bio-faster 0.4.3 → 0.4.4

data/VERSION

@@ -1 +1 @@
-0.4.3
+0.4.4

data/bio-faster.gemspec

@@ -5,7 +5,7 @@
 
 Gem::Specification.new do |s|
   s.name = "bio-faster"
-  s.version = "0.4.3"
+  s.version = "0.4.4"
 
   s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
   s.authors = ["Francesco Strozzi"]

data/spec/parser_spec.rb

@@ -42,24 +42,6 @@ describe Bio::Faster do
 
     end
 
-    it "can read also gzipped FastQ files" do
-      gz_files = Dir.glob(TEST_DATA+"/formats/gzipped/*.fastq.gz").sort
-      gz_seq = []
-      gz_files.each do |file|
-        Bio::Faster.new(file).each_record do |seq|
-           gz_seq << seq
-        end    
-      end
-      files = Dir.glob(TEST_DATA+"/formats/gzipped/*.fastq").sort
-      norm_seq = []
-      files.each do |file|
-        Bio::Faster.new(file).each_record do |seq|
-           norm_seq << seq
-        end    
-      end
-      gz_seq.should == norm_seq
-    end
-
 
     it "can read from the standard input" do
       require 'digest/md5'

metadata

@@ -1,7 +1,7 @@
 --- !ruby/object:Gem::Specification
 name: bio-faster
 version: !ruby/object:Gem::Version
-  version: 0.4.3
+  version: 0.4.4
   prerelease: 
 platform: ruby
 authors:
@@ -13,7 +13,7 @@ date: 2012-04-27 00:00:00.000000000 Z
 dependencies:
 - !ruby/object:Gem::Dependency
   name: ffi
-  requirement: &2157623240 !ruby/object:Gem::Requirement
+  requirement: &2154695320 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -21,10 +21,10 @@ dependencies:
         version: '0'
   type: :runtime
   prerelease: false
-  version_requirements: *2157623240
+  version_requirements: *2154695320
 - !ruby/object:Gem::Dependency
   name: shoulda
-  requirement: &2157622320 !ruby/object:Gem::Requirement
+  requirement: &2154694220 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -32,10 +32,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *2157622320
+  version_requirements: *2154694220
 - !ruby/object:Gem::Dependency
   name: bundler
-  requirement: &2157621820 !ruby/object:Gem::Requirement
+  requirement: &2154693120 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -43,10 +43,10 @@ dependencies:
         version: 1.0.0
   type: :development
   prerelease: false
-  version_requirements: *2157621820
+  version_requirements: *2154693120
 - !ruby/object:Gem::Dependency
   name: jeweler
-  requirement: &2157621200 !ruby/object:Gem::Requirement
+  requirement: &2154691040 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ~>
@@ -54,10 +54,10 @@ dependencies:
         version: 1.6.4
   type: :development
   prerelease: false
-  version_requirements: *2157621200
+  version_requirements: *2154691040
 - !ruby/object:Gem::Dependency
   name: rcov
-  requirement: &2157620460 !ruby/object:Gem::Requirement
+  requirement: &2154704820 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -65,10 +65,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *2157620460
+  version_requirements: *2154704820
 - !ruby/object:Gem::Dependency
   name: bio
-  requirement: &2157619740 !ruby/object:Gem::Requirement
+  requirement: &2154702860 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -76,10 +76,10 @@ dependencies:
         version: 1.4.2
   type: :development
   prerelease: false
-  version_requirements: *2157619740
+  version_requirements: *2154702860
 - !ruby/object:Gem::Dependency
   name: rspec
-  requirement: &2157619000 !ruby/object:Gem::Requirement
+  requirement: &2154701200 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -87,10 +87,10 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *2157619000
+  version_requirements: *2154701200
 - !ruby/object:Gem::Dependency
   name: ffi
-  requirement: &2157618200 !ruby/object:Gem::Requirement
+  requirement: &2154699060 !ruby/object:Gem::Requirement
     none: false
     requirements:
     - - ! '>='
@@ -98,7 +98,7 @@ dependencies:
         version: '0'
   type: :development
   prerelease: false
-  version_requirements: *2157618200
+  version_requirements: *2154699060
 description: A fast parser for FastQ files
 email: francesco.strozzi@gmail.com
 executables: []
@@ -182,7 +182,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
       version: '0'
       segments:
       - 0
-      hash: -1208999662832865297
+      hash: -2874746173653094102
 required_rubygems_version: !ruby/object:Gem::Requirement
   none: false
   requirements: