bio-polyploid-tools 0.8.2 → 0.8.3

checksums.yaml

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data/.travis.yml

@@ -7,6 +7,8 @@ addons:
     - libncurses5-dev
     - libtinfo-dev 
     - exonerate  
+before_install:
+  - gem update --system
 rvm:
   - 2.1.10
   - 2.2.5

data/README.md

@@ -128,6 +128,11 @@ To use blast instead of exonerate, use the following command:
 
 ## Release Notes
 
+### 0.8.3
+
+* BUGFIX: ```ChromosomeArm.rb``` was fixed to conform the module assumptions for the package. 
+
+
 ### 0.8.2
 
 * FEATURE: The functions to select the chromosome arm are now in ```lib/bio/PolyploidTools/ChromosomeArm.rb``` and the help message is updated automatically with the valid options. 

data/VERSION

@@ -1 +1 @@
-0.8.2
+0.8.3

data/bio-polyploid-tools.gemspec

@@ -2,11 +2,11 @@
 # DO NOT EDIT THIS FILE DIRECTLY
 # Instead, edit Juwelier::Tasks in Rakefile, and run 'rake gemspec'
 # -*- encoding: utf-8 -*-
-# stub: bio-polyploid-tools 0.8.2 ruby lib
+# stub: bio-polyploid-tools 0.8.3 ruby lib
 
 Gem::Specification.new do |s|
   s.name = "bio-polyploid-tools".freeze
-  s.version = "0.8.2"
+  s.version = "0.8.3"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0".freeze) if s.respond_to? :required_rubygems_version=
   s.require_paths = ["lib".freeze]

data/lib/bio/PolyploidTools/ChromosomeArm.rb

@@ -1,4 +1,5 @@
-class Bio::PolyploidTools::ChromosomeArm
+module Bio::PolyploidTools
+class ChromosomeArm
 
 
 
@@ -47,5 +48,5 @@ class Bio::PolyploidTools::ChromosomeArm
   def self.getValidFunctions
     @@arm_selection_functions.keys.map { |e| e.to_s }
   end
-
+end
 end

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: bio-polyploid-tools
 version: !ruby/object:Gem::Version
-  version: 0.8.2
+  version: 0.8.3
 platform: ruby
 authors:
 - Ricardo H.  Ramirez-Gonzalez