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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- name: active_support
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+ name: activesupport
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  requirement: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ~>
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+ - - ! '>='
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  - !ruby/object:Gem::Version
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  version: 3.0.0
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  type: :runtime
@@ -24,7 +24,7 @@ dependencies:
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  version_requirements: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ~>
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+ - - ! '>='
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  - !ruby/object:Gem::Version
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  version: 3.0.0
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  - !ruby/object:Gem::Dependency
@@ -32,7 +32,7 @@ dependencies:
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  requirement: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ~>
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+ - - ! '>='
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  - !ruby/object:Gem::Version
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  version: '2.0'
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  type: :development
@@ -40,7 +40,7 @@ dependencies:
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  version_requirements: !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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- - - ~>
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+ - - ! '>='
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  - !ruby/object:Gem::Version
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  version: '2.0'
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  description: A bunch of useful classes for bioinformatics