bio-faster 0.4.3 → 0.4.4

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Files changed (4) hide show
  1. data/VERSION +1 -1
  2. data/bio-faster.gemspec +1 -1
  3. data/spec/parser_spec.rb +0 -18
  4. metadata +18 -18
data/VERSION CHANGED
@@ -1 +1 @@
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- 0.4.3
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+ 0.4.4
data/bio-faster.gemspec CHANGED
@@ -5,7 +5,7 @@
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  Gem::Specification.new do |s|
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  s.name = "bio-faster"
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- s.version = "0.4.3"
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+ s.version = "0.4.4"
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  s.required_rubygems_version = Gem::Requirement.new(">= 0") if s.respond_to? :required_rubygems_version=
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  s.authors = ["Francesco Strozzi"]
data/spec/parser_spec.rb CHANGED
@@ -42,24 +42,6 @@ describe Bio::Faster do
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  end
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- it "can read also gzipped FastQ files" do
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- gz_files = Dir.glob(TEST_DATA+"/formats/gzipped/*.fastq.gz").sort
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- gz_seq = []
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- gz_files.each do |file|
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- Bio::Faster.new(file).each_record do |seq|
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- gz_seq << seq
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- end
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- end
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- files = Dir.glob(TEST_DATA+"/formats/gzipped/*.fastq").sort
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- norm_seq = []
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- files.each do |file|
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- Bio::Faster.new(file).each_record do |seq|
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- norm_seq << seq
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- end
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- end
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- gz_seq.should == norm_seq
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- end
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-
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  it "can read from the standard input" do
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  require 'digest/md5'
metadata CHANGED
@@ -1,7 +1,7 @@
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  --- !ruby/object:Gem::Specification
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  name: bio-faster
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  version: !ruby/object:Gem::Version
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- version: 0.4.3
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+ version: 0.4.4
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  prerelease:
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  platform: ruby
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  authors:
@@ -13,7 +13,7 @@ date: 2012-04-27 00:00:00.000000000 Z
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  dependencies:
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  - !ruby/object:Gem::Dependency
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  name: ffi
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- requirement: &2157623240 !ruby/object:Gem::Requirement
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+ requirement: &2154695320 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -21,10 +21,10 @@ dependencies:
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  version: '0'
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  type: :runtime
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  prerelease: false
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- version_requirements: *2157623240
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+ version_requirements: *2154695320
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  - !ruby/object:Gem::Dependency
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  name: shoulda
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- requirement: &2157622320 !ruby/object:Gem::Requirement
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+ requirement: &2154694220 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -32,10 +32,10 @@ dependencies:
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  version: '0'
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  type: :development
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  prerelease: false
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- version_requirements: *2157622320
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+ version_requirements: *2154694220
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  - !ruby/object:Gem::Dependency
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  name: bundler
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- requirement: &2157621820 !ruby/object:Gem::Requirement
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+ requirement: &2154693120 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ~>
@@ -43,10 +43,10 @@ dependencies:
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  version: 1.0.0
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  type: :development
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  prerelease: false
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- version_requirements: *2157621820
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+ version_requirements: *2154693120
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  - !ruby/object:Gem::Dependency
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  name: jeweler
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- requirement: &2157621200 !ruby/object:Gem::Requirement
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+ requirement: &2154691040 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ~>
@@ -54,10 +54,10 @@ dependencies:
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  version: 1.6.4
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  type: :development
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  prerelease: false
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- version_requirements: *2157621200
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+ version_requirements: *2154691040
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  - !ruby/object:Gem::Dependency
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  name: rcov
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- requirement: &2157620460 !ruby/object:Gem::Requirement
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+ requirement: &2154704820 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -65,10 +65,10 @@ dependencies:
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  version: '0'
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  type: :development
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  prerelease: false
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- version_requirements: *2157620460
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+ version_requirements: *2154704820
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  - !ruby/object:Gem::Dependency
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  name: bio
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- requirement: &2157619740 !ruby/object:Gem::Requirement
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+ requirement: &2154702860 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -76,10 +76,10 @@ dependencies:
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  version: 1.4.2
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  type: :development
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  prerelease: false
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- version_requirements: *2157619740
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+ version_requirements: *2154702860
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  - !ruby/object:Gem::Dependency
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  name: rspec
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- requirement: &2157619000 !ruby/object:Gem::Requirement
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+ requirement: &2154701200 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -87,10 +87,10 @@ dependencies:
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  version: '0'
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  type: :development
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  prerelease: false
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- version_requirements: *2157619000
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+ version_requirements: *2154701200
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  - !ruby/object:Gem::Dependency
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  name: ffi
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- requirement: &2157618200 !ruby/object:Gem::Requirement
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+ requirement: &2154699060 !ruby/object:Gem::Requirement
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  none: false
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  requirements:
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  - - ! '>='
@@ -98,7 +98,7 @@ dependencies:
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  version: '0'
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  type: :development
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  prerelease: false
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- version_requirements: *2157618200
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+ version_requirements: *2154699060
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  description: A fast parser for FastQ files
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  email: francesco.strozzi@gmail.com
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  executables: []
@@ -182,7 +182,7 @@ required_ruby_version: !ruby/object:Gem::Requirement
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  version: '0'
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  segments:
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  - 0
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- hash: -1208999662832865297
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+ hash: -2874746173653094102
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  required_rubygems_version: !ruby/object:Gem::Requirement
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  none: false
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  requirements: