bio-gem 0.2.1 → 0.2.2
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- data/VERSION +1 -1
- data/bio-gem.gemspec +2 -2
- data/lib/bio-gem/mod/jeweler.rb +7 -3
- data/lib/bio-gem/templates/bin +3 -15
- metadata +4 -4
data/VERSION
CHANGED
@@ -1 +1 @@
|
|
1
|
-
0.2.
|
1
|
+
0.2.2
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data/bio-gem.gemspec
CHANGED
@@ -5,11 +5,11 @@
|
|
5
5
|
|
6
6
|
Gem::Specification.new do |s|
|
7
7
|
s.name = %q{bio-gem}
|
8
|
-
s.version = "0.2.
|
8
|
+
s.version = "0.2.2"
|
9
9
|
|
10
10
|
s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
|
11
11
|
s.authors = ["Raoul J.P. Bonnal"]
|
12
|
-
s.date = %q{2011-
|
12
|
+
s.date = %q{2011-02-09}
|
13
13
|
s.default_executable = %q{biogem}
|
14
14
|
s.description = %q{BioGem is a scaffold generator for those Bioinformaticans who want to start coding an application or a library for using/extending BioRuby core library and sharing it through rubygems.org .
|
15
15
|
The basic idea is to simplify and promote a modular approach to the BioRuby package.}
|
data/lib/bio-gem/mod/jeweler.rb
CHANGED
@@ -40,7 +40,7 @@ class Jeweler
|
|
40
40
|
def bin_dir
|
41
41
|
'bin'
|
42
42
|
end
|
43
|
-
|
43
|
+
|
44
44
|
def bin_name
|
45
45
|
"bio#{original_project_name}"
|
46
46
|
end
|
@@ -72,8 +72,12 @@ class Jeweler
|
|
72
72
|
#the options are defined in mod/jeweler/options.rb
|
73
73
|
def create_files
|
74
74
|
original_create_files
|
75
|
-
|
76
|
-
|
75
|
+
|
76
|
+
if options[:biogem_test_data]
|
77
|
+
mkdir_in_target("test") unless File.exists? "#{target_dir}/test"
|
78
|
+
mkdir_in_target test_data_dir
|
79
|
+
end
|
80
|
+
mkdir_in_target(db_dir) if options[:biogem_db]
|
77
81
|
if options[:biogem_bin]
|
78
82
|
mkdir_in_target bin_dir
|
79
83
|
output_template_in_target_generic 'bin', File.join(bin_dir, bin_name)
|
data/lib/bio-gem/templates/bin
CHANGED
@@ -1,24 +1,12 @@
|
|
1
1
|
#!/usr/bin/env ruby
|
2
2
|
#
|
3
|
-
# <%=
|
4
|
-
#
|
3
|
+
# BioRuby <%= project_name %> Plugin
|
4
|
+
# Version 0.0.0
|
5
5
|
# Author:: <%= user_name %>
|
6
6
|
# Copyright:: <%= Time.now.year %>
|
7
7
|
# License:: The Ruby License
|
8
|
-
#
|
9
|
-
|
10
|
-
USAGE = <<EOM
|
11
|
-
|
12
|
-
Describe <%= bin_name %>
|
13
|
-
|
14
|
-
EOM
|
15
|
-
|
16
|
-
rootpath = File.dirname(File.dirname(__FILE__))
|
17
|
-
$: << File.join(rootpath,'lib')
|
18
|
-
|
19
|
-
PROJECT_VERSION = File.new(File.join(rootpath,'VERSION')).read.chomp
|
20
8
|
|
21
|
-
|
9
|
+
USAGE = "Describe <%= bin_name %>"
|
22
10
|
|
23
11
|
if ARGV.size == 0
|
24
12
|
print USAGE
|
metadata
CHANGED
@@ -5,8 +5,8 @@ version: !ruby/object:Gem::Version
|
|
5
5
|
segments:
|
6
6
|
- 0
|
7
7
|
- 2
|
8
|
-
-
|
9
|
-
version: 0.2.
|
8
|
+
- 2
|
9
|
+
version: 0.2.2
|
10
10
|
platform: ruby
|
11
11
|
authors:
|
12
12
|
- Raoul J.P. Bonnal
|
@@ -14,7 +14,7 @@ autorequire:
|
|
14
14
|
bindir: bin
|
15
15
|
cert_chain: []
|
16
16
|
|
17
|
-
date: 2011-
|
17
|
+
date: 2011-02-09 00:00:00 +01:00
|
18
18
|
default_executable: biogem
|
19
19
|
dependencies:
|
20
20
|
- !ruby/object:Gem::Dependency
|
@@ -116,7 +116,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
|
|
116
116
|
requirements:
|
117
117
|
- - ">="
|
118
118
|
- !ruby/object:Gem::Version
|
119
|
-
hash:
|
119
|
+
hash: 3133852585344624584
|
120
120
|
segments:
|
121
121
|
- 0
|
122
122
|
version: "0"
|